0.015279
0.008821
0.000000
-0.000000
0.017643
0.000000
0.000000
-0.000000
0.013833
0.000000
0.000000
0.000000
Martin, R.N.A.
McGeehan, J.E.
Kneale, G.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.000
90.000
120.000
65.449
65.449
72.290
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C3 H2 O4 -2
102.046
MALONATE ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
O
N
241
N
O
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
N
N
246
S
C
N
247
N
C
N
248
N
O
N
249
N
C
Y
250
N
C
Y
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
N
N
269
S
C
N
270
N
C
N
271
N
O
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
N
N
283
S
C
N
284
N
C
N
285
N
O
N
286
R
C
N
287
N
O
N
288
N
C
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
N
N
300
S
C
N
301
N
C
N
302
N
O
N
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
N
310
N
O
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
N
N
324
S
C
N
325
N
C
N
326
N
O
N
327
N
C
N
328
N
C
N
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
Y
243
N
doub
Y
244
N
sing
Y
245
N
sing
N
246
N
sing
Y
247
N
doub
N
248
N
sing
Y
249
N
doub
N
250
N
sing
Y
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
Y
295
N
doub
Y
296
N
sing
Y
297
N
sing
N
298
N
sing
Y
299
N
doub
N
300
N
sing
Y
301
N
doub
N
302
N
sing
Y
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
US
Plos One
1932-6203
9
e98365
e98365
10.1371/journal.pone.0098365
24887147
Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I.
2014
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
65
900
905
10.1107/S0907444909020514
19690367
Structure of the restriction-modification controller protein C.Esp1396I.
2009
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
40
4158
4167
10.1093/nar/gkr1250
22210861
Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex.
2012
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
40
10532
10542
10.1093/nar/gks718
22941636
The structural basis of differential DNA sequence recognition by restriction-modification controller proteins.
2012
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
65
900
905
10.1107/S0907444909020514
19690367
Structure of the restriction-modification controller protein C.Esp1396I.
2009
10.2210/pdb4i6t/pdb
pdb_00004i6t
100
1
PIXEL
2012-09-15
DECTRIS PILATUS 2M
Si(111) double crystal monochromator
SINGLE WAVELENGTH
M
x-ray
1
0.92
1.0
I04-1
Diamond
0.92
SYNCHROTRON
DIAMOND BEAMLINE I04-1
9491.148
Regulatory protein
T36A
2
man
polymer
102.046
MALONATE ION
1
syn
non-polymer
18.015
water
87
nat
water
no
no
GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRAYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK
HD
GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRAYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK
HD
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
RFL1396
sample
esp1396IC
211595
Enterobacter sp.
469008
Escherichia coli
BL21(DE3)pLysS
Plasmid
pET28
1
2.35
47.76
VAPOR DIFFUSION, SITTING DROP
7
100 mM Sodium Sulphate, 2.4 M Sodium Malonate, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
struct_ncs_dom_lim
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-11-13
1
1
2014-06-18
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ncs_dom_lim.beg_auth_comp_id
_struct_ncs_dom_lim.beg_label_asym_id
_struct_ncs_dom_lim.beg_label_comp_id
_struct_ncs_dom_lim.beg_label_seq_id
_struct_ncs_dom_lim.end_auth_comp_id
_struct_ncs_dom_lim.end_label_asym_id
_struct_ncs_dom_lim.end_label_comp_id
_struct_ncs_dom_lim.end_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
S52A Mutant Free Protein
R46A Mutant Free Protein
R46A Mutant Free Protein
Native Free Protein
R35A Mutant Free Protein
DNA Bound Tetramer
DNA Bound Dimer (OL)
DNA Bound Dimer (OM)
Native Free Protein (Triclinic)
RCSB
Y
RCSB
2012-11-30
REL
REL
MLI
MALONATE ION
HOH
water
MLI
1
2
MLI
MLI
101
A
HOH
1
3
HOH
HOH
201
A
HOH
2
3
HOH
HOH
202
A
HOH
3
3
HOH
HOH
203
A
HOH
4
3
HOH
HOH
204
A
HOH
5
3
HOH
HOH
205
A
HOH
6
3
HOH
HOH
206
A
HOH
7
3
HOH
HOH
207
A
HOH
9
3
HOH
HOH
208
A
HOH
11
3
HOH
HOH
209
A
HOH
12
3
HOH
HOH
210
A
HOH
13
3
HOH
HOH
211
A
HOH
14
3
HOH
HOH
212
A
HOH
15
3
HOH
HOH
213
A
HOH
16
3
HOH
HOH
214
A
HOH
17
3
HOH
HOH
215
A
HOH
20
3
HOH
HOH
216
A
HOH
21
3
HOH
HOH
217
A
HOH
23
3
HOH
HOH
218
A
HOH
27
3
HOH
HOH
219
A
HOH
28
3
HOH
HOH
220
A
HOH
30
3
HOH
HOH
221
A
HOH
31
3
HOH
HOH
222
A
HOH
32
3
HOH
HOH
223
A
HOH
35
3
HOH
HOH
224
A
HOH
41
3
HOH
HOH
225
A
HOH
42
3
HOH
HOH
226
A
HOH
45
3
HOH
HOH
227
A
HOH
48
3
HOH
HOH
228
A
HOH
49
3
HOH
HOH
229
A
HOH
52
3
HOH
HOH
230
A
HOH
53
3
HOH
HOH
231
A
HOH
56
3
HOH
HOH
232
A
HOH
58
3
HOH
HOH
233
A
HOH
59
3
HOH
HOH
234
A
HOH
60
3
HOH
HOH
235
A
HOH
61
3
HOH
HOH
236
A
HOH
62
3
HOH
HOH
237
A
HOH
67
3
HOH
HOH
238
A
HOH
74
3
HOH
HOH
239
A
HOH
78
3
HOH
HOH
240
A
HOH
81
3
HOH
HOH
241
A
HOH
82
3
HOH
HOH
242
A
HOH
83
3
HOH
HOH
243
A
HOH
85
3
HOH
HOH
244
A
HOH
86
3
HOH
HOH
245
A
HOH
87
3
HOH
HOH
246
A
HOH
84
3
HOH
HOH
101
B
HOH
8
3
HOH
HOH
102
B
HOH
10
3
HOH
HOH
103
B
HOH
18
3
HOH
HOH
104
B
HOH
19
3
HOH
HOH
105
B
HOH
22
3
HOH
HOH
106
B
HOH
24
3
HOH
HOH
107
B
HOH
25
3
HOH
HOH
108
B
HOH
26
3
HOH
HOH
