0.019972
0.000000
0.001335
0.000000
0.020681
0.000000
0.000000
0.000000
0.014699
0.00000
0.00000
0.00000
Friberg, A.
Zhao, B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
93.83
90.00
50.070
48.353
68.183
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Med.Chem.
JMCMAR
0151
0022-2623
56
15
30
10.1021/jm301448p
23244564
Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design.
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
2012-06-19
MAR scanner 300 mm plate
SAGITALLY FOCUSED Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.97856
1.0
21-ID-G
APS
0.97856
SYNCHROTRON
APS BEAMLINE 21-ID-G
17850.281
Induced myeloid leukemia cell differentiation protein Mcl-1
2
man
polymer
1849.085
Mcl-1 BH3 peptide
2
syn
polymer
18.015
water
387
nat
water
Bcl-2-like protein 3, Bcl2-L-3, Bcl-2-related protein EAT/mcl1, mcl1/EAT
no
no
GDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVM
IHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG
GDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVM
IHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG
A,B
polypeptide(L)
no
yes
(ACE)ALETLRRVGDGVQRNH(NH2)
XALETLRRVGDGVQRNHX
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
MCL1, BCL2L3
9606
Homo sapiens
562
Escherichia coli
1
2.09
41.15
VAPOR DIFFUSION, HANGING DROP
5.5
25% PEG3350, 0.2M NaCl, 0.1M Bis-Tris, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
repository
Initial release
Database references
1
0
2013-01-09
1
1
2013-03-06
RCSB
Y
RCSB
2012-11-07
REL
REL
HOH
water
Synthetic peptide
sample
HOH
1
3
HOH
HOH
401
A
HOH
2
3
HOH
HOH
402
A
HOH
3
3
HOH
HOH
403
A
HOH
4
3
HOH
HOH
404
A
HOH
5
3
HOH
HOH
405
A
HOH
6
3
HOH
HOH
406
A
HOH
7
3
HOH
HOH
407
A
HOH
8
3
HOH
HOH
408
A
HOH
9
3
HOH
HOH
409
A
HOH
10
3
HOH
HOH
410
A
HOH
11
3
HOH
HOH
411
A
HOH
12
3
HOH
HOH
412
A
HOH
13
3
HOH
HOH
413
A
HOH
14
3
HOH
HOH
414
A
HOH
15
3
HOH
HOH
415
A
HOH
16
3
HOH
HOH
416
A
HOH
18
3
HOH
HOH
417
A
HOH
19
3
HOH
HOH
418
A
HOH
21
3
HOH
HOH
419
A
HOH
23
3
HOH
HOH
420
A
HOH
24
3
HOH
HOH
421
A
HOH
25
3
HOH
HOH
422
A
HOH
26
3
HOH
HOH
423
A
HOH
27
3
HOH
HOH
424
A
HOH
28
3
HOH
HOH
425
A
HOH
29
3
HOH
HOH
426
A
HOH
31
3
HOH
HOH
427
A
HOH
33
3
HOH
HOH
428
A
HOH
34
3
HOH
HOH
429
A
HOH
35
3
HOH
HOH
430
A
HOH
37
3
HOH
HOH
431
A
HOH
38
3
HOH
HOH
432
A
HOH
39
3
HOH
HOH
433
A
HOH
41
3
HOH
HOH
434
A
HOH
43
3
HOH
HOH
435
A
HOH
45
3
HOH
HOH
436
A
HOH
46
3
HOH
HOH
437
A
HOH
50
3
HOH
HOH
438
A
HOH
52
3
HOH
HOH
439
A
HOH
53
3
HOH
HOH
440
A
HOH
54
3
HOH
HOH
441
A
HOH
55
3
HOH
HOH
442
A
HOH
56
3
HOH
HOH
443
A
HOH
57
3
HOH
HOH
444
A
HOH
63
3
HOH
HOH
445
A
HOH
64
3
HOH
HOH
446
A
HOH
65
3
HOH
HOH
447
A
HOH
66
3
HOH
HOH
448
A
HOH
67
3
HOH
HOH
449
A
HOH
68
3
HOH
HOH
450
A
HOH
69
3
HOH
HOH
451
A
HOH
70
3
HOH
HOH
452
A
HOH
72
3
HOH
HOH
453
A
HOH
76
3
HOH
HOH
454
A
HOH
77
3
HOH
HOH
455
A
HOH
78
3
HOH
HOH
456
A
HOH
79
3
HOH
HOH
457
A
HOH
80
3
HOH
HOH
458
A
HOH
82
3
HOH
HOH
459
A
HOH
83
3
HOH
HOH
460
A
HOH
85
3
HOH
HOH
461
A
HOH
86
3
HOH
