0.022705
0.000000
0.000000
0.000000
0.013994
0.000000
0.000000
0.000000
0.005808
0.000000
0.000000
0.000000
Zhang, C.
Srinivasan, Y.
Arlow, D.H.
Fung, J.J.
Palmer, D.
Zheng, Y.
Green, H.F.
Pandey, A.
Dror, R.O.
Shaw, D.E.
Weis, W.I.
Coughlin, S.R.
Kobilka, B.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
44.044
71.460
172.187
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C21 H40 O4
356.540
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
1-Oleoyl-R-glycerol
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C29 H33 F N2 O4
492.582
ethyl [(1R,3aR,4aR,6R,8aR,9S,9aS)-9-{(E)-2-[5-(3-fluorophenyl)pyridin-2-yl]ethenyl}-1-methyl-3-oxododecahydronaphtho[2,3-c]fur an-6-yl]carbamate
vorapaxar
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
NA
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
C
N
269
N
C
N
270
N
C
N
271
N
C
N
272
R
C
N
273
N
O
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
N
328
N
O
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
N
345
N
C
N
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
N
N
358
S
C
N
359
N
C
N
360
N
O
N
361
N
C
N
362
N
O
N
363
N
O
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
R
C
N
376
N
O
N
377
N
C
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
N
N
389
S
C
N
390
N
C
N
391
N
O
N
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
N
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
N
426
N
O
N
427
N
O
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
N
444
N
C
N
445
N
C
N
446
N
O
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
C
N
459
N
C
N
460
N
O
N
461
N
C
N
462
N
O
N
463
N
N
N
464
R
C
N
465
N
C
N
466
N
C
N
467
N
C
N
468
R
C
N
469
R
C
N
470
N
C
N
471
R
C
N
472
N
C
N
473
N
O
N
474
N
O
N
475
R
C
N
476
N
C
N
477
S
C
N
478
S
C
N
479
N
C
N
480
N
C
Y
481
N
C
Y
482
N
C
Y
483
N
C
Y
484
N
N
Y
485
N
C
Y
486
N
C
Y
487
N
C
Y
488
N
C
Y
489
N
C
N
490
N
F
Y
491
N
C
Y
492
N
C
Y
493
N
C
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
Z
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
Y
312
N
doub
Y
313
N
sing
Y
314
N
sing
N
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
doub
N
319
N
sing
Y
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
Y
381
N
doub
Y
382
N
sing
Y
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
Y
409
N
doub
Y
410
N
sing
Y
411
N
sing
N
412
N
sing
Y
413
N
doub
N
414
N
sing
Y
415
N
doub
N
416
N
sing
Y
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
doub
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
