SET - SET nuclear proto-oncogene

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q01105 HGNC Approved Gene Symbol: SET 
Ensembl ENSG00000119335 
Synonyms : PHAPII, 2PP2A, IPP2A2 Previous Names: "SET translocation (myeloid leukemia-associated)"
HgncId : HGNC:10760  Omim: 600960 
Refseq: NM_001122821  GenBank: M93651 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SET Gene Structure

Chromosome: chr9
Genbank ID: NM_001122821 Orientation: +
Length coding sequence : 870 nucleotides.
Regionstartendregion lengthphase at end
UTR131,445,933131,446,174
Exon131,446,175131,446,2861121
Exon131,453,449131,453,506582
Exon131,454,137131,454,2791431
Exon131,454,941131,455,0441040
Exon131,455,147131,455,2601140
Exon131,455,917131,456,0871710
Exon131,456,175131,456,3211470
Exon131,456,920131,456,943240
UTR131,456,944131,458,675