HOH
462
A
HOH
89
3
HOH
HOH
463
A
HOH
90
3
HOH
HOH
464
A
HOH
91
3
HOH
HOH
465
A
HOH
92
3
HOH
HOH
466
A
HOH
93
3
HOH
HOH
467
A
HOH
95
3
HOH
HOH
468
A
HOH
100
3
HOH
HOH
469
A
HOH
101
3
HOH
HOH
470
A
HOH
102
3
HOH
HOH
471
A
HOH
104
3
HOH
HOH
472
A
HOH
105
3
HOH
HOH
473
A
HOH
108
3
HOH
HOH
474
A
HOH
110
3
HOH
HOH
475
A
HOH
111
3
HOH
HOH
476
A
HOH
112
3
HOH
HOH
477
A
HOH
113
3
HOH
HOH
478
A
HOH
114
3
HOH
HOH
479
A
HOH
115
3
HOH
HOH
480
A
HOH
117
3
HOH
HOH
481
A
HOH
119
3
HOH
HOH
482
A
HOH
120
3
HOH
HOH
483
A
HOH
121
3
HOH
HOH
484
A
HOH
122
3
HOH
HOH
485
A
HOH
123
3
HOH
HOH
486
A
HOH
124
3
HOH
HOH
487
A
HOH
126
3
HOH
HOH
488
A
HOH
130
3
HOH
HOH
489
A
HOH
135
3
HOH
HOH
490
A
HOH
136
3
HOH
HOH
491
A
HOH
137
3
HOH
HOH
492
A
HOH
139
3
HOH
HOH
493
A
HOH
140
3
HOH
HOH
494
A
HOH
141
3
HOH
HOH
495
A
HOH
142
3
HOH
HOH
496
A
HOH
143
3
HOH
HOH
497
A
HOH
144
3
HOH
HOH
498
A
HOH
145
3
HOH
HOH
499
A
HOH
149
3
HOH
HOH
500
A
HOH
150
3
HOH
HOH
501
A
HOH
154
3
HOH
HOH
502
A
HOH
155
3
HOH
HOH
503
A
HOH
158
3
HOH
HOH
504
A
HOH
159
3
HOH
HOH
505
A
HOH
161
3
HOH
HOH
506
A
HOH
164
3
HOH
HOH
507
A
HOH
165
3
HOH
HOH
508
A
HOH
166
3
HOH
HOH
509
A
HOH
168
3
HOH
HOH
510
A
HOH
169
3
HOH
HOH
511
A
HOH
170
3
HOH
HOH
512
A
HOH
175
3
HOH
HOH
513
A
HOH
178
3
HOH
HOH
514
A
HOH
179
3
HOH
HOH
515
A
HOH
180
3
HOH
HOH
516
A
HOH
181
3
HOH
HOH
517
A
HOH
182
3
HOH
HOH
518
A
HOH
185
3
HOH
HOH
519
A
HOH
188
3
HOH
HOH
520
A
HOH
189
3
HOH
HOH
521
A
HOH
195
3
HOH
HOH
522
A
HOH
196
3
HOH
HOH
523
A
HOH
197
3
HOH
HOH
524
A
HOH
201
3
HOH
HOH
525
A
HOH
202
3
HOH
HOH
526
A
HOH
204
3
HOH
HOH
527
A
HOH
205
3
HOH
HOH
528
A
HOH
206
3
HOH
HOH
529
A
HOH
208
3
HOH
HOH
530
A
HOH
209
3
HOH
HOH
531
A
HOH
211
3
HOH
HOH
532
A
HOH
216
3
HOH
HOH
533
A
HOH
217
3
HOH
HOH
534
A
HOH
218
3
HOH
HOH
535
A
HOH
220
3
HOH
HOH
536
A
HOH
222
3
HOH
HOH
537
A
HOH
224
3
HOH
HOH
538
A
HOH
226
3
HOH
HOH
539
A
HOH
229
3
HOH
HOH
540
A
HOH
231
3
HOH
HOH
541
A
HOH
232
3
HOH
HOH
542
A
HOH
233
3
HOH
HOH
543
A
HOH
234
3
HOH
HOH
544
A
HOH
236
3
HOH
HOH
545
A
HOH
237
3
HOH
HOH
546
A
HOH
238
3
HOH
HOH
547
A
HOH
239
3
HOH
HOH
548
A
HOH
240
3
HOH
HOH
549
A
HOH
241
3
HOH
HOH
550
A
HOH
242
3
HOH
HOH
551
A
HOH
244
3
HOH
HOH
552
A
HOH
245
3
HOH
HOH
553
A
HOH
246
3
HOH
HOH
554
A
HOH
247
3
HOH
HOH
555
A
HOH
248
3
HOH
HOH
556
A
HOH
252
3
HOH
HOH
557
A
HOH
253
3
HOH
HOH
558
A
HOH
256
3
HOH
HOH
559
A
HOH
258
3
HOH
HOH
560
A
HOH
259
3
HOH
HOH
561
A
HOH
260
3
HOH
HOH
562
A
HOH
261
3
HOH
HOH
563
A
HOH
263
3
HOH
HOH
564
A
HOH
265
3
HOH
HOH
565
A
HOH
267
3
HOH
HOH
566
A
HOH
269
3
HOH
HOH
567
A
HOH
272
3
HOH
HOH
568
A
HOH
282
3
HOH
HOH
569
A
HOH
284
3
HOH
HOH
570
A
HOH
286
3
HOH
HOH
571
A
HOH
289
3
HOH
HOH
572
A
HOH
291
3
HOH
HOH
573
A
HOH
295
3
HOH
HOH
574
A
HOH
296
3
HOH
HOH
575
A
HOH
299
3
HOH
HOH
576
A
HOH
301
3
HOH
HOH
577
A
HOH
303
3
HOH
HOH
578
A
HOH
306
3
HOH
HOH
579
A
HOH
307
3
HOH
HOH
580
A
HOH
310
3
HOH
HOH
581
A
HOH
312
3
HOH
HOH
582
A
HOH
315
3
HOH
HOH
583
A
HOH
317
3
HOH
HOH
584
A
HOH
319
3
