RBPJ - recombination signal binding protein for immunoglobulin kappa J region

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q06330  HGNC Approved Gene Symbol: RBPJ 
Previous Symbols: IGKJRB1, RBPSUH Ensembl ENSG00000168214 
Synonyms : SUH, IGKJRB, RBPJK, KBF2, RBP-J, CBF1 Previous Names: "recombining binding protein suppressor of hairless (Drosophila)"
HgncId : HGNC:5724  Omim: 147183 
Refseq: NM_015874  GenBank: L07872 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

RBPJ Gene Structure

Chromosome: chr4
Genbank ID: NM_015874 Orientation: +
Length coding sequence : 1461 nucleotides.
Regionstartendregion lengthphase at end
UTR26,322,42826,322,650
Exon26,322,65126,322,670202
Exon26,387,97526,388,013392
Exon26,407,79726,407,892962
Exon26,417,09726,417,2621660
Exon26,422,17326,422,3471751
Exon26,425,96426,426,1011381
Exon26,426,25326,426,3651130
Exon26,430,34226,430,4821410
Exon26,431,52026,431,6751560
Exon26,432,04126,432,1441042
Exon26,432,31426,432,6293160
UTR26,432,63026,436,752