HDAC9 - histone deacetylase 9

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: no matching PDB entities View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9UKV0 HGNC Approved Gene Symbol: HDAC9 
Ensembl ENSG00000048052 
Synonyms : KIAA0744, HDAC, MITR, HD7, HDAC7B
HgncId : HGNC:14065  Omim: 606543 
GenBank: AF124924 
 
Genomic coordinates: Cytogenetic location: 7p21.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HDAC9 Gene Structure

Chromosome: chr7
Genbank ID: NM_001321898 Orientation: +
Length coding sequence : 1662 nucleotides.
Regionstartendregion lengthphase at end
UTR18,535,88418,535,925
Exon18,535,92618,535,947221
Exon18,624,90418,625,1452420
Exon18,629,95918,630,1241661
Exon18,631,13918,631,2651272
Exon18,633,53118,633,6521221
Exon18,674,25018,674,3651160
Exon18,684,29418,684,4161230
Exon18,687,40818,687,6212141
Exon18,688,08918,688,3062180
Exon18,705,83618,706,1503150
UTR18,706,15118,708,466