HOH
HOH
585
A
HOH
320
3
HOH
HOH
586
A
HOH
323
3
HOH
HOH
587
A
HOH
325
3
HOH
HOH
588
A
HOH
328
3
HOH
HOH
589
A
HOH
329
3
HOH
HOH
590
A
HOH
331
3
HOH
HOH
591
A
HOH
333
3
HOH
HOH
592
A
HOH
334
3
HOH
HOH
593
A
HOH
339
3
HOH
HOH
594
A
HOH
355
3
HOH
HOH
595
A
HOH
356
3
HOH
HOH
596
A
HOH
357
3
HOH
HOH
597
A
HOH
359
3
HOH
HOH
598
A
HOH
361
3
HOH
HOH
599
A
HOH
363
3
HOH
HOH
600
A
HOH
364
3
HOH
HOH
601
A
HOH
368
3
HOH
HOH
602
A
HOH
371
3
HOH
HOH
603
A
HOH
375
3
HOH
HOH
604
A
HOH
377
3
HOH
HOH
605
A
HOH
379
3
HOH
HOH
606
A
HOH
380
3
HOH
HOH
607
A
HOH
381
3
HOH
HOH
608
A
HOH
382
3
HOH
HOH
609
A
HOH
383
3
HOH
HOH
610
A
HOH
384
3
HOH
HOH
611
A
HOH
386
3
HOH
HOH
612
A
HOH
17
3
HOH
HOH
401
B
HOH
20
3
HOH
HOH
402
B
HOH
22
3
HOH
HOH
403
B
HOH
30
3
HOH
HOH
404
B
HOH
32
3
HOH
HOH
405
B
HOH
36
3
HOH
HOH
406
B
HOH
40
3
HOH
HOH
407
B
HOH
42
3
HOH
HOH
408
B
HOH
44
3
HOH
HOH
409
B
HOH
47
3
HOH
HOH
410
B
HOH
48
3
HOH
HOH
411
B
HOH
51
3
HOH
HOH
412
B
HOH
58
3
HOH
HOH
413
B
HOH
59
3
HOH
HOH
414
B
HOH
60
3
HOH
HOH
415
B
HOH
61
3
HOH
HOH
416
B
HOH
62
3
HOH
HOH
417
B
HOH
73
3
HOH
HOH
418
B
HOH
75
3
HOH
HOH
419
B
HOH
84
3
HOH
HOH
420
B
HOH
88
3
HOH
HOH
421
B
HOH
96
3
HOH
HOH
422
B
HOH
97
3
HOH
HOH
423
B
HOH
98
3
HOH
HOH
424
B
HOH
99
3
HOH
HOH
425
B
HOH
103
3
HOH
HOH
426
B
HOH
106
3
HOH
HOH
427
B
HOH
109
3
HOH
HOH
428
B
HOH
116
3
HOH
HOH
429
B
HOH
118
3
HOH
HOH
430
B
HOH
125
3
HOH
HOH
431
B
HOH
127
3
HOH
HOH
432
B
HOH
128
3
HOH
HOH
433
B
HOH
129
3
HOH
HOH
434
B
HOH
131
3
HOH
HOH
435
B
HOH
132
3
HOH
HOH
436
B
HOH
134
3
HOH
HOH
437
B
HOH
138
3
HOH
HOH
438
B
HOH
147
3
HOH
HOH
439
B
HOH
156
3
HOH
HOH
440
B
HOH
157
3
HOH
HOH
441
B
HOH
160
3
HOH
HOH
442
B
HOH
162
3
HOH
HOH
443
B
HOH
163
3
HOH
HOH
444
B
HOH
167
3
HOH
HOH
445
B
HOH
171
3
HOH
HOH
446
B
HOH
172
3
HOH
HOH
447
B
HOH
173
3
HOH
HOH
448
B
HOH
174
3
HOH
HOH
449
B
HOH
176
3
HOH
HOH
450
B
HOH
177
3
HOH
HOH
451
B
HOH
183
3
HOH
HOH
452
B
HOH
186
3
HOH
HOH
453
B
HOH
187
3
HOH
HOH
454
B
HOH
190
3
HOH
HOH
455
B
HOH
191
3
HOH
HOH
456
B
HOH
193
3
HOH
HOH
457
B
HOH
194
3
HOH
HOH
458
B
HOH
198
3
HOH
HOH
459
B
HOH
199
3
HOH
HOH
460
B
HOH
200
3
HOH
HOH
461
B
HOH
203
3
HOH
HOH
462
B
HOH
207
3
HOH
HOH
463
B
HOH
210
3
HOH
HOH
464
B
HOH
212
3
HOH
HOH
465
B
HOH
214
3
HOH
HOH
466
B
HOH
215
3
HOH
HOH
467
B
HOH
219
3
HOH
HOH
468
B
HOH
221
3
HOH
HOH
469
B
HOH
223
3
HOH
HOH
470
B
HOH
227
3
HOH
HOH
471
B
HOH
228
3
HOH
HOH
472
B
HOH
230
3
HOH
HOH
473
B
HOH
235
3
HOH
HOH
474
B
HOH
249
3
HOH
HOH
475
B
HOH
250
3
HOH
HOH
476
B
HOH
254
3
HOH
HOH
477
B
HOH
264
3
HOH
HOH
478
B
HOH
270
3
HOH
HOH
479
B
HOH
271
3
HOH
HOH
480
B
HOH
273
3
HOH
HOH
481
B
HOH
275
3
HOH
HOH
482
B
HOH
280
3
HOH
HOH
483
B
HOH
281
3
HOH
HOH
484
B
HOH
285
3
HOH
HOH
485
B
HOH
287
3
HOH
HOH
486
B
HOH
288
3
HOH
HOH
487
B
HOH
298
3
HOH
HOH
488
B
HOH
300
3
HOH
HOH
489
B
HOH
302
3
HOH
HOH
490
B
HOH
304
3
HOH
HOH
491
B
HOH
309
3
HOH
HOH
492
B
HOH
311
3
HOH
HOH
493
B
HOH
314
3
HOH
HOH
494
B
HOH
318
3
HOH
HOH
495
B
HOH
326
3
HOH
HOH
496
B