109
B
HOH
29
3
HOH
HOH
110
B
HOH
33
3
HOH
HOH
111
B
HOH
34
3
HOH
HOH
112
B
HOH
36
3
HOH
HOH
113
B
HOH
37
3
HOH
HOH
114
B
HOH
38
3
HOH
HOH
115
B
HOH
39
3
HOH
HOH
116
B
HOH
40
3
HOH
HOH
117
B
HOH
43
3
HOH
HOH
118
B
HOH
44
3
HOH
HOH
119
B
HOH
46
3
HOH
HOH
120
B
HOH
47
3
HOH
HOH
121
B
HOH
50
3
HOH
HOH
122
B
HOH
51
3
HOH
HOH
123
B
HOH
54
3
HOH
HOH
124
B
HOH
55
3
HOH
HOH
125
B
HOH
57
3
HOH
HOH
126
B
HOH
63
3
HOH
HOH
127
B
HOH
64
3
HOH
HOH
128
B
HOH
65
3
HOH
HOH
129
B
HOH
66
3
HOH
HOH
130
B
HOH
68
3
HOH
HOH
131
B
HOH
69
3
HOH
HOH
132
B
HOH
70
3
HOH
HOH
133
B
HOH
72
3
HOH
HOH
134
B
HOH
73
3
HOH
HOH
135
B
HOH
75
3
HOH
HOH
136
B
HOH
76
3
HOH
HOH
137
B
HOH
77
3
HOH
HOH
138
B
HOH
79
3
HOH
HOH
139
B
HOH
80
3
HOH
HOH
140
B
HOH
88
3
HOH
HOH
141
B
2.210
2.210
44.600
44.600
Phaser MODE: MR_AUTO
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
n
5
2
A
SER
3
n
6
SER
3
A
PHE
4
n
7
PHE
4
A
LEU
5
n
8
LEU
5
A
LEU
6
n
9
LEU
6
A
SER
7
n
10
SER
7
A
LYS
8
n
11
LYS
8
A
VAL
9
n
12
VAL
9
A
SER
10
n
13
SER
10
A
PHE
11
n
14
PHE
11
A
VAL
12
n
15
VAL
12
A
ILE
13
n
16
ILE
13
A
LYS
14
n
17
LYS
14
A
LYS
15
n
18
LYS
15
A
ILE
16
n
19
ILE
16
A
ARG
17
n
20
ARG
17
A
LEU
18
n
21
LEU
18
A
GLU
19
n
22
GLU
19
A
LYS
20
n
23
LYS
20
A
GLY
21
n
24
GLY
21
A
MET
22
n
25
MET
22
A
THR
23
n
26
THR
23
A
GLN
24
n
27
GLN
24
A
GLU
25
n
28
GLU
25
A
ASP
26
n
29
ASP
26
A
LEU
27
n
30
LEU
27
A
ALA
28
n
31
ALA
28
A
TYR
29
n
32
TYR
29
A
LYS
30
n
33
LYS
30
A
SER
31
n
34
SER
31
A
ASN
32
n
35
ASN
32
A
LEU
33
n
36
LEU
33
A
ASP
34
n
37
ASP
34
A
ARG
35
n
38
ARG
35
A
ALA
36
n
39
ALA
36
A
TYR
37
n
40
TYR
37
A
ILE
38
n
41
ILE
38
A
SER
39
n
42
SER
39
A
GLY
40
n
43
GLY
40
A
ILE
41
n
44
ILE
41
A
GLU
42
n
45
GLU
42
A
ARG
43
n
46
ARG
43
A
ASN
44
n
47
ASN
44
A
SER
45
n
48
SER
45
A
ARG
46
n
49
ARG
46
A
ASN
47
n
50
ASN
47
A
LEU
48
n
51
LEU
48
A
THR
49
n
52
THR
49
A
ILE
50
n
53
ILE
50
A
LYS
51
n
54
LYS
51
A
SER
52
n
55
SER
52
A
LEU
53
n
56
LEU
53
A
GLU
54
n
57
GLU
54
A
LEU
55
n
58
LEU
55
A
ILE
56
n
59
ILE
56
A
MET
57
n
60
MET
57
A
LYS
58
n
61
LYS
58
A
GLY
59
n
62
GLY
59
A
LEU
60
n
63
LEU
60
A
GLU
61
n
64
GLU
61
A
VAL
62
n
65
VAL
62
A
SER
63
n
66
SER
63
A
ASP
64
n
67
ASP
64
A
VAL
65
n
68
VAL
65
A
VAL
66
n
69
VAL
66
A
PHE
67
n
70
PHE
67
A
PHE
68
n
71
PHE
68
A
GLU
69
n
72
GLU
69
A
MET
70
n
73
MET
70
A
LEU
71
n
74
LEU
71
A
ILE
72
n
75
ILE
72
A
LYS
73
n
76
LYS
73
A
GLU
74
n
77
GLU
74
A
ILE
75
n
78
ILE
75
A
LEU
76
n
79
LEU
76
A
LYS
77
n
80
LYS
77
A
n
81
78
A
n
82
79
A
n
1
-2
B
n
2
-1
B
n
3
0
B
n
4
1
B
n
5
2
B
SER
3
n
6
SER
3
B
PHE
4
n
7
PHE
4
B
LEU
5
n
8
LEU
5
B
LEU
6
n
9