Y
440
N
doub
Y
441
N
sing
Y
442
N
sing
Y
443
N
doub
N
444
N
sing
Y
445
N
doub
Y
446
N
sing
N
447
N
sing
Y
448
N
doub
Y
449
N
sing
Y
450
N
sing
Y
451
N
doub
Y
452
N
doub
N
453
N
sing
Y
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
E
doub
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
doub
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
UK
Nature
NATUAS
0006
0028-0836
492
387
392
10.1038/nature11701
23222541
High-resolution crystal structure of human protease-activated receptor 1
2012
10.2210/pdb3vw7/pdb
pdb_00003vw7
93
1
CCD
2012-02-18
MARMOSAIC 300 mm CCD
Double crystal cryo-cooled Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.033
1.0
23-ID-B
APS
1.033
SYNCHROTRON
APS BEAMLINE 23-ID-B
Chimera protein of residues 86-395 form Proteinase-activated receptor 1 (P25116, PAR1_HUMAN), Lyzosyme from Enterobacteria phage T4 (P00720, LYS_BPT4) and residues 303-395 from Proteinase-activated receptor 1 (P25116, PAR1_HUMAN)
54338.980
Proteinase-activated receptor 1, Lysozyme
3.2.1.17
N250G, N259S, D1020N, C1054T, C1097A
1
man
polymer
492.582
ethyl [(1R,3aR,4aR,6R,8aR,9S,9aS)-9-{(E)-2-[5-(3-fluorophenyl)pyridin-2-yl]ethenyl}-1-methyl-3-oxododecahydronaphtho[2,3-c]fur an-6-yl]carbamate
1
syn
non-polymer
356.540
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
9
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
22.990
SODIUM ION
1
syn
non-polymer
18.015
water
91
nat
water
PAR-1, Coagulation factor II receptor, Thrombin receptor, Endolysin, Lysis protein, Muramidase
no
no
SGTAFISEDASGYLTSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYY
FSGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQ
TIQVPGLGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTE
GYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINM
VFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFI
ICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKESSDPSCYHHHHHH
HHHH
SGTAFISEDASGYLTSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYY
FSGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQ
TIQVPGLGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTE
GYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINM
VFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFI
ICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKESSDPSCYHHHHHH
HHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
4
219
9606
Homo sapiens
7108
Spodoptera frugiperda
baculovirus
human
sample
220
379
10665
Enterobacteria phage T4