HOH
327
3
HOH
HOH
497
B
HOH
330
3
HOH
HOH
498
B
HOH
332
3
HOH
HOH
499
B
HOH
335
3
HOH
HOH
500
B
HOH
336
3
HOH
HOH
501
B
HOH
337
3
HOH
HOH
502
B
HOH
338
3
HOH
HOH
503
B
HOH
342
3
HOH
HOH
504
B
HOH
343
3
HOH
HOH
505
B
HOH
345
3
HOH
HOH
506
B
HOH
348
3
HOH
HOH
507
B
HOH
358
3
HOH
HOH
508
B
HOH
360
3
HOH
HOH
509
B
HOH
362
3
HOH
HOH
510
B
HOH
365
3
HOH
HOH
511
B
HOH
366
3
HOH
HOH
512
B
HOH
369
3
HOH
HOH
513
B
HOH
370
3
HOH
HOH
514
B
HOH
372
3
HOH
HOH
515
B
HOH
373
3
HOH
HOH
516
B
HOH
376
3
HOH
HOH
517
B
HOH
378
3
HOH
HOH
518
B
HOH
385
3
HOH
HOH
519
B
HOH
49
3
HOH
HOH
101
C
HOH
71
3
HOH
HOH
102
C
HOH
81
3
HOH
HOH
103
C
HOH
107
3
HOH
HOH
104
C
HOH
146
3
HOH
HOH
105
C
HOH
151
3
HOH
HOH
106
C
HOH
192
3
HOH
HOH
107
C
HOH
243
3
HOH
HOH
108
C
HOH
251
3
HOH
HOH
109
C
HOH
255
3
HOH
HOH
110
C
HOH
257
3
HOH
HOH
111
C
HOH
262
3
HOH
HOH
112
C
HOH
266
3
HOH
HOH
113
C
HOH
274
3
HOH
HOH
114
C
HOH
277
3
HOH
HOH
115
C
HOH
278
3
HOH
HOH
116
C
HOH
279
3
HOH
HOH
117
C
HOH
290
3
HOH
HOH
118
C
HOH
293
3
HOH
HOH
119
C
HOH
294
3
HOH
HOH
120
C
HOH
297
3
HOH
HOH
121
C
HOH
313
3
HOH
HOH
122
C
HOH
316
3
HOH
HOH
123
C
HOH
322
3
HOH
HOH
124
C
HOH
324
3
HOH
HOH
125
C
HOH
346
3
HOH
HOH
126
C
HOH
350
3
HOH
HOH
127
C
HOH
351
3
HOH
HOH
128
C
HOH
352
3
HOH
HOH
129
C
HOH
354
3
HOH
HOH
130
C
HOH
374
3
HOH
HOH
131
C
HOH
387
3
HOH
HOH
132
C
HOH
74
3
HOH
HOH
101
D
HOH
87
3
HOH
HOH
102
D
HOH
94
3
HOH
HOH
103
D
HOH
133
3
HOH
HOH
104
D
HOH
148
3
HOH
HOH
105
D
HOH
152
3
HOH
HOH
106
D
HOH
153
3
HOH
HOH
107
D
HOH
184
3
HOH
HOH
108
D
HOH
213
3
HOH
HOH
109
D
HOH
225
3
HOH
HOH
110
D
HOH
268
3
HOH
HOH
111
D
HOH
276
3
HOH
HOH
112
D
HOH
283
3
HOH
HOH
113
D
HOH
292
3
HOH
HOH
114
D
HOH
305
3
HOH
HOH
115
D
HOH
308
3
HOH
HOH
116
D
HOH
321
3
HOH
HOH
117
D
HOH
340
3
HOH
HOH
118
D
HOH
341
3
HOH
HOH
119
D
HOH
344
3
HOH
HOH
120
D
HOH
347
3
HOH
HOH
121
D
HOH
349
3
HOH
HOH
122
D
HOH
353
3
HOH
HOH
123
D
HOH
367
3
HOH
HOH
124
D
GLY
171
n
1
GLY
171
A
ASP
172
n
2
ASP
172
A
GLU
173
n
3
GLU
173
A
LEU
174
n
4
LEU
174
A
TYR
175
n
5
TYR
175
A
ARG
176
n
6
ARG
176
A
GLN
177
n
7
GLN
177
A
SER
178
n
8
SER
178
A
LEU
179
n
9
LEU
179
A
GLU
180
n
10
GLU
180
A
ILE
181
n
11
ILE
181
A
ILE
182
n
12
ILE
182
A
SER
183
n
13
SER
183
A
ARG
184
n
14
ARG
184
A
TYR
185
n
15
TYR
185
A
LEU
186
n
16
LEU
186
A
ARG
187
n
17
ARG
187
A
GLU
188
n
18
GLU
188
A
GLN
189
n
19
GLN
189
A
ALA
190
n
20
ALA
190
A
THR
191
n
21
THR
191
A
GLY
192
n
22
GLY
192
A
ALA
193
n
23
ALA
193
A
LYS
194
n
24
LYS
194
A
ASP
195
n
25
ASP
195
A
THR
196
n
26
THR
196
A
LYS
197
n
27
LYS
197
A
PRO
198
n
28
PRO
198
A
MET
199
n
29
MET
199
A
GLY
200
n
30
GLY
200
A
ARG
201
n
31
ARG
201
A
SER
202
n
32
SER
202
A
GLY
203
n
33
GLY
203
A
ALA
204
n
34
ALA
204
A
THR
205
n
35
THR
205
A
SER
206
n
36
SER
206
A
ARG
207
n
37
ARG
207
A
LYS
208
n
38
LYS
208
A
ALA
209
n
39
ALA
209
A
LEU
210
n
40
LEU
210
A
GLU
211
n
41
GLU
211
A
THR
212
n
42
THR
212
A
LEU
213
n
43
LEU
213
A
ARG
214
n
44
ARG
214
A
ARG
215
n
45
ARG
215
A
VAL
216
n
46
VAL
216
A
GLY
