0.009862
0.005694
0.000000
0.000000
0.011387
0.000000
0.000000
0.000000
0.002222
0.00000
0.00000
0.00000
Xiong, X.
Coombs, P.
Martin, S.R.
Liu, J.
Xiao, H.
McCauley, J.W.
Locher, K.
Walker, P.A.
Collins, P.J.
Kawaoka, Y.
Skehel, J.J.
Gamblin, S.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
101.403
101.403
449.997
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C8 H18 N2 O4 S
238.305
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES
non-polymer
C6 H12 O6
180.156
beta-D-galactopyranose
D-saccharide, beta linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H19 N O9
309.270
N-acetyl-alpha-neuraminic acid
D-saccharide, alpha linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Nature
NATUAS
0006
0028-0836
497
392
10.1038/NATURE12144
23615615
Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus.
2013
NAG F 1 HAS WRONG CHIRALITY AT ATOM C1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
PIXEL
2012-04-23
DECTRIS PILATUS 2M
SINGLE WAVELENGTH
M
x-ray
1
0.9173
1.0
I04-1
Diamond
0.9173
SYNCHROTRON
DIAMOND BEAMLINE I04-1
36950.766
HEMAGGLUTININ
HA1 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 17-340
1
nat
polymer
19097.990
HEMAGGLUTININ
HA2 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 347-512
1
nat
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
3
man
branched
674.604
N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
238.305
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
1
syn
non-polymer
18.015
water
133
nat
water
HAEMAGGLUTININ HA1
HAEMAGGLUTININ HA2
3'-sialyl-N-acetyllactosamine
no
no
DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIV
EKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTI
KRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAIN
FESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNS
PQRETR
DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIV
EKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTI
KRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAIN
FESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNS
PQRETR
A
polypeptide(L)
no
no
GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL
NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYP
QYSEEA
GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL
NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYP
QYSEEA
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
THE NATIONAL INSTITUTE FOR BIOLOGICAL STANDARDS AND CONTROL (NIBSC)
sample
644788
INFLUENZA VIRUS
A/VN/1194/04/NIBRG14 VACCINE STRAIN
A/VIETNAM/1194/2004 (H5N1)
THE NATIONAL INSTITUTE FOR BIOLOGICAL STANDARDS AND CONTROL (NIBSC)
sample
644788
INFLUENZA VIRUS
A/VN/1194/04/NIBRG14 VACCINE STRAIN
A/VIETNAM/1194/2004 (H5N1)
1
3.97
69.03
NONE
0.1 M HEPES PH 7.0, 0.05 M MGCL2, 28-30% PEG 550
atom_site
chem_comp
database_PDB_caveat
entity
entity_name_com
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_database_status
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_molecule_features
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_special_symmetry
pdbx_validate_chiral
struct_asym
struct_conn
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Refinement description
Database references
Database references
Advisory
Atomic model
Data collection
Derived calculations
Other
Structure summary
1
0
2013-04-24
1
1
2013-05-08
1
2
2013-05-15
1
3
2013-05-22
2
0
2020-07-29
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_database_PDB_caveat.text
_pdbx_database_status.status_code_sf
