DSC1 - desmocollin 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 1 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q08554  HGNC Approved Gene Symbol: DSC1 
Ensembl ENSG00000134765 
Synonyms : CDHF1
HgncId : HGNC:3035  Omim: 125643 
Refseq: NM_004948, NM_024421  GenBank: AF293358 
 
Genomic coordinates: Cytogenetic location: 18q12.1 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DSC1 Gene Structure

Chromosome: chr18
Genbank ID: NM_004948 Orientation: -
Length coding sequence : 2520 nucleotides.
Regionstartendregion lengthphase at end
UTR
28,742,55828,742,819
Exon28,742,49528,742,557630
Exon28,739,40828,739,492851
Exon28,737,33428,737,5362030
Exon28,736,00628,736,1251200
Exon28,734,73728,734,8921560
Exon28,728,46128,728,6051451
Exon28,725,57428,725,7401670
Exon28,723,62028,723,7541350
Exon28,721,96228,722,1471860
Exon28,720,00528,720,2642602
Exon28,719,71128,719,8531431
Exon28,714,53528,714,7472131
Exon28,713,85428,714,0932401
Exon28,712,53128,712,6521220
Exon28,711,55728,711,8052490
Exon28,710,76628,710,801360
UTR
28,710,75628,710,765
UTR28,709,21328,710,674