217
n
47
GLY
217
A
ASP
218
n
48
ASP
218
A
GLY
219
n
49
GLY
219
A
VAL
220
n
50
VAL
220
A
GLN
221
n
51
GLN
221
A
ARG
222
n
52
ARG
222
A
ASN
223
n
53
ASN
223
A
HIS
224
n
54
HIS
224
A
GLU
225
n
55
GLU
225
A
THR
226
n
56
THR
226
A
ALA
227
n
57
ALA
227
A
PHE
228
n
58
PHE
228
A
GLN
229
n
59
GLN
229
A
GLY
230
n
60
GLY
230
A
MET
231
n
61
MET
231
A
LEU
232
n
62
LEU
232
A
ARG
233
n
63
ARG
233
A
LYS
234
n
64
LYS
234
A
LEU
235
n
65
LEU
235
A
ASP
236
n
66
ASP
236
A
ILE
237
n
67
ILE
237
A
LYS
238
n
68
LYS
238
A
ASN
239
n
69
ASN
239
A
GLU
240
n
70
GLU
240
A
ASP
241
n
71
ASP
241
A
ASP
242
n
72
ASP
242
A
VAL
243
n
73
VAL
243
A
LYS
244
n
74
LYS
244
A
SER
245
n
75
SER
245
A
LEU
246
n
76
LEU
246
A
SER
247
n
77
SER
247
A
ARG
248
n
78
ARG
248
A
VAL
249
n
79
VAL
249
A
MET
250
n
80
MET
250
A
ILE
251
n
81
ILE
251
A
HIS
252
n
82
HIS
252
A
VAL
253
n
83
VAL
253
A
PHE
254
n
84
PHE
254
A
SER
255
n
85
SER
255
A
ASP
256
n
86
ASP
256
A
GLY
257
n
87
GLY
257
A
VAL
258
n
88
VAL
258
A
THR
259
n
89
THR
259
A
ASN
260
n
90
ASN
260
A
TRP
261
n
91
TRP
261
A
GLY
262
n
92
GLY
262
A
ARG
263
n
93
ARG
263
A
ILE
264
n
94
ILE
264
A
VAL
265
n
95
VAL
265
A
THR
266
n
96
THR
266
A
LEU
267
n
97
LEU
267
A
ILE
268
n
98
ILE
268
A
SER
269
n
99
SER
269
A
PHE
270
n
100
PHE
270
A
GLY
271
n
101
GLY
271
A
ALA
272
n
102
ALA
272
A
PHE
273
n
103
PHE
273
A
VAL
274
n
104
VAL
274
A
ALA
275
n
105
ALA
275
A
LYS
276
n
106
LYS
276
A
HIS
277
n
107
HIS
277
A
LEU
278
n
108
LEU
278
A
LYS
279
n
109
LYS
279
A
THR
280
n
110
THR
280
A
ILE
281
n
111
ILE
281
A
ASN
282
n
112
ASN
282
A
GLN
283
n
113
GLN
283
A
GLU
284
n
114
GLU
284
A
SER
285
n
115
SER
285
A
CYS
286
n
116
CYS
286
A
ILE
287
n
117
ILE
287
A
GLU
288
n
118
GLU
288
A
PRO
289
n
119
PRO
289
A
LEU
290
n
120
LEU
290
A
ALA
291
n
121
ALA
291
A
GLU
292
n
122
GLU
292
A
SER
293
n
123
SER
293
A
ILE
294
n
124
ILE
294
A
THR
295
n
125
THR
295
A
ASP
296
n
126
ASP
296
A
VAL
297
n
127
VAL
297
A
LEU
298
n
128
LEU
298
A
VAL
299
n
129
VAL
299
A
ARG
300
n
130
ARG
300
A
THR
301
n
131
THR
301
A
LYS
302
n
132
LYS
302
A
ARG
303
n
133
ARG
303
A
ASP
304
n
134
ASP
304
A
TRP
305
n
135
TRP
305
A
LEU
306
n
136
LEU
306
A
VAL
307
n
137
VAL
307
A
LYS
308
n
138
LYS
308
A
GLN
309
n
139
GLN
309
A
ARG
310
n
140
ARG
310
A
GLY
311
n
141
GLY
311
A
TRP
312
n
142
TRP
312
A
ASP
313
n
143
ASP
313
A
GLY
314
n
144
GLY
314
A
PHE
315
n
145
PHE
315
A
VAL
316
n
146
VAL
316
A
GLU
317
n
147
GLU
317
A
PHE
318
n
148
PHE
318
A
PHE
319
n
149
PHE
319
A
HIS
320
n
150
HIS
320
A
VAL
321
n
151
VAL
321
A
ALA
322
n
152
GLU
322
A
ALA
323
n
153
ASP
323
A
ALA
324
n
154
LEU
324
A
n
155
325
A
n
156
326
A
n
157
327
A
GLY
171
n
1
GLY
171
B
ASP
172
n
2
ASP
172
B
GLU
173
n
3
GLU
173
B
LEU
174
n
4
LEU
174
B
TYR
175
n
5
TYR
175
B
ARG
176
n
6
ARG
176
B
GLN
177
n
7
GLN
177
B
SER
178
n
8
SER
178
B
LEU
179
n
9
LEU
179
B
GLU
180
n
10
GLU
180
B
ILE
181
n
11
ILE
181
B
ILE
182
n
12
ILE
182
B
SER
183
n
13
SER
183
B
ARG
184
n
14
ARG
184
B
TYR
185
n
15
TYR
185
B
LEU
186
n
16
LEU
186
B
ARG
187
n
17
ARG