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_validate_chiral.auth_asym_id
_pdbx_validate_chiral.auth_seq_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
A
NAG
1322
n
C
NAG
1
A
NAG
1323
n
C
NAG
2
A
NAG
1324
n
D
NAG
1
A
NAG
1325
n
D
NAG
2
A
NAG
1328
n
E
NAG
1
A
GAL
1327
n
E
GAL
2
A
SIA
1326
n
E
SIA
3
B
NAG
1163
n
F
NAG
1
B
NAG
1164
n
F
NAG
2
DGalpb
b-D-galactopyranose
b-D-Galp
Gal
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
DNeup5Aca
N-acetyl-a-D-neuraminic acid
a-D-Neup5Ac
Neu5Ac
STRUCTURE OF H5 (VN1194) INFLUENZA HAEMAGGLUTININ
H5 (VN1194) INFLUENZA VIRUS HAEMAGGLUTININ IN COMPLEX WITH HUMAN RECEPTOR ANALOGUE 6'-SLN
CRYSTAL STRUCTURE OF H5 (TYTY) INFLUENZA VIRUS HAEMAGGLUTININ
H5 (TYTY) INFLUENZA VIRUS HAEMAGGLUTININ IN COMPLEX WITH HUMAN RECEPTOR ANALOGUE 6'-SLN
H5 (TYTY) INFLUENZA VIRUS HAEMAGGLUTININ IN COMPLEX WITH AVIAN RECEPTOR ANALOGUE 3'-SLN
CRYSTAL STRUCTURE OF THE HAEMAGGLUTININ FROM A TRANSMISSIBLE MUTANT H5 INFLUENZA VIRUS
HAEMAGGLUTININ FROM A TRANSMISSIBLE MUTANT H5 INFLUENZA VIRUS IN COMPLEX WITH HUMAN RECEPTOR ANALOGUE 6'-SLN
HAEMAGGLUTININ FROM A TRANSMISSIBLE MUTANT H5 INFLUENZA VIRUS IN COMPLEX WITH AVIAN RECEPTOR ANALOGUE 3'-SLN
PDBE
Y
PDBE
2013-03-29
REL
REL
oligosaccharide
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
3
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
3
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
3
PDB-CARE
LINUCS
DNeup5Aca2-3DGalpb1-4DGlcpNAcb1-ROH
4
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/3,3,2/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a4-b1_b3-c2
4
PDB2Glycan
1.1.0
WURCS
[][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{[(3+2)][a-D-Neup5Ac]{}}}
4
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
3
O1
HO4
sing
C1
O4
GAL
NAG
2
1
4
O1
HO4
sing
C2
O3
SIA
GAL
3
2
4
O2
HO3
sing
n
n
n
n
n
EPE
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HOH
water
MULTIBASIC SITE REMOVED
Substrate analog
oligosaccharide
3'-sialyl-N-acetyllactosamine
Oligosaccharide
EPE
1165
5
EPE
EPE
1165
B
HOH
2001
6
HOH
HOH
2001
A
HOH
2002
6
HOH
HOH
2002
A
HOH
2003
6
HOH
HOH
2003
A
HOH
2004
6
HOH
HOH
2004
A
HOH
2005
6
HOH
HOH
2005
A
HOH
2006
6
HOH
HOH
2006
A
HOH
2007
6
HOH
HOH
2007
A
HOH
2008
6
HOH
HOH
2008
A
HOH
2009
6
HOH
HOH
2009
A
HOH
2010
6
HOH
HOH
2010
A
HOH
2011
6
HOH
HOH
2011
A
HOH
2012
6
HOH
HOH
2012
A
HOH
2013
6
HOH
HOH
2013
A
HOH
2014
6
HOH
HOH
2014
A
HOH
2015
6
HOH
HOH
2015
A
HOH
2016
6
HOH
HOH
2016
A
HOH
2017
6
HOH
HOH
2017
A
HOH
2018
6
HOH
HOH
2018
A
HOH
2019
6
HOH
HOH
2019
A
HOH
2020
6
HOH
HOH
2020
A
HOH
2021
6
HOH
HOH
2021
A
HOH
2022
6
HOH
HOH
2022
A
HOH
2023
6
HOH
HOH
2023
A
HOH
2024
6
HOH
HOH
2024
A
HOH
2025
6
HOH
HOH
2025
A
HOH
2026
6
HOH
HOH
2026
A
HOH
2027
6
HOH
HOH
2027
A
HOH
2028
6
HOH
HOH
2028
A
HOH
2029
6
HOH
HOH
2029
A
HOH
2030
6
HOH
HOH
2030
A
HOH
2031
6
HOH
HOH
2031
A
HOH
2032
6
HOH
HOH
2032
A
HOH
2033
6
HOH
HOH
2033
A
HOH
2034
6
HOH
HOH
2034
A
HOH
2035
6
HOH
HOH
2035
A
HOH
2036
6
HOH
HOH
2036
A
HOH
2037
6
HOH
HOH
2037
A
HOH
2038
6
HOH
HOH
2038
A
HOH
2039
6
HOH
HOH
2039
A
HOH
2040
6
HOH
HOH
2040
A
HOH
2041
6
HOH
HOH
2041
A
HOH
2042
6
HOH
HOH
2042
A
HOH
2043
6
HOH
HOH
2043
A
HOH
2044
6
HOH
HOH
2044
A
HOH
2045
6
HOH
HOH
2045
A
HOH
2046
6
HOH
HOH
2046
A
HOH
2047
6
HOH
HOH
2047
A
HOH
2048
6
HOH
HOH
2048
A
HOH
2049
6
HOH
HOH
2049
A
HOH
2050
6
HOH
HOH
2050
A
HOH
2051
6
HOH
HOH
2051
A
HOH
2052
6
HOH
HOH
2052
A
HOH
2053
6
HOH
HOH
2053
A
HOH
2054
6
HOH
HOH
2054
A
HOH
2055
6
HOH
HOH
2055
A
HOH
2056
6
HOH
HOH
2056
A
HOH
2057
