ARNT - aryl hydrocarbon receptor nuclear translocator

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 21 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P27540  HGNC Approved Gene Symbol: ARNT 
Ensembl ENSG00000143437 
Synonyms : HIF-1beta, bHLHe2
HgncId : HGNC:700  Omim: 126110 
GenBank: AF001307 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

ARNT Gene Structure

Chromosome: chr1
Genbank ID: NM_001197325 Orientation: -
Length coding sequence : 2319 nucleotides.
Regionstartendregion lengthphase at end
UTR
150,849,044150,849,244
Exon150,849,019150,849,043251
Exon150,830,825150,830,9361122
Exon150,825,238150,825,282452
Exon150,818,739150,818,783452
Exon150,811,917150,812,1302140
Exon150,808,756150,808,9692141
Exon150,807,014150,807,1161032
Exon150,804,810150,804,875662
Exon150,804,294150,804,379861
Exon150,802,380150,802,456770
Exon150,801,569150,801,7031350
Exon150,799,019150,799,093750
Exon150,795,670150,795,8211522
Exon150,790,396150,790,5061112
Exon150,789,837150,789,909730
Exon150,789,558150,789,6781211
Exon150,789,264150,789,3661032
Exon150,788,735150,788,8821480
Exon150,786,553150,786,7121601
Exon150,785,648150,785,8141670
Exon150,784,497150,784,586900
UTR
150,782,181150,784,496