TLR4 - toll like receptor 4

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 12 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O00206 HGNC Approved Gene Symbol: TLR4 
Ensembl ENSG00000136869 
Synonyms : hToll, CD284, TLR-4, ARMD10 Previous Names: "toll-like receptor 4"
HgncId : HGNC:11850  Omim: 603030 
Refseq: NM_138554  GenBank: U88880 
 
Genomic coordinates: Cytogenetic location: 9q33.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TLR4 Gene Structure

Chromosome: chr9
Genbank ID: NM_138554 Orientation: +
Length coding sequence : 2517 nucleotides.
Regionstartendregion lengthphase at end
UTR120,466,452120,466,750
Exon120,466,751120,466,843930
Exon120,470,841120,471,0071672
Exon120,474,667120,476,92622600
UTR120,476,927120,479,769