6
HOH
HOH
2057
A
HOH
2058
6
HOH
HOH
2058
A
HOH
2059
6
HOH
HOH
2059
A
HOH
2060
6
HOH
HOH
2060
A
HOH
2061
6
HOH
HOH
2061
A
HOH
2062
6
HOH
HOH
2062
A
HOH
2063
6
HOH
HOH
2063
A
HOH
2064
6
HOH
HOH
2064
A
HOH
2065
6
HOH
HOH
2065
A
HOH
2066
6
HOH
HOH
2066
A
HOH
2067
6
HOH
HOH
2067
A
HOH
2068
6
HOH
HOH
2068
A
HOH
2069
6
HOH
HOH
2069
A
HOH
2070
6
HOH
HOH
2070
A
HOH
2071
6
HOH
HOH
2071
A
HOH
2072
6
HOH
HOH
2072
A
HOH
2073
6
HOH
HOH
2073
A
HOH
2001
6
HOH
HOH
2001
B
HOH
2002
6
HOH
HOH
2002
B
HOH
2003
6
HOH
HOH
2003
B
HOH
2004
6
HOH
HOH
2004
B
HOH
2005
6
HOH
HOH
2005
B
HOH
2006
6
HOH
HOH
2006
B
HOH
2007
6
HOH
HOH
2007
B
HOH
2008
6
HOH
HOH
2008
B
HOH
2009
6
HOH
HOH
2009
B
HOH
2010
6
HOH
HOH
2010
B
HOH
2011
6
HOH
HOH
2011
B
HOH
2012
6
HOH
HOH
2012
B
HOH
2013
6
HOH
HOH
2013
B
HOH
2014
6
HOH
HOH
2014
B
HOH
2015
6
HOH
HOH
2015
B
HOH
2016
6
HOH
HOH
2016
B
HOH
2017
6
HOH
HOH
2017
B
HOH
2018
6
HOH
HOH
2018
B
HOH
2019
6
HOH
HOH
2019
B
HOH
2020
6
HOH
HOH
2020
B
HOH
2021
6
HOH
HOH
2021
B
HOH
2022
6
HOH
HOH
2022
B
HOH
2023
6
HOH
HOH
2023
B
HOH
2024
6
HOH
HOH
2024
B
HOH
2025
6
HOH
HOH
2025
B
HOH
2026
6
HOH
HOH
2026
B
HOH
2027
6
HOH
HOH
2027
B
HOH
2028
6
HOH
HOH
2028
B
HOH
2029
6
HOH
HOH
2029
B
HOH
2030
6
HOH
HOH
2030
B
HOH
2031
6
HOH
HOH
2031
B
HOH
2032
6
HOH
HOH
2032
B
HOH
2033
6
HOH
HOH
2033
B
HOH
2034
6
HOH
HOH
2034
B
HOH
2035
6
HOH
HOH
2035
B
HOH
2036
6
HOH
HOH
2036
B
HOH
2037
6
HOH
HOH
2037
B
HOH
2038
6
HOH
HOH
2038
B
HOH
2039
6
HOH
HOH
2039
B
HOH
2040
6
HOH
HOH
2040
B
HOH
2041
6
HOH
HOH
2041
B
HOH
2042
6
HOH
HOH
2042
B
HOH
2043
6
HOH
HOH
2043
B
HOH
2044
6
HOH
HOH
2044
B
HOH
2045
6
HOH
HOH
2045
B
HOH
2046
6
HOH
HOH
2046
B
HOH
2047
6
HOH
HOH
2047
B
HOH
2048
6
HOH
HOH
2048
B
HOH
2049
6
HOH
HOH
2049
B
HOH
2050
6
HOH
HOH
2050
B
HOH
2051
6
HOH
HOH
2051
B
HOH
2052
6
HOH
HOH
2052
B
HOH
2053
6
HOH
HOH
2053
B
HOH
2054
6
HOH
HOH
2054
B
HOH
2055
6
HOH
HOH
2055
B
HOH
2056
6
HOH
HOH
2056
B
HOH
2057
6
HOH
HOH
2057
B
HOH
2058
6
HOH
HOH
2058
B
HOH
2059
6
HOH
HOH
2059
B
HOH
2060
6
HOH
HOH
2060
B
ASP
1
n
1
ASP
1
A
GLN
2
n
2
GLN
2
A
ILE
3
n
3
ILE
3
A
CYS
4
n
4
CYS
4
A
ILE
5
n
5
ILE
5
A
GLY
6
n
6
GLY
6
A
TYR
7
n
7
TYR
7
A
HIS
8
n
8
HIS
8
A
ALA
9
n
9
ALA
9
A
ASN
10
n
10
ASN
10
A
ASN
11
n
11
ASN
11
A
SER
12
n
12
SER
12
A
THR
13
n
13
THR
13
A
GLU
14
n
14
GLU
14
A
GLN
15
n
15
GLN
15
A
VAL
16
n
16
VAL
16
A
ASP
17
n
17
ASP
17
A
THR
18
n
18
THR
18
A
ILE
19
n
19
ILE
19
A
MET
20
n
20
MET
20
A
GLU
21
n
21
GLU
21
A
LYS
22
n
22
LYS
22
A
ASN
23
n
23
ASN
23
A
VAL
24
n
24
VAL
24
A
THR
25
n
25
THR
25
A
VAL
26
n
26
VAL
26
A
THR
27
n
27
THR
27
A
HIS
28
n
28
HIS
28
A
ALA
29
n
29
ALA
29
A
GLN
30
n
30
GLN
30
A
ASP
31
n
31
ASP
31
A
ILE
32
n
32
ILE
32
A
LEU
33
n
33
LEU
33
A
GLU
34
n
34
GLU
34
A
LYS
35
n
35
LYS
35
A
THR
36
n
36
THR
36
A
HIS
37
n
37
HIS
37
A
ASN
38
n
38
ASN
38
A
GLY
39
n
39
GLY
39
A
LYS
40
n
40
LYS
40
A
LEU
41
n
41
LEU
41
A
CYS
42
n
42
CYS
42
A
ASP
43
n
43
ASP
43
A
LEU
44
n
44
LEU
44
A
ASP
45
n
45
ASP
45
A
GLY
46
n
46
GLY
46
A
VAL
47
n
47
VAL
47
A
LYS
48
n
48
LYS
48
A
PRO
49
n
49
PRO
49
A
LEU
50
n
50
LEU
50
A
ILE
51
n
51
ILE
51
A
LEU
52
n
52
LEU
52
A
ARG
53
n
53
ARG
53
A
ASP
54
n
54
ASP
54
A
CYS
55
n
55
CYS
55
A
SER
56
n
56
SER
56
A
VAL
57
n
57
VAL
57
A
ALA
58
n
58
ALA
58
A
GLY
59
n
59
GLY
59
A
TRP
60
n
60
TRP
60
A
LEU
61
n
61
LEU
61
A
LEU
62
n
62
LEU
62
A
GLY
63
n
63
GLY
63
A
ASN
64
n
64
ASN
64
A
PRO
65
n
65
PRO
65
A
MET
66
n
66
MET
66
A
CYS
67
n
67
CYS
67
A
ASP
68
n
68
ASP
68
A
GLU
69
n
69
GLU
69
A
PHE
70
n
70
PHE
70
A
ILE
71
n
71
ILE
71
A
ASN
72
n
72
ASN
72
A
VAL
