HDAC3 - histone deacetylase 3

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: O15379 HGNC Approved Gene Symbol: HDAC3 
Ensembl ENSG00000171720 
Synonyms : RPD3, HD3, RPD3-2
HgncId : HGNC:4854  Omim: 605166 
Refseq: NM_003883  GenBank: AF059650 
 
Genomic coordinates: Cytogenetic location: 5q31.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

HDAC3 Gene Structure

Chromosome: chr5〉e=141005761
Genbank ID: NM_003883 Orientation: -
Length coding sequence : 1284 nucleotides.
Regionstartendregion lengthphase at end
UTR
141,016,358141,016,423
Exon141,016,303141,016,357551
Exon141,016,115141,016,197830
Exon141,014,378141,014,5201432
Exon141,009,611141,009,692820
Exon141,009,427141,009,483570
Exon141,009,251141,009,306562
Exon141,008,740141,008,8731341
Exon141,008,126141,008,206811
Exon141,007,681141,007,754740
Exon141,007,460141,007,524652
Exon141,005,761141,005,850902
Exon141,005,580141,005,638591
Exon141,005,252141,005,331800
Exon141,004,775141,004,9321582
Exon141,001,035141,001,104700
UTR
141,000,443141,001,034