7108
Spodoptera frugiperda
baculovirus
human
sample
380
472
9606
Homo sapiens
7108
Spodoptera frugiperda
baculovirus
18
2.49
50.67
0.1-0.2M sodium chloride, 100mM sodium phosphate pH 6.0-6.5, 25%-35% PEG 300, Lipidic cubic phase (in meso phase), temperature 293K
6.0-6.5
293
entity_src_gen
pdbx_unobs_or_zero_occ_atoms
software
chem_comp
chem_comp_atom
chem_comp_bond
database_2
entity
pdbx_entity_nonpoly
pdbx_initial_refinement_model
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Advisory
Source and taxonomy
Refinement description
Advisory
Data collection
Database references
Derived calculations
Refinement description
Structure summary
1
0
2012-12-12
1
1
2013-08-14
1
2
2017-08-16
1
3
2017-11-22
1
4
2023-11-08
_software.classification
_software.contact_author
_software.contact_author_email
_software.date
_software.language
_software.location
_software.name
_software.type
_software.version
_chem_comp.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBJ
Y
PDBJ
2012-08-07
REL
REL
VPX
ethyl [(1R,3aR,4aR,6R,8aR,9S,9aS)-9-{(E)-2-[5-(3-fluorophenyl)pyridin-2-yl]ethenyl}-1-methyl-3-oxododecahydronaphtho[2,3-c]fur an-6-yl]carbamate
OLC
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
CL
CHLORIDE ION
NA
SODIUM ION
HOH
water
3ODU
PDB code 3ODU
PDB
experimental model
VPX
2001
2
VPX
VPX
2001
A
MOG
4001
3
OLC
OLC
2002
A
MOG
4002
3
OLC
OLC
2003
A
MOG
4003
3
OLC
OLC
2004
A
MOG
4004
3
OLC
OLC
2005
A
MOG
4005
3
OLC
OLC
2006
A
MOG
4006
3
OLC
OLC
2007
A
MOG
4007
3
OLC
OLC
2008
A
MOG
4008
3
OLC
OLC
2009
A
MOG
4009
3
OLC
OLC
2010
A
CL
5001
4
CL
CL
2011
A
NA
5002
5
NA
NA
2012
A
HOH
3001
6
HOH
HOH
3001
A
HOH
3003
6
HOH
HOH
3002
A
HOH
3004
6
HOH
HOH
3003
A
HOH
3005
6
HOH
HOH
3004
A
HOH
3006
6
HOH
HOH
3005
A
HOH
3007
6
HOH
HOH
3006
A
HOH
3008
6
HOH
HOH
3007
A
HOH
3009
6
HOH
HOH
3008
A
HOH
3010
6
HOH
HOH
3009
A
HOH
3011
6
HOH
HOH
3010
A
HOH
3012
6
HOH
HOH
3011
A
HOH
3013
6
HOH
HOH
3012
A
HOH
3018
6
HOH
HOH
3013
A
HOH
3020
6
HOH
HOH
3014
A
HOH
3021
6
HOH
HOH
3015
A
HOH
3022
6
HOH
HOH
3016
A
HOH
3023
6
HOH
HOH
3017
A
HOH
3025
6
HOH
HOH
3018
A
HOH
3026
6
HOH
HOH
3019
A
HOH
3027
6
HOH
HOH
3020
A
HOH
3028
6
HOH
HOH
3021
A
HOH
3030
6
HOH
HOH
3022
A
HOH
3031
6
HOH
HOH
3023
A
HOH
3033
6
HOH
HOH
3024
A
HOH
3034
6
HOH
HOH
3025
A
HOH
3040
6
HOH
HOH
3026
A
HOH
3043
6
HOH
HOH
3027
A
HOH
3048
6
HOH
HOH
3028
A
HOH
3049
6
HOH
HOH
3029
A
HOH
3050
6
HOH
HOH
3030
A
HOH
3051
6
HOH
HOH
3031
A
HOH
3052
6
HOH
HOH
3032
A
HOH
3053
6
HOH
HOH
3033
A
HOH
3054
6
HOH
