TRIM25 - tripartite motif containing 25

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q14258 HGNC Approved Gene Symbol: TRIM25 
Previous Symbols: ZNF147 Ensembl ENSG00000121060 
Synonyms : EFP, RNF147 Previous Names: "zinc finger protein 147 (estrogen-responsive finger protein)", "tripartite motif-containing 25"
HgncId : HGNC:12932  Omim: 600453 
Refseq: NM_005082  GenBank: D21205 
 
Genomic coordinates: Cytogenetic location: 17q23.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TRIM25 Gene Structure

Chromosome: chr17
Genbank ID: NM_005082 Orientation: -
Length coding sequence : 1890 nucleotides.
Regionstartendregion lengthphase at end
UTR
54,991,35054,991,409
Exon54,990,75354,991,3495970
Exon54,985,82954,985,924960
Exon54,981,61654,981,8492340
Exon54,978,78054,978,9391601
Exon54,976,47654,976,541661
Exon54,973,28754,973,313271
Exon54,972,88254,972,965841
Exon54,972,70454,972,802991
Exon54,969,06154,969,5905300
UTR
54,965,27054,969,060