187
B
GLU
188
n
18
GLU
188
B
GLN
189
n
19
GLN
189
B
ALA
190
n
20
ALA
190
B
THR
191
n
21
THR
191
B
GLY
192
n
22
GLY
192
B
n
23
193
B
n
24
194
B
n
25
195
B
n
26
196
B
n
27
197
B
n
28
198
B
n
29
199
B
n
30
200
B
n
31
201
B
n
32
202
B
GLY
203
n
33
GLY
203
B
ALA
204
n
34
ALA
204
B
THR
205
n
35
THR
205
B
SER
206
n
36
SER
206
B
ARG
207
n
37
ARG
207
B
LYS
208
n
38
LYS
208
B
ALA
209
n
39
ALA
209
B
LEU
210
n
40
LEU
210
B
GLU
211
n
41
GLU
211
B
THR
212
n
42
THR
212
B
LEU
213
n
43
LEU
213
B
ARG
214
n
44
ARG
214
B
ARG
215
n
45
ARG
215
B
VAL
216
n
46
VAL
216
B
GLY
217
n
47
GLY
217
B
ASP
218
n
48
ASP
218
B
GLY
219
n
49
GLY
219
B
VAL
220
n
50
VAL
220
B
GLN
221
n
51
GLN
221
B
ARG
222
n
52
ARG
222
B
ASN
223
n
53
ASN
223
B
HIS
224
n
54
HIS
224
B
GLU
225
n
55
GLU
225
B
THR
226
n
56
THR
226
B
ALA
227
n
57
ALA
227
B
PHE
228
n
58
PHE
228
B
GLN
229
n
59
GLN
229
B
GLY
230
n
60
GLY
230
B
MET
231
n
61
MET
231
B
LEU
232
n
62
LEU
232
B
ARG
233
n
63
ARG
233
B
LYS
234
n
64
LYS
234
B
LEU
235
n
65
LEU
235
B
ASP
236
n
66
ASP
236
B
ILE
237
n
67
ILE
237
B
LYS
238
n
68
LYS
238
B
ASN
239
n
69
ASN
239
B
GLU
240
n
70
GLU
240
B
ASP
241
n
71
ASP
241
B
ASP
242
n
72
ASP
242
B
VAL
243
n
73
VAL
243
B
LYS
244
n
74
LYS
244
B
SER
245
n
75
SER
245
B
LEU
246
n
76
LEU
246
B
SER
247
n
77
SER
247
B
ARG
248
n
78
ARG
248
B
VAL
249
n
79
VAL
249
B
MET
250
n
80
MET
250
B
ILE
251
n
81
ILE
251
B
HIS
252
n
82
HIS
252
B
VAL
253
n
83
VAL
253
B
PHE
254
n
84
PHE
254
B
SER
255
n
85
SER
255
B
ASP
256
n
86
ASP
256
B
GLY
257
n
87
GLY
257
B
VAL
258
n
88
VAL
258
B
THR
259
n
89
THR
259
B
ASN
260
n
90
ASN
260
B
TRP
261
n
91
TRP
261
B
GLY
262
n
92
GLY
262
B
ARG
263
n
93
ARG
263
B
ILE
264
n
94
ILE
264
B
VAL
265
n
95
VAL
265
B
THR
266
n
96
THR
266
B
LEU
267
n
97
LEU
267
B
ILE
268
n
98
ILE
268
B
SER
269
n
99
SER
269
B
PHE
270
n
100
PHE
270
B
GLY
271
n
101
GLY
271
B
ALA
272
n
102
ALA
272
B
PHE
273
n
103
PHE
273
B
VAL
274
n
104
VAL
274
B
ALA
275
n
105
ALA
275
B
LYS
276
n
106
LYS
276
B
HIS
277
n
107
HIS
277
B
LEU
278
n
108
LEU
278
B
LYS
279
n
109
LYS
279
B
THR
280
n
110
THR
280
B
ILE
281
n
111
ILE
281
B
ASN
282
n
112
ASN
282
B
GLN
283
n
113
GLN
283
B
GLU
284
n
114
GLU
284
B
SER
285
n
115
SER
285
B
CYS
286
n
116
CYS
286
B
ILE
287
n
117
ILE
287
B
GLU
288
n
118
GLU
288
B
PRO
289
n
119
PRO
289
B
LEU
290
n
120
LEU
290
B
ALA
291
n
121
ALA
291
B
GLU
292
n
122
GLU
292
B
SER
293
n
123
SER
293
B
ILE
294
n
124
ILE
294
B
THR
295
n
125
THR
295
B
ASP
296
n
126
ASP
296
B
VAL
297
n
127
VAL
297
B
LEU
298
n
128
LEU
298
B
VAL
299
n
129
VAL
299
B
ARG
300
n
130
ARG
300
B
THR
301
n
131
THR
301
B
LYS
302
n
132
LYS
302
B
ARG
303
n
133
ARG
303
B
ASP
304
n
134
ASP
304
B
TRP
305
n
135
TRP
305
B
LEU
306
n
136
LEU
306
B
VAL
307
n
137
VAL
307
B
LYS
308
n
138
LYS
308
B
GLN
309
n
139
GLN
309
B
ARG
310
n
140
ARG
310
B
GLY
311
n
141
GLY
311
B
TRP
312
n
142
TRP
312
B
ASP
313
n
143
ASP
313
B
GLY
314
n
144
GLY
314
B
PHE
315
n
145
PHE
315
B
VAL
316
n
146
VAL
316
B
GLU
317
n
147
GLU
317
B
PHE
318
n
148
PHE
