ROBO1 - roundabout guidance receptor 1

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 12 View list of all current human gene IDs
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Cross References
UniProt: Q9Y6N7 HGNC Approved Gene Symbol: ROBO1 
Ensembl ENSG00000169855 
Synonyms : DUTT1, FLJ21882, SAX3 Previous Names: "roundabout (axon guidance receptor, Drosophila) homolog 1", "roundabout, axon guidance receptor, homolog 1 (Drosophila)"
HgncId : HGNC:10249  Omim: 602430 
Refseq: NM_002941  GenBank: AF040990 
 
Genomic coordinates: Cytogenetic location: 3p12.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

ROBO1 Gene Structure

Chromosome: chr3
Genbank ID: NM_002941 Orientation: -
Length coding sequence : 4953 nucleotides.
Regionstartendregion lengthphase at end
UTR79,816,90179,817,059
UTR
79,639,06279,639,111
Exon79,638,97479,639,061881
Exon79,174,60679,174,689841
Exon78,987,75178,988,0773271
Exon78,795,89378,796,0501580
Exon78,766,91378,767,0331211
Exon78,766,42578,766,5631392
Exon78,763,54778,763,6741281
Exon78,737,79878,737,9221250
Exon78,734,89678,735,0671721
Exon78,719,24678,719,4512060
Exon78,717,63478,717,715821
Exon78,717,28478,717,4521692
Exon78,717,03378,717,1991671
Exon78,711,14378,711,2641220
Exon78,710,18078,710,4112321
Exon78,708,83678,708,9571220
Exon78,706,24878,706,4191721
Exon78,700,88278,701,0791981
Exon78,696,77978,696,805271
Exon78,695,29878,695,340432
Exon78,688,89478,689,0481551
Exon78,684,92378,685,2583361
Exon78,683,08578,683,1921081
Exon78,680,31178,680,4551452
Exon78,676,47178,676,7192492
Exon78,666,78578,667,1914071
Exon78,663,79878,663,9501531
Exon78,655,88378,656,1913091
Exon78,649,26378,649,4591970
Exon78,648,06378,648,077150
UTR
78,646,38878,648,062