73
n
73
VAL
73
A
PRO
74
n
74
PRO
74
A
GLU
75
n
75
GLU
75
A
TRP
76
n
76
TRP
76
A
SER
77
n
77
SER
77
A
TYR
78
n
78
TYR
78
A
ILE
79
n
79
ILE
79
A
VAL
80
n
80
VAL
80
A
GLU
81
n
81
GLU
81
A
LYS
82
n
82
LYS
82
A
ALA
83
n
83
ALA
83
A
ASN
84
n
84
ASN
84
A
PRO
85
n
85
PRO
85
A
VAL
86
n
86
VAL
86
A
ASN
87
n
87
ASN
87
A
ASP
88
n
88
ASP
88
A
LEU
89
n
89
LEU
89
A
CYS
90
n
90
CYS
90
A
TYR
91
n
91
TYR
91
A
PRO
92
n
92
PRO
92
A
GLY
93
n
93
GLY
93
A
ASP
94
n
94
ASP
94
A
PHE
95
n
95
PHE
95
A
ASN
96
n
96
ASN
96
A
ASP
97
n
97
ASP
97
A
TYR
98
n
98
TYR
98
A
GLU
99
n
99
GLU
99
A
GLU
100
n
100
GLU
100
A
LEU
101
n
101
LEU
101
A
LYS
102
n
102
LYS
102
A
HIS
103
n
103
HIS
103
A
LEU
104
n
104
LEU
104
A
LEU
105
n
105
LEU
105
A
SER
106
n
106
SER
106
A
ARG
107
n
107
ARG
107
A
ILE
108
n
108
ILE
108
A
ASN
109
n
109
ASN
109
A
HIS
110
n
110
HIS
110
A
PHE
111
n
111
PHE
111
A
GLU
112
n
112
GLU
112
A
LYS
113
n
113
LYS
113
A
ILE
114
n
114
ILE
114
A
GLN
115
n
115
GLN
115
A
ILE
116
n
116
ILE
116
A
ILE
117
n
117
ILE
117
A
PRO
118
n
118
PRO
118
A
LYS
119
n
119
LYS
119
A
SER
120
n
120
SER
120
A
SER
121
n
121
SER
121
A
TRP
122
n
122
TRP
122
A
SER
123
n
123
SER
123
A
SER
124
n
124
SER
124
A
HIS
125
n
125
HIS
125
A
GLU
126
n
126
GLU
126
A
ALA
127
n
127
ALA
127
A
SER
128
n
128
SER
128
A
LEU
129
n
129
LEU
129
A
GLY
130
n
130
GLY
130
A
VAL
131
n
131
VAL
131
A
SER
132
n
132
SER
132
A
SER
133
n
133
SER
133
A
ALA
134
n
134
ALA
134
A
CYS
135
n
135
CYS
135
A
PRO
136
n
136
PRO
136
A
TYR
137
n
137
TYR
137
A
GLN
138
n
138
GLN
138
A
GLY
139
n
139
GLY
139
A
LYS
140
n
140
LYS
140
A
SER
141
n
141
SER
141
A
SER
142
n
142
SER
142
A
PHE
143
n
143
PHE
143
A
PHE
144
n
144
PHE
144
A
ARG
145
n
145
ARG
145
A
ASN
146
n
146
ASN
146
A
VAL
147
n
147
VAL
147
A
VAL
148
n
148
VAL
148
A
TRP
149
n
149
TRP
149
A
LEU
150
n
150
LEU
150
A
ILE
151
n
151
ILE
151
A
LYS
152
n
152
LYS
152
A
LYS
153
n
153
LYS
153
A
ASN
154
n
154
ASN
154
A
SER
155
n
155
SER
155
A
THR
156
n
156
THR
156
A
TYR
157
n
157
TYR
157
A
PRO
158
n
158
PRO
158
A
THR
159
n
159
THR
159
A
ILE
160
n
160
ILE
160
A
LYS
161
n
161
LYS
161
A
ARG
162
n
162
ARG
162
A
SER
163
n
163
SER
163
A
TYR
164
n
164
TYR
164
A
ASN
165
n
165
ASN
165
A
ASN
166
n
166
ASN
166
A
THR
167
n
167
THR
167
A
ASN
168
n
168
ASN
168
A
GLN
169
n
169
GLN
169
A
GLU
170
n
170
GLU
170
A
ASP
171
n
171
ASP
171
A
LEU
172
n
172
LEU
172
A
LEU
173
n
173
LEU
173
A
VAL
174
n
174
VAL
174
A
LEU
175
n
175
LEU
175
A
TRP
176
n
176
TRP
176
A
GLY
177
n
177
GLY
177
A
ILE
178
n
178
ILE
178
A
HIS
179
n
179
HIS
179
A
HIS
180
n
180
HIS
180
A
PRO
181
n
181
PRO
181
A
ASN
182
n
182
ASN
182
A
ASP
183
n
183
ASP
183
A
ALA
184
n
184
ALA
184
A
ALA
185
n
185
ALA
185
A
GLU
186
n
186
GLU
186
A
GLN
187
n
187
GLN
187
A
THR
188
n
188
THR
188
A
LYS
189
n
189
LYS
189
A
LEU
190
n
190
LEU
190
A
TYR
191
n
191
TYR
191
A
GLN
192
n
192
GLN
192
A
ASN
193
n
193
ASN
193
A
PRO
194
n
194
PRO
194
A
THR
195
n
195
THR
195
A
THR
196
n
196
THR
196
A
TYR
197
n
197
TYR
197
A
ILE
198
n
198
ILE
198
A
SER
199
n
199
SER
199
A
VAL
200
n
200
VAL
200
A
GLY
201
n
201
GLY
201
A
THR
202
n
202
THR
202
A
SER
203
n
203
SER
203
A
THR
204
n
204
THR
204
A
LEU
205
n
205
LEU
205
A
ASN
206
n
206
ASN
206
A
GLN
207
n
207
GLN
207
A
ARG
208
n
208
ARG
208
A
LEU
209
n
209
LEU
209
A
VAL
210
n
210
VAL
210
A
PRO
211
n
211
PRO
211
A
ARG
212
n
212
ARG
212
A
ILE
213
n
213
ILE
213
A
ALA
214
n
214
ALA
214
A
THR
215
n
215
THR
215
A
ARG
216
n
216
ARG
216
A
SER
217
n
217
SER
217
A
LYS
218
n
218
LYS
218
A
VAL
219
n
219
VAL
219
A
ASN
220
n
220
ASN
220
A
GLY
221
n
221
