HDAC4 - histone deacetylase 4

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 17 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P56524 HGNC Approved Gene Symbol: HDAC4 
Previous Symbols: BDMR Ensembl ENSG00000068024 
Synonyms : KIAA0288, HDAC-A, HDACA, HD4, HA6116, HDAC-4 Previous Names: "brachydactyly-mental retardation syndrome"
HgncId : HGNC:14063  Omim: 605314 
Refseq: NM_006037  GenBank: AB006626 
 
Genomic coordinates: Cytogenetic location: 2q37.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HDAC4 Gene Structure

Chromosome: chr2
Genbank ID: NM_006037 Orientation: -
Length coding sequence : 3252 nucleotides.
Regionstartendregion lengthphase at end
UTR239,400,376239,400,949
UTR
239,352,700239,352,918
Exon239,352,678239,352,699221
Exon239,236,593239,236,664721
Exon239,189,833239,190,0772450
Exon239,176,413239,176,5631511
Exon239,163,803239,163,9231212
Exon239,156,652239,156,7731221
Exon239,144,583239,144,7141321
Exon239,139,684239,139,7961130
Exon239,134,527239,134,6431170
Exon239,134,245239,134,4431991
Exon239,126,456239,126,6792240
Exon239,115,053239,115,3102580
Exon239,111,526239,111,7121871
Exon239,108,050239,108,1831340
Exon239,102,776239,102,8961211
Exon239,095,010239,095,056470
Exon239,090,009239,090,1161080
Exon239,087,559239,087,614562
Exon239,084,155239,084,242880
Exon239,082,102239,082,2211200
Exon239,081,095239,081,192982
Exon239,068,489239,068,6071191
Exon239,066,722239,066,8551340
Exon239,054,749239,054,833851
Exon239,053,460239,053,6011422
Exon239,053,097239,053,136400
UTR
239,048,168239,053,096