CDK9 - cyclin dependent kinase 9

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 23 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P50750 HGNC Approved Gene Symbol: CDK9 
Previous Symbols: CDC2L4 Ensembl ENSG00000136807 
Synonyms : PITALRE, C-2k, TAK Previous Names: "cyclin-dependent kinase 9 (CDC2-related kinase)"
HgncId : HGNC:1780  Omim: 603251 
GenBank: L25676 
 
Genomic coordinates: Cytogenetic location: 9q34.11 reset view
Currently highlighted: Genomic position: chr9:130,549,061 View in genomic position mapping tool
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

CDK9 Gene Structure

Chromosome: chr9
Genbank ID: NM_001261 Orientation: +
Length coding sequence : 1116 nucleotides.
Regionstartendregion lengthphase at end
UTR130,548,304130,548,427
Exon130,548,428130,548,519922
Exon130,548,980130,549,061820
Exon130,549,797130,549,887911
Exon130,550,226130,550,3921670
Exon130,550,493130,550,6641721
Exon130,550,823130,550,9711490
Exon130,551,457130,551,8223660
UTR130,551,823130,553,052