HOH
3034
A
HOH
3055
6
HOH
HOH
3035
A
HOH
3056
6
HOH
HOH
3036
A
HOH
3058
6
HOH
HOH
3037
A
HOH
3059
6
HOH
HOH
3038
A
HOH
3060
6
HOH
HOH
3039
A
HOH
3061
6
HOH
HOH
3040
A
HOH
3064
6
HOH
HOH
3041
A
HOH
3065
6
HOH
HOH
3042
A
HOH
3067
6
HOH
HOH
3043
A
HOH
3068
6
HOH
HOH
3044
A
HOH
3069
6
HOH
HOH
3045
A
HOH
3070
6
HOH
HOH
3046
A
HOH
3071
6
HOH
HOH
3047
A
HOH
3072
6
HOH
HOH
3048
A
HOH
3073
6
HOH
HOH
3049
A
HOH
3076
6
HOH
HOH
3050
A
HOH
3078
6
HOH
HOH
3051
A
HOH
3079
6
HOH
HOH
3052
A
HOH
3081
6
HOH
HOH
3053
A
HOH
3082
6
HOH
HOH
3054
A
HOH
3083
6
HOH
HOH
3055
A
HOH
3084
6
HOH
HOH
3056
A
HOH
3085
6
HOH
HOH
3057
A
HOH
3086
6
HOH
HOH
3058
A
HOH
3087
6
HOH
HOH
3059
A
HOH
3088
6
HOH
HOH
3060
A
HOH
3089
6
HOH
HOH
3061
A
HOH
3090
6
HOH
HOH
3062
A
HOH
3091
6
HOH
HOH
3063
A
HOH
3092
6
HOH
HOH
3064
A
HOH
3101
6
HOH
HOH
3065
A
HOH
3103
6
HOH
HOH
3066
A
HOH
3104
6
HOH
HOH
3067
A
HOH
3105
6
HOH
HOH
3068
A
HOH
3106
6
HOH
HOH
3069
A
HOH
3108
6
HOH
HOH
3070
A
HOH
3109
6
HOH
HOH
3071
A
HOH
3110
6
HOH
HOH
3072
A
HOH
3111
6
HOH
HOH
3073
A
HOH
3112
6
HOH
HOH
3074
A
HOH
3114
6
HOH
HOH
3075
A
HOH
3115
6
HOH
HOH
3076
A
HOH
3116
6
HOH
HOH
3077
A
HOH
3117
6
HOH
HOH
3078
A
HOH
3118
6
HOH
HOH
3079
A
HOH
3119
6
HOH
HOH
3080
A
HOH
3120
6
HOH
HOH
3081
A
HOH
3121
6
HOH
HOH
3082
A
HOH
3122
6
HOH
HOH
3083
A
HOH
3123
6
HOH
HOH
3084
A
HOH
3124
6
HOH
HOH
3085
A
HOH
3125
6
HOH
HOH
3086
A
HOH
3126
6
HOH
HOH
3087
A
HOH
3127
6
HOH
HOH
3088
A
HOH
3128
6
HOH
HOH
3089
A
HOH
3129
6
HOH
HOH
3090
A
HOH
3130
6
HOH
HOH
3091
A
n
1
83
A
n
2
84
A
n
3
85
A
n
4
86
A
n
5
87
A
n
6
88
A
n
7
89
A
n
8
90
A
ASP
91
n
9
ASP
91
A
ALA
92
n
10
ALA
92
A
SER
93
n
11
SER
93
A
GLY
94
n
12
GLY
94
A
TYR
95
n
13
TYR
95
A
LEU
96
n
14
LEU
96
A
THR
97
n
15
THR
97
A
SER
98
n
16
SER
98
A
SER
99
n
17
SER
99
A
TRP
100
n
18
TRP
100
A
LEU
101
n
19
LEU
101
A
THR
102
n
20
THR
102
A
LEU
103
n
21
LEU
103
A
PHE
104
n
22
PHE
104
A
VAL
105
n
23
VAL
105
A
PRO
106
n
24
PRO
106
A
SER
107
n
25
SER
107
A
VAL
108
n
26
VAL
108
A
TYR
109
n
27
TYR
109
A
THR
110
n
28
THR
110
A
GLY
111
n
29
GLY
111
A
VAL
112
n
30
VAL
112
A
PHE
113
n
31
PHE
113
A
VAL
114
n
32
VAL
114
A
VAL
115
n
33
VAL
115
A
SER
116
n
34
SER
116
A
LEU
117
n
35
LEU
117
A
PRO
118
n
36
PRO
118
A
LEU
119
n
37
LEU
119
A
ASN
120
n
38
ASN
120
A
ILE
121
n
39
ILE
121
A
MET
122
n
40
MET
122
A
ALA
123
n
41
ALA
123
A
ILE
124
n
42
ILE
124
A
VAL
125
n
43
VAL
125
A
VAL
126
n
44
VAL
126
A
PHE
127
n
45
PHE
127
A
ILE
128
n
46
ILE
128
A
LEU
129
n
47
LEU
129
A
LYS
130
n
48
LYS
130
A