GLY
221
A
GLN
222
n
222
GLN
222
A
SER
223
n
223
SER
223
A
GLY
224
n
224
GLY
224
A
ARG
225
n
225
ARG
225
A
MET
226
n
226
MET
226
A
GLU
227
n
227
GLU
227
A
PHE
228
n
228
PHE
228
A
PHE
229
n
229
PHE
229
A
TRP
230
n
230
TRP
230
A
THR
231
n
231
THR
231
A
ILE
232
n
232
ILE
232
A
LEU
233
n
233
LEU
233
A
LYS
234
n
234
LYS
234
A
PRO
235
n
235
PRO
235
A
ASN
236
n
236
ASN
236
A
ASP
237
n
237
ASP
237
A
ALA
238
n
238
ALA
238
A
ILE
239
n
239
ILE
239
A
ASN
240
n
240
ASN
240
A
PHE
241
n
241
PHE
241
A
GLU
242
n
242
GLU
242
A
SER
243
n
243
SER
243
A
ASN
244
n
244
ASN
244
A
GLY
245
n
245
GLY
245
A
ASN
246
n
246
ASN
246
A
PHE
247
n
247
PHE
247
A
ILE
248
n
248
ILE
248
A
ALA
249
n
249
ALA
249
A
PRO
250
n
250
PRO
250
A
GLU
251
n
251
GLU
251
A
TYR
252
n
252
TYR
252
A
ALA
253
n
253
ALA
253
A
TYR
254
n
254
TYR
254
A
LYS
255
n
255
LYS
255
A
ILE
256
n
256
ILE
256
A
VAL
257
n
257
VAL
257
A
LYS
258
n
258
LYS
258
A
LYS
259
n
259
LYS
259
A
GLY
260
n
260
GLY
260
A
ASP
261
n
261
ASP
261
A
SER
262
n
262
SER
262
A
THR
263
n
263
THR
263
A
ILE
264
n
264
ILE
264
A
MET
265
n
265
MET
265
A
LYS
266
n
266
LYS
266
A
SER
267
n
267
SER
267
A
GLU
268
n
268
GLU
268
A
LEU
269
n
269
LEU
269
A
GLU
270
n
270
GLU
270
A
TYR
271
n
271
TYR
271
A
GLY
272
n
272
GLY
272
A
ASN
273
n
273
ASN
273
A
CYS
274
n
274
CYS
274
A
ASN
275
n
275
ASN
275
A
THR
276
n
276
THR
276
A
LYS
277
n
277
LYS
277
A
CYS
278
n
278
CYS
278
A
GLN
279
n
279
GLN
279
A
THR
280
n
280
THR
280
A
PRO
281
n
281
PRO
281
A
MET
282
n
282
MET
282
A
GLY
283
n
283
GLY
283
A
ALA
284
n
284
ALA
284
A
ILE
285
n
285
ILE
285
A
ASN
286
n
286
ASN
286
A
SER
287
n
287
SER
287
A
SER
288
n
288
SER
288
A
MET
289
n
289
MET
289
A
PRO
290
n
290
PRO
290
A
PHE
291
n
291
PHE
291
A
HIS
292
n
292
HIS
292
A
ASN
293
n
293
ASN
293
A
ILE
294
n
294
ILE
294
A
HIS
295
n
295
HIS
295
A
PRO
296
n
296
PRO
296
A
LEU
297
n
297
LEU
297
A
THR
298
n
298
THR
298
A
ILE
299
n
299
ILE
299
A
GLY
300
n
300
GLY
300
A
GLU
301
n
301
GLU
301
A
CYS
302
n
302
CYS
302
A
PRO
303
n
303
PRO
303
A
LYS
304
n
304
LYS
304
A
TYR
305
n
305
TYR
305
A
VAL
306
n
306
VAL
306
A
LYS
307
n
307
LYS
307
A
SER
308
n
308
SER
308
A
ASN
309
n
309
ASN
309
A
ARG
310
n
310
ARG
310
A
LEU
311
n
311
LEU
311
A
VAL
312
n
312
VAL
312
A
LEU
313
n
313
LEU
313
A
ALA
314
n
314
ALA
314
A
THR
315
n
315
THR
315
A
GLY
316
n
316
GLY
316
A
LEU
317
n
317
LEU
317
A
ARG
318
n
318
ARG
318
A
ASN
319
n
319
ASN
319
A
SER
320
n
320
SER
320
A
PRO
321
n
321
PRO
321
A
n
322
322
A
n
323
323
A
n
324
324
A
n
325
325
A
n
326
326
A
GLY
1
n
1
GLY
1
B
LEU
2
n
2
LEU
2
B
PHE
3
n
3
PHE
3
B
GLY
4
n
4
GLY
4
B
ALA
5
n
5
ALA
5
B
ILE
6
n
6
ILE
6
B
ALA
7
n
7
ALA
7
B
GLY
8
n
8
GLY
8
B
PHE
9
n
9
PHE
9
B
ILE
10
n
10
ILE
10
B
GLU
11
n
11
GLU
11
B
GLY
12
n
12
GLY
12
B
GLY
13
n
13
GLY
13
B
TRP
14
n
14
TRP
14
B
GLN
15
n
15
GLN
15
B
GLY
16
n
16
GLY
16
B
MET
17
n
17
MET
17
B
VAL
18
n
18
VAL
18
B
ASP
19
n
19
ASP
19
B
GLY
20
n
20
GLY
20
B
TRP
21
n
21
TRP
21
B
TYR
22
n
22
TYR
22
B
GLY
23
n
23
GLY
23
B
TYR
24
n
24
TYR
24
B
HIS
25
n
25
HIS
25
B
HIS
26
n
26
HIS
26
B
SER
27
n
27
SER
27
B
ASN
28
n
28
ASN
28
B
GLU
29
n
29
GLU
29
B
GLN
30
n
30
GLN
30
B
GLY
31
n
31
GLY
31
B
SER
32
n
32
SER
32
B
GLY
33
n
33
GLY
33
B
TYR
34
n
34
TYR
34
B
ALA
35
n
35
ALA
35
B
ALA
36
n
36
ALA
36
B
ASP
37
n
37
ASP
37
B
LYS
38
n
38
LYS
38
B
GLU
39
n
39
GLU
39
B
SER
40
n
40
SER
40
B
THR
41
n
41
THR
41
B
GLN
42
n
42
GLN
42
B
LYS
43
n
43
LYS
43
B
ALA
44
n
44
ALA
44
B
ILE
45
n
45
ILE
45
B
ASP
46
n
46
ASP
46
B
GLY
47
n
47
GLY
47
B
VAL
48
n
48
VAL
48
B
THR
49
n
49
THR
49
B
ASN
50
n
