HNF1B - HNF1 homeobox B

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P35680 HGNC Approved Gene Symbol: HNF1B 
Previous Symbols: TCF2 Ensembl ENSG00000275410 
Synonyms : LFB3, VHNF1, HNF1beta, MODY5 Previous Names: "transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor"
HgncId : HGNC:11630  Omim: 189907 
Refseq: NM_000458  GenBank: BC017714 
 
Genomic coordinates: Cytogenetic location: 17q12 reset view
Fullscreen
Dalliance goes here...

This feature requires an up-to-date web browser.

Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HNF1B Gene Structure

Chromosome: chr17
Genbank ID: NM_000458 Orientation: -
Length coding sequence : 1671 nucleotides.
Regionstartendregion lengthphase at end
UTR
36,104,87636,105,069
Exon36,104,53236,104,8753442
Exon36,099,43136,099,6302001
Exon36,093,55036,093,8142652
Exon36,091,58636,091,8212361
Exon36,070,51136,070,6711610
Exon36,064,92436,065,0561331
Exon36,060,98836,061,1821951
Exon36,059,08236,059,2001190
Exon36,047,37536,047,395210
UTR
36,046,43436,047,374