LEU
6
B
SER
7
n
10
SER
7
B
LYS
8
n
11
LYS
8
B
VAL
9
n
12
VAL
9
B
SER
10
n
13
SER
10
B
PHE
11
n
14
PHE
11
B
VAL
12
n
15
VAL
12
B
ILE
13
n
16
ILE
13
B
LYS
14
n
17
LYS
14
B
LYS
15
n
18
LYS
15
B
ILE
16
n
19
ILE
16
B
ARG
17
n
20
ARG
17
B
LEU
18
n
21
LEU
18
B
GLU
19
n
22
GLU
19
B
LYS
20
n
23
LYS
20
B
GLY
21
n
24
GLY
21
B
MET
22
n
25
MET
22
B
THR
23
n
26
THR
23
B
GLN
24
n
27
GLN
24
B
GLU
25
n
28
GLU
25
B
ASP
26
n
29
ASP
26
B
LEU
27
n
30
LEU
27
B
ALA
28
n
31
ALA
28
B
TYR
29
n
32
TYR
29
B
LYS
30
n
33
LYS
30
B
SER
31
n
34
SER
31
B
ASN
32
n
35
ASN
32
B
LEU
33
n
36
LEU
33
B
ASP
34
n
37
ASP
34
B
ARG
35
n
38
ARG
35
B
ALA
36
n
39
ALA
36
B
TYR
37
n
40
TYR
37
B
ILE
38
n
41
ILE
38
B
SER
39
n
42
SER
39
B
GLY
40
n
43
GLY
40
B
ILE
41
n
44
ILE
41
B
GLU
42
n
45
GLU
42
B
ARG
43
n
46
ARG
43
B
ASN
44
n
47
ASN
44
B
SER
45
n
48
SER
45
B
ARG
46
n
49
ARG
46
B
ASN
47
n
50
ASN
47
B
LEU
48
n
51
LEU
48
B
THR
49
n
52
THR
49
B
ILE
50
n
53
ILE
50
B
LYS
51
n
54
LYS
51
B
SER
52
n
55
SER
52
B
LEU
53
n
56
LEU
53
B
GLU
54
n
57
GLU
54
B
LEU
55
n
58
LEU
55
B
ILE
56
n
59
ILE
56
B
MET
57
n
60
MET
57
B
LYS
58
n
61
LYS
58
B
GLY
59
n
62
GLY
59
B
LEU
60
n
63
LEU
60
B
GLU
61
n
64
GLU
61
B
VAL
62
n
65
VAL
62
B
SER
63
n
66
SER
63
B
ASP
64
n
67
ASP
64
B
VAL
65
n
68
VAL
65
B
VAL
66
n
69
VAL
66
B
PHE
67
n
70
PHE
67
B
PHE
68
n
71
PHE
68
B
GLU
69
n
72
GLU
69
B
MET
70
n
73
MET
70
B
LEU
71
n
74
LEU
71
B
ILE
72
n
75
ILE
72
B
LYS
73
n
76
LYS
73
B
GLU
74
n
77
GLU
74
B
ILE
75
n
78
ILE
75
B
LEU
76
n
79
LEU
76
B
LYS
77
n
80
LYS
77
B
n
81
78
B
n
82
79
B
author_and_software_defined_assembly
PISA
2
dimeric
2120
-17
7760
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
CG
LYS
77
B
CG
LYS
80
1
Y
1
B
CD
LYS
77
B
CD
LYS
80
1
Y
1
B
CE
LYS
77
B
CE
LYS
80
1
Y
1
B
NZ
LYS
77
B
NZ
LYS
80
1
Y
1
A
GLY
-2
A
GLY
1
1
Y
1
A
SER
-1
A
SER
2
1
Y
1
A
HIS
0
A
HIS
3
1
Y
1
A
MET
1
A
MET
4
1
Y
1
A
GLU
2
A
GLU
5
1
Y
1
A
HIS
78
A
HIS
81
1
Y
1
A
ASP
79
A
ASP
82
1
Y
1
B
GLY
-2
B
GLY
1
1
Y
1
B
SER
-1
B
SER
2
1
Y
1
B
HIS
0
B
HIS
3
1
Y
1
B
MET
1
B
MET
4
1
Y
1
B
GLU
2
B
GLU
5
1
Y
1
B
HIS
78
B
HIS
81
1
Y
1
B
ASP
79
B
ASP
82
1
Y
1
B
B
NE
O
ARG
HOH
43
132
2.11
1
A
ASN
44
73.55
33.11
80.320
28.8705
9.080
0.0100
0.0100
-0.0000
0.0100
-0.0000
-0.0400
0.9530
0.9110
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
0.2452
0.1844
0.1874
2.0000
29.8100
569
11894
4.8000
99.4800
0.2521
0.1920
1.000
0.290
0.8349
5.0370
0.1340
0.1753
0.1704
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.1750
0.1700
0.8000
0.8000
1.2000
MAXIMUM LIKELIHOOD
MASK
2.0000
29.8100
87
1306
7
0
1212
0.019
0.019
1244
