PDGFRB - platelet derived growth factor receptor beta

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for PDGFRB View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P09619 HGNC Approved Gene Symbol: PDGFRB 
Previous Symbols: PDGFR Ensembl ENSG00000113721 
Synonyms : JTK12, CD140b, PDGFR1 Previous Names: "platelet-derived growth factor receptor, beta polypeptide"
HgncId : HGNC:8804  Omim: 173410 
Refseq: NM_002609  GenBank: M21616 
 
Genomic coordinates: Cytogenetic location: 5q32 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PDGFRB Gene Structure

Chromosome: chr5
Genbank ID: NM_002609 Orientation: -
Length coding sequence : 3318 nucleotides.
Regionstartendregion lengthphase at end
UTR149,534,959149,535,422
UTR
149,516,611149,516,616
Exon149,516,571149,516,610401
Exon149,515,118149,515,4413241
Exon149,514,313149,514,5792671
Exon149,513,444149,513,5711280
Exon149,513,149149,513,3231751
Exon149,512,313149,512,5051932
Exon149,511,542149,511,6571161
Exon149,510,102149,510,2251242
Exon149,509,320149,509,5312121
Exon149,506,083149,506,177950
Exon149,505,008149,505,1401331
Exon149,504,290149,504,3941051
Exon149,503,813149,503,9231111
Exon149,502,605149,502,7641602
Exon149,501,443149,501,6031611
Exon149,500,767149,500,8851190
Exon149,500,451149,500,5731230
Exon149,499,575149,499,6861121
Exon149,499,030149,499,1291002
Exon149,498,310149,498,4151060
Exon149,497,181149,497,4132332
Exon149,495,326149,495,5091840
UTR
149,493,402149,495,325