318
B
PHE
319
n
149
PHE
319
B
HIS
320
n
150
HIS
320
B
VAL
321
n
151
VAL
321
B
n
152
322
B
n
153
323
B
n
154
324
B
n
155
325
B
n
156
326
B
n
157
327
B
ACE
0
n
1
ACE
0
C
ALA
1
n
2
ALA
1
C
LEU
2
n
3
LEU
2
C
GLU
3
n
4
GLU
3
C
THR
4
n
5
THR
4
C
LEU
5
n
6
LEU
5
C
ARG
6
n
7
ARG
6
C
ARG
7
n
8
ARG
7
C
VAL
8
n
9
VAL
8
C
GLY
9
n
10
GLY
9
C
ASP
10
n
11
ASP
10
C
GLY
11
n
12
GLY
11
C
VAL
12
n
13
VAL
12
C
GLN
13
n
14
GLN
13
C
ARG
14
n
15
ARG
14
C
ASN
15
n
16
ASN
15
C
HIS
16
n
17
HIS
16
C
NME
0
n
18
NH2
17
C
ACE
0
n
1
ACE
0
D
ALA
1
n
2
ALA
1
D
LEU
2
n
3
LEU
2
D
GLU
3
n
4
GLU
3
D
THR
4
n
5
THR
4
D
LEU
5
n
6
LEU
5
D
ARG
6
n
7
ARG
6
D
ARG
7
n
8
ARG
7
D
VAL
8
n
9
VAL
8
D
GLY
9
n
10
GLY
9
D
ASP
10
n
11
ASP
10
D
GLY
11
n
12
GLY
11
D
VAL
12
n
13
VAL
12
D
GLN
13
n
14
GLN
13
D
ARG
14
n
15
ARG
14
D
ASN
15
n
16
ASN
15
D
HIS
16
n
17
HIS
16
D
NME
0
n
18
NH2
17
D
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
1830
-13
8650
1830
-12
7830
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
GLU
322
A
CG
GLU
152
1
Y
1
A
CD
GLU
322
A
CD
GLU
152
1
Y
1
A
OE1
GLU
322
A
OE1
GLU
152
1
Y
1
A
OE2
GLU
322
A
OE2
GLU
152
1
Y
1
A
CG
ASP
323
A
CG
ASP
153
1
Y
1
A
OD1
ASP
323
A
OD1
ASP
153
1
Y
1
A
OD2
ASP
323
A
OD2
ASP
153
1
Y
1
A
CG
LEU
324
A
CG
LEU
154
1
Y
1
A
CD1
LEU
324
A
CD1
LEU
154
1
Y
1
A
CD2
LEU
324
A
CD2
LEU
154
1
Y
1
A
GLU
325
A
GLU
155
1
Y
1
A
GLY
326
A
GLY
156
1
Y
1
A
GLY
327
A
GLY
157
1
Y
1
B
ALA
193
B
ALA
23
1
Y
1
B
LYS
194
B
LYS
24
1
Y
1
B
ASP
195
B
ASP
25
1
Y
1
B
THR
196
B
THR
26
1
Y
1
B
LYS
197
B
LYS
27
1
Y
1
B
PRO
198
B
PRO
28
1
Y
1
B
MET
199
B
MET
29
1
Y
1
B
GLY
200
B
GLY
30
1
Y
1
B
ARG
201
B
ARG
31
1
Y
1
B
SER
202
B
SER
32
1
Y
1
B
GLU
322
B
GLU
152
1
Y
1
B
ASP
323
B
ASP
153
1
Y
1
B
LEU
324
B
LEU
154
1
Y
1
B
GLU
325
B
GLU
155
1
Y
1
B
GLY
326
B
GLY
156
1
Y
1
B
GLY
327
B
GLY
157
1
Y
1
A
A
O
O
ILE
HOH
281
607
1.82
1
A
A
O
O
HOH
HOH
437
607
1.88
1
C
C
O
O
HOH
HOH
121
123
1.88
1
A
B
O
O
HOH
HOH
571
485
1.88
1
A
B
O
O
HOH
HOH
611
505
1.90
1
A
A
O
O
HOH
HOH
597
600
1.93
1
A
A
O
O
HOH
HOH
594
602
1.96
1
A
A
O
O
HOH
HOH
606
609
1.97
1
B
B
O
O
HOH
HOH
487
488
1.98
1
B
D
O
O
HOH
HOH
517
113
1.99
1
A
A
O
O
HOH
HOH
569
599
2.00
1
B
B
O
O
THR
HOH
191
518
2.01
1
A
A
O
O
HOH
HOH
591
600
2.03
1
A
A
O
O
HOH
HOH
545
577
2.10
1
B
B
O
O
GLY
HOH
203
492
2.14
1
C
C
O
O
HOH
HOH
128
130
2.15
1
A
A
C
O
ASN
HOH
282
607
2.15
1
B
B
C
O
THR
HOH
191
518
2.17
1
B
B
O
O
HOH
HOH
490
508
2.18
1
16.87
1.60
122.70
139.57
C
C
C
O
C
N
ACE
ACE
ALA
0
0
1
Y
1
16.52
2.50
121.70
138.22
C
C
C
C
N
CA
ACE
ALA
ALA
0
1
1
Y
1
B
D
O
O
HOH
HOH
515
124
1.45
1_555
2_454
1
A
C
O
O
HOH
HOH
575
116
1.81
1_555
2_455
1
A
ARG
300
-124.53
-70.05
1
B
THR
191
-112.78
-114.07
1
B
ARG
310
70.73
30.35
0.1840
0.1374
0.1398
0.1398
1.530
34.744
2495
49292
49292
5.06
99.92
0.14
RANDOM
1
1.38
MOLECULAR REPLACEMENT
19.41
0.90
1.11
Engh & Huber
FLAT BULK SOLVENT MODEL
1.530
34.744
387
3014
0
0
2627
0.008
2697
1.005
3621
13.175
1017
0.053
404
0.005
467
0.2524
0.1942
1.5592
132
2602