MET
131
n
49
MET
131
A
LYS
132
n
50
LYS
132
A
VAL
133
n
51
VAL
133
A
LYS
134
n
52
LYS
134
A
LYS
135
n
53
LYS
135
A
PRO
136
n
54
PRO
136
A
ALA
137
n
55
ALA
137
A
VAL
138
n
56
VAL
138
A
VAL
139
n
57
VAL
139
A
TYR
140
n
58
TYR
140
A
MET
141
n
59
MET
141
A
LEU
142
n
60
LEU
142
A
HIS
143
n
61
HIS
143
A
LEU
144
n
62
LEU
144
A
ALA
145
n
63
ALA
145
A
THR
146
n
64
THR
146
A
ALA
147
n
65
ALA
147
A
ASP
148
n
66
ASP
148
A
VAL
149
n
67
VAL
149
A
LEU
150
n
68
LEU
150
A
PHE
151
n
69
PHE
151
A
VAL
152
n
70
VAL
152
A
SER
153
n
71
SER
153
A
VAL
154
n
72
VAL
154
A
LEU
155
n
73
LEU
155
A
PRO
156
n
74
PRO
156
A
PHE
157
n
75
PHE
157
A
LYS
158
n
76
LYS
158
A
ILE
159
n
77
ILE
159
A
SER
160
n
78
SER
160
A
TYR
161
n
79
TYR
161
A
TYR
162
n
80
TYR
162
A
PHE
163
n
81
PHE
163
A
SER
164
n
82
SER
164
A
GLY
165
n
83
GLY
165
A
SER
166
n
84
SER
166
A
ASP
167
n
85
ASP
167
A
TRP
168
n
86
TRP
168
A
GLN
169
n
87
GLN
169
A
PHE
170
n
88
PHE
170
A
GLY
171
n
89
GLY
171
A
SER
172
n
90
SER
172
A
GLU
173
n
91
GLU
173
A
LEU
174
n
92
LEU
174
A
CYS
175
n
93
CYS
175
A
ARG
176
n
94
ARG
176
A
PHE
177
n
95
PHE
177
A
VAL
178
n
96
VAL
178
A
THR
179
n
97
THR
179
A
ALA
180
n
98
ALA
180
A
ALA
181
n
99
ALA
181
A
PHE
182
n
100
PHE
182
A
TYR
183
n
101
TYR
183
A
CYS
184
n
102
CYS
184
A
ASN
185
n
103
ASN
185
A
MET
186
n
104
MET
186
A
TYR
187
n
105
TYR
187
A
ALA
188
n
106
ALA
188
A
SER
189
n
107
SER
189
A
ILE
190
n
108
ILE
190
A
LEU
191
n
109
LEU
191
A
LEU
192
n
110
LEU
192
A
MET
193
n
111
MET
193
A
THR
194
n
112
THR
194
A
VAL
195
n
113
VAL
195
A
ILE
196
n
114
ILE
196
A
SER
197
n
115
SER
197
A
ILE
198
n
116
ILE
198
A
ASP
199
n
117
ASP
199
A
ARG
200
n
118
ARG
200
A
PHE
201
n
119
PHE
201
A
LEU
202
n
120
LEU
202
A
ALA
203
n
121
ALA
203
A
VAL
204
n
122
VAL
204
A
VAL
205
n
123
VAL
205
A
TYR
206
n
124
TYR
206
A
PRO
207
n
125
PRO
207
A
MET
208
n
126
MET
208
A
n
127
209
A
n
128
210
A
n
129
211
A
n
130
212
A
n
131
213
A
ARG
214
n
132
ARG
214
A
THR
215
n
133
THR
215
A
LEU
216
n
134
LEU
216
A
GLY
217
n
135
GLY
217
A
ARG
218
n
136
ARG
218
A
ALA
219
n
137
ALA
219
A
SER
220
n
138
SER
220
A
PHE
221
n
139
PHE
221
A
THR
222
n
140
THR
222
A
CYS
223
n
141
CYS
223
A
LEU
224
n
142
LEU
224
A
ALA
225
n
143
ALA
225
A
ILE
226
n
144
ILE
226
A
TRP
227
n
145
TRP
227
A
ALA
228
n
146
ALA
228
A
LEU
229
n
147
LEU
229
A
ALA
230
n
148
ALA
230
A
ILE
231
n
149
ILE
231
A
ALA
232
n
150
ALA
232
A
GLY
233
n
151
GLY
233
A
VAL
234
n
152
VAL
234
A
VAL
235
n
153
VAL
235
A
PRO
236
n
154
PRO
236
A
LEU
237
n
155
LEU
237
A
LEU
238
n
156