50
ASN
50
B
LYS
51
n
51
LYS
51
B
VAL
52
n
52
VAL
52
B
ASN
53
n
53
ASN
53
B
SER
54
n
54
SER
54
B
ILE
55
n
55
ILE
55
B
ILE
56
n
56
ILE
56
B
ASP
57
n
57
ASP
57
B
LYS
58
n
58
LYS
58
B
MET
59
n
59
MET
59
B
ASN
60
n
60
ASN
60
B
THR
61
n
61
THR
61
B
GLN
62
n
62
GLN
62
B
PHE
63
n
63
PHE
63
B
GLU
64
n
64
GLU
64
B
ALA
65
n
65
ALA
65
B
VAL
66
n
66
VAL
66
B
GLY
67
n
67
GLY
67
B
ARG
68
n
68
ARG
68
B
GLU
69
n
69
GLU
69
B
PHE
70
n
70
PHE
70
B
ASN
71
n
71
ASN
71
B
ASN
72
n
72
ASN
72
B
LEU
73
n
73
LEU
73
B
GLU
74
n
74
GLU
74
B
ARG
75
n
75
ARG
75
B
ARG
76
n
76
ARG
76
B
ILE
77
n
77
ILE
77
B
GLU
78
n
78
GLU
78
B
ASN
79
n
79
ASN
79
B
LEU
80
n
80
LEU
80
B
ASN
81
n
81
ASN
81
B
LYS
82
n
82
LYS
82
B
LYS
83
n
83
LYS
83
B
MET
84
n
84
MET
84
B
GLU
85
n
85
GLU
85
B
ASP
86
n
86
ASP
86
B
GLY
87
n
87
GLY
87
B
PHE
88
n
88
PHE
88
B
LEU
89
n
89
LEU
89
B
ASP
90
n
90
ASP
90
B
VAL
91
n
91
VAL
91
B
TRP
92
n
92
TRP
92
B
THR
93
n
93
THR
93
B
TYR
94
n
94
TYR
94
B
ASN
95
n
95
ASN
95
B
ALA
96
n
96
ALA
96
B
GLU
97
n
97
GLU
97
B
LEU
98
n
98
LEU
98
B
LEU
99
n
99
LEU
99
B
VAL
100
n
100
VAL
100
B
LEU
101
n
101
LEU
101
B
MET
102
n
102
MET
102
B
GLU
103
n
103
GLU
103
B
ASN
104
n
104
ASN
104
B
GLU
105
n
105
GLU
105
B
ARG
106
n
106
ARG
106
B
THR
107
n
107
THR
107
B
LEU
108
n
108
LEU
108
B
ASP
109
n
109
ASP
109
B
PHE
110
n
110
PHE
110
B
HIS
111
n
111
HIS
111
B
ASP
112
n
112
ASP
112
B
SER
113
n
113
SER
113
B
ASN
114
n
114
ASN
114
B
VAL
115
n
115
VAL
115
B
LYS
116
n
116
LYS
116
B
ASN
117
n
117
ASN
117
B
LEU
118
n
118
LEU
118
B
TYR
119
n
119
TYR
119
B
ASP
120
n
120
ASP
120
B
LYS
121
n
121
LYS
121
B
VAL
122
n
122
VAL
122
B
ARG
123
n
123
ARG
123
B
LEU
124
n
124
LEU
124
B
GLN
125
n
125
GLN
125
B
LEU
126
n
126
LEU
126
B
ARG
127
n
127
ARG
127
B
ASP
128
n
128
ASP
128
B
ASN
129
n
129
ASN
129
B
ALA
130
n
130
ALA
130
B
LYS
131
n
131
LYS
131
B
GLU
132
n
132
GLU
132
B
LEU
133
n
133
LEU
133
B
GLY
134
n
134
GLY
134
B
ASN
135
n
135
ASN
135
B
GLY
136
n
136
GLY
136
B
CYS
137
n
137
CYS
137
B
PHE
138
n
138
PHE
138
B
GLU
139
n
139
GLU
139
B
PHE
140
n
140
PHE
140
B
TYR
141
n
141
TYR
141
B
HIS
142
n
142
HIS
142
B
LYS
143
n
143
LYS
143
B
CYS
144
n
144
CYS
144
B
ASP
145
n
145
ASP
145
B
ASN
146
n
146
ASN
146
B
GLU
147
n
147
GLU
147
B
CYS
148
n
148
CYS
148
B
MET
149
n
149
MET
149
B
GLU
150
n
150
GLU
150
B
SER
151
n
151
SER
151
B
VAL
152
n
152
VAL
152
B
ARG
153
n
153
ARG
153
B
ASN
154
n
154
ASN
154
B
GLY
155
n
155
GLY
155
B
THR
156
n
156
THR
156
B
TYR
157
n
157
TYR
157
B
ASP
158
n
158
ASP
158
B
TYR
159
n
159
TYR
159
B
PRO
160
n
160
PRO
160
B
GLN
161
n
161
GLN
161
B
TYR
162
n
162
TYR
162
B
n
163
163
B
n
164
164
B
n
165
165
B
n
166
166
B
0.3295
0.0416
0.0424
0.2096
0.3007
4.5523
-0.0197
-0.1751
0.0662
0.1819
-0.0428
-0.1846
-0.3640
1.2153
0.0625
0.3523
-0.2065
-0.1174
0.5294
0.0458
0.3862
refined
-29.4250
35.8230
56.1846
X-RAY DIFFRACTION
2.4582
-0.4432
-0.4803
2.1856
0.5561
1.8952
-0.4523
-0.5801
0.1394
0.5213
0.2305
-0.1246
-0.4025
0.5767
0.2217
0.7602
-0.1877
-0.1802
0.7496
-0.0284
0.2893
refined
-34.8932
41.3834
91.3924
X-RAY DIFFRACTION
0.4246
0.2873
1.3939
0.9261
-0.0854
12.1588
0.1225
-0.1005
0.0704
0.2940
-0.0337
-0.3068
-0.3494
0.5023
-0.0888
0.2337
-0.1129
-0.0855
0.4413
-0.0069
0.3881
refined
-30.6045
35.1777
48.0547
X-RAY DIFFRACTION
4.2742
1.3166
-3.7530
2.4325
-0.5055
7.5737
-0.2636
-0.1322
0.2554
-0.1066
0.0499
-0.0728
-0.7002
0.9051
0.2136
0.2246
-0.1650
-0.1091
0.2730
0.0961
0.2946
refined
-36.3729
37.7606
16.3815
X-RAY DIFFRACTION
3.6461
0.4752
-0.9868
5.6449
-6.4150
21.2323
-0.1575
