TSC2 - TSC complex subunit 2

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: no matching PDB entities View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P49815 HGNC Approved Gene Symbol: TSC2 
Previous Symbols: TSC4 Ensembl ENSG00000103197 
Synonyms : tuberin, LAM, PPP1R160 Previous Names: "tuberous sclerosis 2"
HgncId : HGNC:12363  Omim: 191092 
Refseq: NM_000548  GenBank: AB014460 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TSC2 Gene Structure

Chromosome: chr16
Genbank ID: NM_000548 Orientation: +
Length coding sequence : 5421 nucleotides.
Regionstartendregion lengthphase at end
UTR2,098,5872,098,616
Exon2,098,6172,098,7541380
Exon2,100,4012,100,487870
Exon2,103,3432,103,4531110
Exon2,104,2972,104,4411451
Exon2,105,4032,105,5201182
Exon2,106,1972,106,245490
Exon2,106,6452,106,7701260
Exon2,107,1062,107,179742
Exon2,108,7482,108,8741270
Exon2,110,6712,110,8141440
Exon2,111,8722,112,0091380
Exon2,112,4982,112,6011042
Exon2,112,9732,113,054820
Exon2,114,2732,114,4281560
Exon2,115,5202,115,6361170
Exon2,120,4572,120,5791230
Exon2,121,5112,121,6171072
Exon2,121,7852,121,9351510
Exon2,122,2422,122,3641230
Exon2,122,8502,122,9841350
Exon2,124,2012,124,3901901
Exon2,125,8002,125,893942
Exon2,126,0692,126,1711030
Exon2,126,4922,126,586952
Exon2,127,5992,127,7271292
Exon2,129,0332,129,1971652
Exon2,129,2772,129,4291532
Exon2,129,5582,129,6701131
Exon2,130,1662,130,3782131
Exon2,131,5962,131,7992041
Exon2,132,4372,132,505691
Exon2,133,6962,133,8171220
Exon2,134,2292,134,7164882
Exon2,134,9522,135,027760
Exon2,135,2312,135,323930
Exon2,136,1942,136,3801871
Exon2,136,7332,136,8721400
Exon2,137,8642,137,942791
Exon2,138,0492,138,140920
Exon2,138,2282,138,326990
Exon2,138,4472,138,6111650
UTR2,138,6122,138,721