LEU
238
A
LEU
239
n
157
LEU
239
A
LYS
240
n
158
LYS
240
A
GLU
241
n
159
GLU
241
A
GLN
242
n
160
GLN
242
A
THR
243
n
161
THR
243
A
ILE
244
n
162
ILE
244
A
GLN
245
n
163
GLN
245
A
VAL
246
n
164
VAL
246
A
PRO
247
n
165
PRO
247
A
GLY
248
n
166
GLY
248
A
LEU
249
n
167
LEU
249
A
GLY
250
n
168
GLY
250
A
ILE
251
n
169
ILE
251
A
THR
252
n
170
THR
252
A
THR
253
n
171
THR
253
A
CYS
254
n
172
CYS
254
A
HIS
255
n
173
HIS
255
A
ASP
256
n
174
ASP
256
A
VAL
257
n
175
VAL
257
A
LEU
258
n
176
LEU
258
A
SER
259
n
177
SER
259
A
GLU
260
n
178
GLU
260
A
THR
261
n
179
THR
261
A
LEU
262
n
180
LEU
262
A
LEU
263
n
181
LEU
263
A
GLU
264
n
182
GLU
264
A
GLY
265
n
183
GLY
265
A
TYR
266
n
184
TYR
266
A
TYR
267
n
185
TYR
267
A
ALA
268
n
186
ALA
268
A
TYR
269
n
187
TYR
269
A
TYR
270
n
188
TYR
270
A
PHE
271
n
189
PHE
271
A
SER
272
n
190
SER
272
A
ALA
273
n
191
ALA
273
A
PHE
274
n
192
PHE
274
A
SER
275
n
193
SER
275
A
ALA
276
n
194
ALA
276
A
VAL
277
n
195
VAL
277
A
PHE
278
n
196
PHE
278
A
PHE
279
n
197
PHE
279
A
PHE
280
n
198
PHE
280
A
VAL
281
n
199
VAL
281
A
PRO
282
n
200
PRO
282
A
LEU
283
n
201
LEU
283
A
ILE
284
n
202
ILE
284
A
ILE
285
n
203
ILE
285
A
SER
286
n
204
SER
286
A
THR
287
n
205
THR
287
A
VAL
288
n
206
VAL
288
A
CYS
289
n
207
CYS
289
A
TYR
290
n
208
TYR
290
A
VAL
291
n
209
VAL
291
A
SER
292
n
210
SER
292
A
ILE
293
n
211
ILE
293
A
ILE
294
n
212
ILE
294
A
ARG
295
n
213
ARG
295
A
CYS
296
n
214
CYS
296
A
LEU
297
n
215
LEU
297
A
SER
298
n
216
SER
298
A
SER
299
n
217
SER
299
A
SER
300
n
218
SER
300
A
ALA
301
n
219
ALA
301
A
ASN
1002
n
220
ASN
1002
A
ILE
1003
n
221
ILE
1003
A
PHE
1004
n
222
PHE
1004
A
GLU
1005
n
223
GLU
1005
A
MET
1006
n
224
MET
1006
A
LEU
1007
n
225
LEU
1007
A
ARG
1008
n
226
ARG
1008
A
ILE
1009
n
227
ILE
1009
A
ASP
1010
n
228
ASP
1010
A
GLU
1011
n
229
GLU
1011
A
GLY
1012
n
230
GLY
1012
A
LEU
1013
n
231
LEU
1013
A
ARG
1014
n
232
ARG
1014
A
LEU
1015
n
233
LEU
1015
A
LYS
1016
n
234
LYS
1016
A
ILE
1017
n
235
ILE
1017
A
TYR
1018
n
236
TYR
1018
A
LYS
1019
n
237
LYS
1019
A
ASN
1020
n
238
ASN
1020
A
THR
1021
n
239
THR
1021
A
GLU
1022
n
240
GLU
1022
A
GLY
1023
n
241
GLY
1023
A
TYR
1024
n
242
TYR
1024
A
TYR
1025
n
243
TYR
1025
A
THR
1026
n
244
THR
1026
A
ILE
1027
n
245
ILE
1027
A
GLY
1028
n
246
GLY
1028
A
ILE
1029
n
247
ILE
1029
A
GLY
1030
n
248
GLY
1030
A
HIS
1031
n
249
HIS
1031
A
LEU
1032
n
250
LEU
1032
A
LEU
1033
n
251
LEU
1033
A
THR
1034
n
252
THR
1034
A
LYS
1035
n
253
LYS
1035
A
SER
1036
n
254
SER
1036
A
PRO
1037
n
255
PRO
1037
A
SER
1038
n
