THSD4 - thrombospondin type 1 domain containing 4

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

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Cross References
UniProt: Q6ZMP0 HGNC Approved Gene Symbol: THSD4 
Ensembl ENSG00000187720 
Synonyms : FVSY9334, PRO34005, FLJ13710, ADAMTSL6
HgncId : HGNC:25835  Omim: 614476 
Refseq: NM_024817  GenBank: AK023772 
 
Genomic coordinates: Cytogenetic location: 15q23 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

THSD4 Gene Structure

Chromosome: chr15
Genbank ID: NM_024817 Orientation: +
Length coding sequence : 3054 nucleotides.
Regionstartendregion lengthphase at end
UTR71,433,78771,433,866
Exon71,433,86771,433,895292
Exon71,447,20271,447,271700
Exon71,507,37471,507,7383652
Exon71,534,98871,535,4354480
Exon71,548,95271,549,0541031
Exon71,704,02671,704,1621370
Exon71,952,86971,953,0732051
Exon72,020,88872,021,0631760
Exon72,023,46072,023,556971
Exon72,030,07172,030,3462761
Exon72,037,44572,037,5741302
Exon72,039,17772,039,3812050
Exon72,040,76072,040,9331740
Exon72,050,24172,050,4141740
Exon72,057,35972,057,5381800
Exon72,063,40372,063,5471451
Exon72,069,57172,069,7131430
UTR72,069,71472,075,722