SND1 - staphylococcal nuclease and tudor domain containing 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 10 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q7KZF4 HGNC Approved Gene Symbol: SND1 
Ensembl ENSG00000197157 
Synonyms : TDRD11, p100
HgncId : HGNC:30646  Omim: 602181 
Refseq: NM_014390 
 
Genomic coordinates: Cytogenetic location: 7q32.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SND1 Gene Structure

Chromosome: chr7
Genbank ID: NM_014390 Orientation: +
Length coding sequence : 2730 nucleotides.
Regionstartendregion lengthphase at end
UTR127,292,201127,292,427
Exon127,292,428127,292,505780
Exon127,326,667127,326,8161500
Exon127,334,882127,335,0021211
Exon127,338,929127,339,007792
Exon127,341,217127,341,3771611
Exon127,342,489127,342,580920
Exon127,343,219127,343,3771590
Exon127,344,893127,344,9991072
Exon127,347,611127,347,701910
Exon127,361,341127,361,4541140
Exon127,447,538127,447,627900
Exon127,484,377127,484,4771012
Exon127,527,955127,528,0651112
Exon127,544,800127,544,872730
Exon127,569,241127,569,3821421
Exon127,631,000127,631,1091100
Exon127,714,554127,714,7421890
Exon127,721,412127,721,5531421
Exon127,724,776127,724,8991242
Exon127,725,763127,725,832700
Exon127,726,990127,727,1031140
Exon127,729,541127,729,7442040
Exon127,731,889127,731,933450
Exon127,732,045127,732,110660
UTR127,732,111127,732,659