256
SER
1038
A
LEU
1039
n
257
LEU
1039
A
ASN
1040
n
258
ASN
1040
A
ALA
1041
n
259
ALA
1041
A
ALA
1042
n
260
ALA
1042
A
LYS
1043
n
261
LYS
1043
A
SER
1044
n
262
SER
1044
A
GLU
1045
n
263
GLU
1045
A
LEU
1046
n
264
LEU
1046
A
ASP
1047
n
265
ASP
1047
A
LYS
1048
n
266
LYS
1048
A
ALA
1049
n
267
ALA
1049
A
ILE
1050
n
268
ILE
1050
A
GLY
1051
n
269
GLY
1051
A
ARG
1052
n
270
ARG
1052
A
ASN
1053
n
271
ASN
1053
A
THR
1054
n
272
THR
1054
A
ASN
1055
n
273
ASN
1055
A
GLY
1056
n
274
GLY
1056
A
VAL
1057
n
275
VAL
1057
A
ILE
1058
n
276
ILE
1058
A
THR
1059
n
277
THR
1059
A
LYS
1060
n
278
LYS
1060
A
ASP
1061
n
279
ASP
1061
A
GLU
1062
n
280
GLU
1062
A
ALA
1063
n
281
ALA
1063
A
GLU
1064
n
282
GLU
1064
A
LYS
1065
n
283
LYS
1065
A
LEU
1066
n
284
LEU
1066
A
PHE
1067
n
285
PHE
1067
A
ASN
1068
n
286
ASN
1068
A
GLN
1069
n
287
GLN
1069
A
ASP
1070
n
288
ASP
1070
A
VAL
1071
n
289
VAL
1071
A
ASP
1072
n
290
ASP
1072
A
ALA
1073
n
291
ALA
1073
A
ALA
1074
n
292
ALA
1074
A
VAL
1075
n
293
VAL
1075
A
ARG
1076
n
294
ARG
1076
A
GLY
1077
n
295
GLY
1077
A
ILE
1078
n
296
ILE
1078
A
LEU
1079
n
297
LEU
1079
A
ARG
1080
n
298
ARG
1080
A
ASN
1081
n
299
ASN
1081
A
ALA
1082
n
300
ALA
1082
A
LYS
1083
n
301
LYS
1083
A
LEU
1084
n
302
LEU
1084
A
LYS
1085
n
303
LYS
1085
A
PRO
1086
n
304
PRO
1086
A
VAL
1087
n
305
VAL
1087
A
TYR
1088
n
306
TYR
1088
A
ASP
1089
n
307
ASP
1089
A
SER
1090
n
308
SER
1090
A
LEU
1091
n
309
LEU
1091
A
ASP
1092
n
310
ASP
1092
A
ALA
1093
n
311
ALA
1093
A
VAL
1094
n
312
VAL
1094
A
ARG
1095
n
313
ARG
1095
A
ARG
1096
n
314
ARG
1096
A
ALA
1097
n
315
ALA
1097
A
ALA
1098
n
316
ALA
1098
A
LEU
1099
n
317
LEU
1099
A
ILE
1100
n
318
ILE
1100
A
ASN
1101
n
319
ASN
1101
A
MET
1102
n
320
MET
1102
A
VAL
1103
n
321
VAL
1103
A
PHE
1104
n
322
PHE
1104
A
GLN
1105
n
323
GLN
1105
A
MET
1106
n
324
MET
1106
A
GLY
1107
n
325
GLY
1107
A
GLU
1108
n
326
GLU
1108
A
THR
1109
n
327
THR
1109
A
GLY
1110
n
328
GLY
1110
A
VAL
1111
n
329
VAL
1111
A
ALA
1112
n
330
ALA
1112
A
GLY
1113
n
331
GLY
1113
A
PHE
1114
n
332
PHE
1114
A
THR
1115
n
333
THR
1115
A
ASN
1116
n
334
ASN
1116
A
SER
1117
n
335
SER
1117
A
LEU
1118
n
336
LEU
1118
A
ARG
1119
n
337
ARG
1119
A
MET
1120
n
338
MET
1120
A
LEU
1121
n
339
LEU
1121
A
GLN
1122
n
340
GLN
1122
A
GLN
1123
n
341
GLN
1123
A
LYS
1124
n
342
LYS
1124
A
ARG
1125
n
343
ARG
1125
A
TRP
1126
n
344
TRP
1126
A
ASP
1127
n
345
ASP
1127
A
GLU
1128
n
346
GLU
1128
A
ALA
1129
n
347
ALA
1129
A
ALA
1130
n
348
ALA
1130
A
VAL
1131
n
349
VAL
1131
A
ASN
1132
n
350
ASN
1132
A
LEU
1133