99.00
0.2471
0.1694
1.5911
133
2542
100.00
0.2340
0.1527
1.6257
131
2627
100.00
0.2328
0.1490
1.6635
135
2597
100.00
0.2038
0.1418
1.7051
144
2568
100.00
0.2051
0.1372
1.7512
124
2570
100.00
0.2188
0.1288
1.8027
148
2580
100.00
0.1954
0.1262
1.8609
149
2625
100.00
0.1949
0.1259
1.9274
157
2552
100.00
0.1833
0.1246
2.0045
140
2587
100.00
0.1893
0.1218
2.0958
142
2604
100.00
0.1888
0.1129
2.2062
116
2597
100.00
0.1754
0.1177
2.3444
143
2582
100.00
0.1754
0.1268
2.5254
144
2625
100.00
0.2016
0.1302
2.7794
152
2601
100.00
0.1686
0.1400
3.1814
128
2614
100.00
0.1641
0.1304
4.0073
133
2640
100.00
0.1674
0.1659
34.7534
144
2684
99.00
1.53
50
4HW4
49398
49398
1
1
0.047
0.042
1
100
0.313
1.53
1.56
2.46
2464
0.408
1
3.4
100
data collection
HKL-2000
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.8_1069)
data reduction
HKL-2000
data scaling
HKL-2000
Induced myeloid leukemia cell differentiation protein Mcl-1, Mcl-1 BH3 peptide
Discovery of potent Mcl-1 inhibitors using fragment-based methods and structure-based design
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
ASP
172
A
ASP
2
HELX_P
A
GLY
192
A
GLY
22
1
1
21
A
SER
202
A
SER
32
HELX_P
A
HIS
224
A
HIS
54
1
2
23
A
HIS
224
A
HIS
54
HELX_P
A
ASP
236
A
ASP
66
1
3
13
A
ASN
239
A
ASN
69
HELX_P
A
PHE
254
A
PHE
84
1
4
16
A
SER
255
A
SER
85
HELX_P
A
GLY
257
A
GLY
87
5
5
3
A
ASN
260
A
ASN
90
HELX_P
A
ILE
281
A
ILE
111
1
6
22
A
GLN
283
A
GLN
113
HELX_P
A
SER
285
A
SER
115
5
7
3
A
CYS
286
A
CYS
116
HELX_P
A
ARG
300
A
ARG
130
1
8
15
A
LYS
302
A
LYS
132
HELX_P
A
GLN
309
A
GLN
139
1
9
8
A
ARG
310
A
ARG
140
HELX_P
A
HIS
320
A
HIS
150
1
10
11
B
ASP
172
B
ASP
2
HELX_P
B
THR
191
B
THR
21
1
11
20
B
ALA
204
B
ALA
34
HELX_P
B
HIS
224
B
HIS
54
1
12
21
B
HIS
224
B
HIS
54
HELX_P
B
ASP
236
B
ASP
66
1
13
13
B
ASN
239
B
ASN
69
HELX_P
B
PHE
254
B
PHE
84
1
14
16
B
SER
255
B
SER
85
HELX_P
B
GLY
257
B
GLY
87
5
15
3
B
ASN
260
B
ASN
90
HELX_P
B
ILE
281
B
ILE
111
1
16
22
B
GLN
283
B
GLN
113
HELX_P
B
SER
285
B
SER
115
5
17
3
B
CYS
286
B
CYS
116
HELX_P
B
LYS
302
B
LYS
132
1
18
17
B
LYS
302
B
LYS
132
HELX_P
B
GLN
309
B
GLN
139
1
19
8
B
ARG
310
B
ARG
140
HELX_P
B
PHE
319
B
PHE
149
1
20
10
C
ALA
1
C
ALA
2
HELX_P
C
HIS
16
C
HIS
17
1
21
16
D
ALA
1
D
ALA
2
HELX_P
D
HIS
16
D
HIS
17
1
22
16
covale
1.346
C
ACE
0
C
C
ACE
1
1_555
C
ALA
1
C
N
ALA
2
1_555
covale
1.340
C
HIS
16
C
C
HIS
17
1_555
C
NH2
17
C
N
NH2
18
1_555
covale
1.331
D
ACE
0
D
C
ACE
1
1_555
D
ALA
1
D
N
ALA
2
1_555
covale
1.334
D
HIS
16
D
C
HIS
17
1_555
D
NH2
17
D
N
NH2
18
1_555
APOPTOSIS
Anti-apoptotic protein, BH3 peptides, APOPTOSIS
MCL1_HUMAN
UNP
1
172
Q07820
DELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMI
HVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG
4HW4
PDB
2
4HW4
172
327
4HW4
172
327
Q07820
A
1
2
157
172
327
4HW4
172
327
Q07820
B
1
2
157
0
17
4HW4
0
17
4HW4
C
2
1
18
0
17
4HW4
0
17
4HW4
D
2
1
18
1
EXPRESSION TAG
GLY
171
4HW4
A
Q07820
UNP
1
2
EXPRESSION TAG
GLY
171
4HW4
B
Q07820
UNP
1
4
P 1 21 1