PTGS2 - prostaglandin-endoperoxide synthase 2

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for PTGS2 View list of all current human gene IDs
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Cross References
UniProt: P35354 HGNC Approved Gene Symbol: PTGS2 
Ensembl ENSG00000073756 
Synonyms : COX2 Previous Names: "prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)"
HgncId : HGNC:9605  Omim: 600262 
Refseq: NM_000963  GenBank: D28235 
 
Genomic coordinates: Cytogenetic location: 1q31.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PTGS2 Gene Structure

Chromosome: chr1
Genbank ID: NM_000963 Orientation: -
Length coding sequence : 1812 nucleotides.
Regionstartendregion lengthphase at end
UTR
186,680,291186,680,427
Exon186,680,239186,680,290521
Exon186,679,322186,679,4381171
Exon186,679,058186,679,2011441
Exon186,678,261186,678,4041441
Exon186,677,649186,677,8301820
Exon186,676,833186,676,916840
Exon186,676,467186,676,7132471
Exon186,675,898186,676,1842870
Exon186,675,249186,675,3961481
Exon186,674,353186,674,7624100
UTR
186,671,812186,674,352