HDAC4 - histone deacetylase 4

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 14 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P56524 HGNC Approved Gene Symbol: HDAC4 
Previous Symbols: BDMR Ensembl ENSG00000068024 
Synonyms : KIAA0288, HDAC-A, HDACA, HD4, HA6116, HDAC-4 Previous Names: "brachydactyly-mental retardation syndrome"
HgncId : HGNC:14063  Omim: 605314 
Refseq: NM_006037  GenBank: AB006626 
 
Genomic coordinates: Cytogenetic location: 2q37.3 reset view
Currently highlighted: Genomic position: chr2:240,005,938 View in genomic position mapping tool
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HDAC4 Gene Structure

Chromosome: chr2
Genbank ID: NM_006037 Orientation: -
Length coding sequence : 3252 nucleotides.
Regionstartendregion lengthphase at end
UTR240,322,070240,322,643
UTR
240,274,395240,274,613
Exon240,274,373240,274,394221
Exon240,158,289240,158,360721
Exon240,111,529240,111,7732450
Exon240,098,109240,098,2591511
Exon240,085,499240,085,6191212
Exon240,078,348240,078,4691221
Exon240,066,279240,066,4101321
Exon240,061,380240,061,4921130
Exon240,056,223240,056,3391170
Exon240,055,941240,056,1391991
Exon240,048,152240,048,3752240
Exon240,036,749240,037,0062580
Exon240,033,222240,033,4081871
Exon240,029,746240,029,8791340
Exon240,024,472240,024,5921211
Exon240,016,706240,016,752470
Exon240,011,705240,011,8121080
Exon240,009,255240,009,310562
Exon240,005,851240,005,938880
Exon240,003,798240,003,9171200
Exon240,002,791240,002,888982
Exon239,990,185239,990,3031191
Exon239,988,418239,988,5511340
Exon239,976,445239,976,529851
Exon239,975,156239,975,2971422
Exon239,974,793239,974,832400
UTR
239,969,864239,974,792