0.1968
0.0715
0.0041
-0.2049
-0.3905
-0.2979
1.2787
0.3624
0.1628
-0.0014
-0.0131
0.2122
0.0279
0.2860
refined
-43.7693
28.2210
64.5760
X-RAY DIFFRACTION
1.7975
0.8015
-2.5762
1.5341
-1.2277
15.6874
-0.3082
0.2126
-0.0129
-0.1584
-0.0991
-0.0831
0.1945
-0.4256
0.4073
0.0580
-0.0300
-0.0049
0.0606
0.0233
0.2410
refined
-43.0838
32.0345
18.3750
X-RAY DIFFRACTION
20.2040
-2.5997
-4.3986
0.5242
0.2190
8.4604
0.0593
0.8767
0.2296
-0.1879
0.1512
0.3480
-2.0763
-0.2336
-0.2105
1.0285
-0.4561
-0.5106
0.5893
0.4715
0.8424
refined
-38.4636
44.4360
-5.4738
X-RAY DIFFRACTION
A
1
A
105
X-RAY DIFFRACTION
1
A
106
A
262
X-RAY DIFFRACTION
2
A
263
A
321
X-RAY DIFFRACTION
3
B
1
B
60
X-RAY DIFFRACTION
4
B
61
B
84
X-RAY DIFFRACTION
5
B
85
B
141
X-RAY DIFFRACTION
6
B
142
B
163
X-RAY DIFFRACTION
7
author_and_software_defined_assembly
PISA
6
hexameric
35310
-73.3
61600
A
ASN
23
GLYCOSYLATION SITE
A
ASN
23
ASN
A
ASN
165
GLYCOSYLATION SITE
A
ASN
165
ASN
B
ASN
154
GLYCOSYLATION SITE
B
ASN
154
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_565
-y,x-y+1,z
crystal symmetry operation
-50.7015000000
87.8175740200
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_455
-x+y-1,-x,z
crystal symmetry operation
-101.4030000000
0.0000000000
0.0000000000
B
N
ALA
35
B
N
ALA
35
B
O
TYR
24
B
O
TYR
24
B
N
SER
27
B
N
SER
27
A
O
GLN
2
A
O
GLN
2
A
N
ILE
3
A
N
ILE
3
B
O
PHE
138
B
O
PHE
138
B
N
GLU
139
B
N
GLU
139
B
O
LYS
131
B
O
LYS
131
A
N
VAL
16
A
N
VAL
16
A
O
VAL
24
A
O
VAL
24
A
N
GLN
30
A
N
GLN
30
A
O
LEU
313
A
O
LEU
313
A
N
GLU
34
A
N
GLU
34
A
O
PHE
291
A
O
PHE
291
A
N
HIS
292
A
N
HIS
292
A
O
LYS
304
A
O
LYS
304
A
O
LEU
41
A
O
LEU
41
A
N
GLY
272
A
N
GLY
272
A
N
LEU
52
A
N
LEU
52
A
O
VAL
80
A
O
VAL
80
A
N
GLU
81
A
N
GLU
81
A
O
MET
265
A
O
MET
265
A
N
ASP
94
A
N
ASP
94
A
O
MET
226
A
O
MET
226
A
N
LEU
233
A
N
LEU
233
A
O
LEU
172
A
O
LEU
172
A
N
GLY
177
A
N
GLY
177
A
O
ILE
248
A
O
ILE
248
A
N
ALA
249
A
N
ALA
249
A
O
VAL
148
A
O
VAL
148
A
N
ASP
94
A
N
ASP
94
A
O
MET
226
A
O
MET
226
A
N
LEU
233
A
N
LEU
233
A
O
LEU
172
A
O
LEU
172
A
N
LEU
173
A
N
LEU
173
A
O
TYR
254
A
O
TYR
254
A
O
LYS
258
A
O
LYS
258
A
N
ASN
109
A
N
ASN
109
A
N
TYR
137
A
N
TYR
137
A
O
LYS
140
A
O
LYS
140
A
N
TYR
164
A
N
TYR
164
A
O
ILE
239
A
O
ILE
239
A
N
GLU
242
A
N
GLU
242
A
O
SER
199
A
O
SER
199
A
N
VAL
200
A
N
VAL
200
A
O
GLN
207
A
O
GLN
207
A
N
GLY
283
A
N
GLY
283
A
O
THR
280
A
O
THR
280
A
N
GLN
279
A
N
GLN
279
A
O
ILE
299
A
O
ILE
299
1
B
HOH
2018
I
HOH
1
B
HOH
2034
I
HOH
1
A
GLN
322
A
GLN
322
1
Y
1
A
ARG
323
A
ARG
323
1
Y
1
A
GLU
324
A
GLU
324
1
Y
1
A
THR
325
A
THR
325
1
Y
1
A
ARG
326
A
ARG
326
1
Y
1
B
SER
163
B
SER
163
1
Y
1
B
GLU
164
B
GLU
164
1
Y
1
B
GLU
165
B
GLU
165
1
Y
1
B
ALA
166
B
ALA
166
1
Y
1
F
C1
NAG
1
WRONG HAND
1
A
A
O
NE2
SER
GLN
155
192
1.10
1
A
A
O
CD
SER
GLN
155
192
1.83
1
B
B
OE1
NH1
GLU
ARG
150
153
2.08
1
A
A
OE2
OE2
GLU
GLU
170
170
2.07
1_555
11_565
1
A
ARG
53
62.85
-129.64
1
A
ASN
72
39.76
42.25
1
A
ASP
88
-104.78
-129.56
1
A
LEU
89
-68.79
94.84
1
A
SER
142
-129.38
-159.30
1
A
PHE
144
-38.54
114.19
1
A
GLN
192
66.63
-63.65
1
A
THR
202
-128.73
-158.71
1
A
GLU
251
-104.86
-62.77
1
A
HIS
295
-173.68
137.81
1
B
ALA
5
-91.43
-65.24
1
B
ARG
127
57.20
-132.87
75.629
2.32
2.32
0.00
2.32
0.00
-7.53
0.946
0.920
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.U VALUES WITH TLS ADDED. STRONG ELECTRON DENSITY FEATURE FOR THE NAG MOIETY OF AVIAN RECEPTOR IS OBSERVED BUT NOT VERY WELL DEFINED AND SO THERE MAY BE OTHER CONFORMATIONS PRESENT AS WELL AS THE ONE WE HAVE BUILT.
