HBA1 - hemoglobin subunit alpha 1
Gene View
The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.
Genomic coordinates: |
Cytogenetic location:
16p13.3
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Legend
The genome browser is based on Biodalliance browser
The tracks display the following information:
Track
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Info
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Data Source
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Genome |
A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location,
or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue).
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GRCh37 assembly
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PDB |
The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows
additional information and links for more information.
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RCSB PDB
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Gene |
This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions.
The black lines connecting boxes represent introns.
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Gencode
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Repeats |
This track shows various repeat regions that have been annotated along the genome.
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UCSC genome browser
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Conservation |
PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome.
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UCSC genome browser
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HBA1 Gene Structure
Chromosome: chr16
Genbank ID: NM_000558
Orientation: +
Length coding sequence : 426 nucleotides.
Region | start | end | region length | phase at end |
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UTR | 226,649 | 226,715 | | |
Exon | 226,716 | 226,810 | 95 | 2 |
Exon | 226,928 | 227,132 | 205 | 0 |
Exon | 227,282 | 227,410 | 129 | 0 |
UTR | 227,411 | 227,521 | | |