0.006
0.020
1297
1.875
2.010
1662
1.321
3.000
2994
5.845
5.000
154
36.367
24.400
50
18.018
15.000
275
15.756
15.000
8
0.101
0.200
199
0.009
0.020
1331
0.005
0.020
257
1
A
1
4415
X-RAY DIFFRACTION
interatomic distance
0.200
0.050
2
B
1
4415
X-RAY DIFFRACTION
interatomic distance
0.200
0.050
0.4750
0.3240
2.0520
37
841
878
20
100.0000
1.970
56.681
4I6T
130244
12508
0.437
1
4.200
10.400
99.600
0.026
1.970
2.020
1.100
9506
886
1
10.700
100.000
0.026
9.030
44.600
9.000
1611
142
1
11.300
99.500
data reduction
Andrew G.W. Leslie
andrew@mrc-lmb.cam.ac.uk
http://www.mrc-lmb.cam.ac.uk/harry/mosflm/
MOSFLM
package
data scaling
Phil Evans
03/07/12
http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html
Aimless
program
0.1.26
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Tue Jul 10 12:42:19 2012 (svn )
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.5.1
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
GDA
Crystal Structure of a T36A mutant of the Restriction-Modification Controller Protein C.Esp1396I
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
biological unit is the same as asym.
A
SER
3
A
SER
6
HELX_P
A
LYS
20
A
LYS
23
1
1
18
A
THR
23
A
THR
26
HELX_P
A
ASN
32
A
ASN
35
1
2
10
A
ASP
34
A
ASP
37
HELX_P
A
ARG
43
A
ARG
46
1
3
10
A
THR
49
A
THR
52
HELX_P
A
LEU
60
A
LEU
63
1
4
12
A
SER
63
A
SER
66
HELX_P
A
LEU
76
A
LEU
79
1
5
14
B
PHE
4
B
PHE
7
HELX_P
B
LYS
20
B
LYS
23
1
6
17
B
THR
23
B
THR
26
HELX_P
B
ASN
32
B
ASN
35
1
7
10
B
ASP
34
B
ASP
37
HELX_P
B
ASN
44
B
ASN
47
1
8
11
B
SER
45
B
SER
48
HELX_P
B
LEU
48
B
LEU
51
5
9
4
B
THR
49
B
THR
52
HELX_P
B
LEU
60
B
LEU
63
1
10
12
B
SER
63
B
SER
66
HELX_P
B
LYS
77
B
LYS
80
1
11
15
TRANSCRIPTION
Restriction-modification, helix-turn-helix, transcriptional regulator, DNA, TRANSCRIPTION
A
B
A
SER
3
A
SER
6
A
LYS
77
A
LYS
80
0
B
SER
3
B
SER
6
B
LYS
77
B
LYS
80
0
Q8GGH0_9ENTR
UNP
1
1
Q8GGH0
MESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD
1
79
4I6T
1
79
Q8GGH0
A
1
4
82
1
79
4I6T
1
79
Q8GGH0
B
1
4
82
1
expression tag
GLY
-2
4I6T
A
Q8GGH0
UNP
1
1
expression tag
SER
-1
4I6T
A
Q8GGH0
UNP
2
1
expression tag
HIS
0
4I6T
A
Q8GGH0
UNP
3
1
THR
engineered mutation
ALA
36
4I6T
A
Q8GGH0
UNP
36
39
2
expression tag
GLY
-2
4I6T
B
Q8GGH0
UNP
1
2
expression tag
SER
-1
4I6T
B
Q8GGH0
UNP
2
2
expression tag
HIS
0
4I6T
B
Q8GGH0
UNP
3
2
THR
engineered mutation
ALA
36
4I6T
B
Q8GGH0
UNP
36
39
BINDING SITE FOR RESIDUE MLI A 101
A
MLI
101
Software
4
A
SER
3
A
SER
6
4
1_555
A
TYR
29
A
TYR
32
4
2_564
A
ASN
44
A
ASN
47
4
1_555
A
SER
45
A
SER
48
4
1_555
170
P 65