0.24806
0.20207
0.20433
2.68
40.94
1307
24350
5.1
99.90
20.203
0.215
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.401
0.279
0.80
0.80
1.20
MAXIMUM LIKELIHOOD
MASK
2.68
40.94
133
4137
145
0
3859
0.007
0.019
4107
0.001
0.020
3765
1.143
1.979
5579
0.716
3.003
8652
5.653
5.000
481
39.407
25.174
201
17.655
15.000
677
14.030
15.000
17
0.064
0.200
612
0.004
0.020
4616
0.001
0.020
945
0.991
3.212
1930
0.990
3.212
1929
1.670
4.817
2409
1.836
3.792
2176
0.302
0.285
2.750
93
1760
20
99.73
2.68
40.90
4BGY
25658
3.1
0.10
1
15.30
9.0
100.0
0.62
2.68
2.82
3.10
1
8.0
99.8
refinement
REFMAC
5.7.0032
data reduction
MOSFLM
data scaling
SCALA
phasing
PHASER
HEMAGGLUTININ
H5 (VN1194) Influenza Virus Haemagglutinin in Complex with Avian Receptor Analogue 3'-SLN
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
3
N
N
5
N
N
6
N
N
6
N
N
A
SER
56
A
SER
56
HELX_P
A
GLY
63
A
GLY
63
1
1
8
A
ASN
64
A
ASN
64
HELX_P
A
ILE
71
A
ILE
71
5
2
8
A
ASP
97
A
ASP
97
HELX_P
A
SER
106
A
SER
106
1
3
10
A
ASP
183
A
ASP
183
HELX_P
A
GLN
192
A
GLN
192
1
4
10
B
ASP
37
B
ASP
37
HELX_P
B
THR
61
B
THR
61
1
5
25
B
GLU
74
B
GLU
74
HELX_P
B
ARG
127
B
ARG
127
1
6
54
B
ASP
145
B
ASP
145
HELX_P
B
GLY
155
B
GLY
155
1
7
11
disulf
2.072
A
CYS
4
A
SG
CYS
4
1_555
B
CYS
137
B
SG
CYS
137
1_555
disulf
2.008
A
CYS
42
A
SG
CYS
42
1_555
A
CYS
274
A
SG
CYS
274
1_555
disulf
2.034
A
CYS
55
A
SG
CYS
55
1_555
A
CYS
67
A
SG
CYS
67
1_555
disulf
2.034
A
CYS
90
A
SG
CYS
90
1_555
A
CYS
135
A
SG
CYS
135
1_555
disulf
2.047
A
CYS
278
A
SG
CYS
278
1_555
A
CYS
302
A
SG
CYS
302
1_555
disulf
2.024
B
CYS
144
B
SG
CYS
144
1_555
B
CYS
148
B
SG
CYS
148
1_555
covale
1.444
one
N-Glycosylation
A
ASN
23
A
ND2
ASN
23
1_555
C
NAG
1
C
C1
NAG
1_555
covale
1.442
one
N-Glycosylation
A
ASN
165
A
ND2
ASN
165
1_555
D
NAG
1
D
C1
NAG
1_555
covale
1.436
one
N-Glycosylation
B
ASN
154
B
ND2
ASN
154
1_555
F
NAG
1
F
C1
NAG
1_555
covale
1.440
both
C
NAG
1
C
O4
NAG
1_555
C
NAG
2
C
C1
NAG
1_555
covale
1.433
both
D
NAG
1
D
O4
NAG
1_555
D
NAG
2
D
C1
NAG
1_555
covale
1.418
both
E
NAG
1
E
O4
NAG
1_555
E
GAL
2
E
C1
GAL
1_555
covale
1.416
both
E
GAL
2
E
O3
GAL
1_555
E
SIA
3
E
C2
SIA
1_555
covale
1.441
both
F
NAG
1
F
O4
NAG
1_555
F
NAG
2
F
C1
NAG
1_555
VIRAL PROTEIN
VIRAL PROTEIN, N-GLYCOSYLATION, VIRUS RECEPTOR, BIRD FLU
Q6DQ34_9INFA
UNP
1
Q6DQ34
Q6DQ34_9INFA
UNP
2
Q6DQ34
17
342
4BGY
1
326
Q6DQ34
A
1
1
326
347
512
4BGY
1
166
Q6DQ34
B
2
1
166
1
ARG
conflict
THR
325
4BGY
A
Q6DQ34
UNP
341
325
5
2
2
3
2
3
5
5
2
4
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
B
GLY
31
B
GLY
31
B
ALA
36
B
ALA
36
B
TYR
22
B
TYR
22
B
ASN
28
B
ASN
28
A
GLN
2
A
GLN
2
A
TYR
7
A
TYR
7
B
CYS
137
B
CYS
137
B
PHE
140
B
PHE
140
B
ALA
130
B
ALA
130
B
GLU
132
B
GLU
132
A
GLN
15
A
GLN
15
A
VAL
16
A
VAL
16
A
VAL
24
A
VAL
24
A
THR
25
A
THR
25
A
ALA
29
A
ALA
29
A
ASP
31
A
ASP
31
A
VAL
312
A
VAL
312
A
ALA
314
A
ALA
314
A
LEU
33
A
LEU
33
A
GLU
34
A
GLU
34
A
PHE
291
A
PHE
291
A
HIS
292
A
HIS
292
A
LYS
304
A
LYS
304
A
TYR
305
A
TYR
305
A
LEU
41
A
LEU
41
A
LEU
44
A
LEU
44
A
TYR
271
A
TYR
271
A
THR
276
A
THR
276
A
LEU
50
A
LEU
50
A
ARG
53
A
ARG
53
A
ILE
79
A
ILE
79
A
GLU
81
A
GLU
81
A
ILE
264
A
ILE
264
A
LYS
266
A
LYS
266
A
GLY
93
A
GLY
93
A
PHE
95
A
PHE
95
A
ARG
225
A
ARG
225
A
LEU
233
A
LEU
233
A
LEU
172
A
LEU
172
A
HIS
180
A
HIS
180
A
PHE
247
A
PHE
247
A
PRO
250
A
PRO
250
A
VAL
147
A
VAL
147
A
TRP
149
A
TRP
149
A
GLY
93
A
GLY
93
A
PHE
95
A
PHE
95
A
ARG
225
A
ARG
225
A
LEU
233
A
LEU
233
A
LEU
172
A
LEU
172
A
HIS
180
A
HIS
180
A
TYR
252
A
TYR
252
A
LYS
259
A
LYS
259
A
ILE
108
A
ILE
108
A
GLN
115
A
GLN
115
A
SER
132
A
SER
132
A
TYR
137
A
TYR
137
A
LYS
140
A
LYS
140
A
SER
142
A
SER
142
A
ILE
160
A
ILE
160
A
ASN
165
A
ASN
165
A
ALA
238
A
ALA
238
A
SER
243
A
SER
243
A
ILE
198
A
ILE
198
A
GLY
201
A
GLY
201
A
ASN
206
A
ASN
206
A
LEU
209
A
LEU
209
A
GLY
283
A
GLY
283
A
ALA
284
A
ALA
284
A
CYS
278
A
CYS
278
A
THR
280
A
THR
280
A
ILE
299
A
ILE
299
A
GLY
300
A
GLY
300
155
H 3 2