POU2F1 - POU class 2 homeobox 1

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for POU2F1 View list of all current human gene IDs
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Cross References
UniProt: P14859 HGNC Approved Gene Symbol: POU2F1 
Previous Symbols: OTF1 Ensembl ENSG00000143190 
Synonyms : OCT1 Previous Names: "POU domain class 2, transcription factor 1"
HgncId : HGNC:9212  Omim: 164175 
Refseq: NM_002697  GenBank: BC001664 
 
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

POU2F1 Gene Structure

Chromosome: chr1
Genbank ID: NM_002697 Orientation: +
Length coding sequence : 2298 nucleotides.
Regionstartendregion lengthphase at end
UTR167,190,065167,190,134
Exon167,190,135167,190,195611
Exon167,301,707167,301,772661
Exon167,334,704167,334,8041010
Exon167,339,398167,339,451540
Exon167,341,154167,341,2731200
Exon167,343,345167,343,5331890
Exon167,345,266167,345,3921271
Exon167,353,094167,353,188950
Exon167,358,825167,358,9981740
Exon167,365,523167,365,6641421
Exon167,367,231167,367,3701400
Exon167,368,423167,368,6021800
Exon167,370,688167,370,7931061
Exon167,381,196167,381,5413462
Exon167,382,263167,382,351891
Exon167,384,737167,385,0473110
UTR167,385,048167,396,582