ATAT1 - alpha tubulin acetyltransferase 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 11 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q5SQI0 HGNC Approved Gene Symbol: ATAT1 
Previous Symbols: C6orf134 Ensembl ENSG00000137343 
Synonyms : FLJ13158, Em:AB023049.7, MEC17 Previous Names: "chromosome 6 open reading frame 134"
HgncId : HGNC:21186  Omim: 615556 
Refseq: NM_024909  GenBank: AK023220 
 
Genomic coordinates: Cytogenetic location: 6p21.33 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

ATAT1 Gene Structure

Chromosome: chr6_ssto_hap7
Genbank ID: NM_024909 Orientation: +
Length coding sequence : 999 nucleotides.
Regionstartendregion lengthphase at end
UTR1,926,8971,926,941
Exon1,926,9421,927,0481072
Exon1,927,5161,927,576610
Exon1,927,6921,927,783922
Exon1,927,9071,927,967610
Exon1,928,0881,928,2011140
Exon1,928,3851,928,4861020
Exon1,940,4341,940,479461
Exon1,940,5921,940,660691
Exon1,942,2331,942,304721
Exon1,942,8251,943,0682442
Exon1,943,5861,943,619340
UTR1,943,6201,944,728