n
351
LEU
1133
A
ALA
1134
n
352
ALA
1134
A
LYS
1135
n
353
LYS
1135
A
SER
1136
n
354
SER
1136
A
ARG
1137
n
355
ARG
1137
A
TRP
1138
n
356
TRP
1138
A
TYR
1139
n
357
TYR
1139
A
ASN
1140
n
358
ASN
1140
A
GLN
1141
n
359
GLN
1141
A
THR
1142
n
360
THR
1142
A
PRO
1143
n
361
PRO
1143
A
ASN
1144
n
362
ASN
1144
A
ARG
1145
n
363
ARG
1145
A
ALA
1146
n
364
ALA
1146
A
LYS
1147
n
365
LYS
1147
A
ARG
1148
n
366
ARG
1148
A
VAL
1149
n
367
VAL
1149
A
ILE
1150
n
368
ILE
1150
A
THR
1151
n
369
THR
1151
A
THR
1152
n
370
THR
1152
A
PHE
1153
n
371
PHE
1153
A
ARG
1154
n
372
ARG
1154
A
THR
1155
n
373
THR
1155
A
GLY
1156
n
374
GLY
1156
A
THR
1157
n
375
THR
1157
A
TRP
1158
n
376
TRP
1158
A
ASP
1159
n
377
ASP
1159
A
ALA
1160
n
378
ALA
1160
A
TYR
1161
n
379
TYR
1161
A
ALA
303
n
380
ALA
303
A
ASN
304
n
381
ASN
304
A
ARG
305
n
382
ARG
305
A
SER
306
n
383
SER
306
A
LYS
307
n
384
LYS
307
A
LYS
308
n
385
LYS
308
A
SER
309
n
386
SER
309
A
ARG
310
n
387
ARG
310
A
ALA
311
n
388
ALA
311
A
LEU
312
n
389
LEU
312
A
PHE
313
n
390
PHE
313
A
LEU
314
n
391
LEU
314
A
SER
315
n
392
SER
315
A
ALA
316
n
393
ALA
316
A
ALA
317
n
394
ALA
317
A
VAL
318
n
395
VAL
318
A
PHE
319
n
396
PHE
319
A
CYS
320
n
397
CYS
320
A
ILE
321
n
398
ILE
321
A
PHE
322
n
399
PHE
322
A
ILE
323
n
400
ILE
323
A
ILE
324
n
401
ILE
324
A
CYS
325
n
402
CYS
325
A
PHE
326
n
403
PHE
326
A
GLY
327
n
404
GLY
327
A
PRO
328
n
405
PRO
328
A
THR
329
n
406
THR
329
A
ASN
330
n
407
ASN
330
A
VAL
331
n
408
VAL
331
A
LEU
332
n
409
LEU
332
A
LEU
333
n
410
LEU
333
A
ILE
334
n
411
ILE
334
A
ALA
335
n
412
ALA
335
A
HIS
336
n
413
HIS
336
A
TYR
337
n
414
TYR
337
A
SER
338
n
415
SER
338
A
PHE
339
n
416
PHE
339
A
LEU
340
n
417
LEU
340
A
SER
341
n
418
SER
341
A
HIS
342
n
419
HIS
342
A
THR
343
n
420
THR
343
A
SER
344
n
421
SER
344
A
THR
345
n
422
THR
345
A
THR
346
n
423
THR
346
A
GLU
347
n
424
GLU
347
A
ALA
348
n
425
ALA
348
A
ALA
349
n
426
ALA
349
A
TYR
350
n
427
TYR
350
A
PHE
351
n
428
PHE
351
A
ALA
352
n
429
ALA
352
A
TYR
353
n
430
TYR
353
A
LEU
354
n
431
LEU
354
A
LEU
355
n
432
LEU
355
A
CYS
356
n
433
CYS
356
A
VAL
357
n
434
VAL
357
A
CYS
358
n
435
CYS
358
A
VAL
359
n
436
VAL
359
A
SER
360
n
437
SER
360
A
SER
361
n
438
SER
361
A
ILE
362
n
439
ILE
362
A
SER
363
n
440
SER
363
A
CYS
364
n
441
CYS
364
A
CYS
365
n
442
CYS
365
A
ILE
366
n
443
ILE
366
A
ASP
367
n
444
ASP
367
A
PRO
368
n
445
PRO
368
A
LEU
369
n
446
LEU
369
A
ILE
370
n
447
ILE
370
A
TYR
371
n
448
TYR
371
A
TYR
372
n
449
TYR
372
A
TYR
373
n
450
TYR
373
A
ALA
374
n
451
ALA
374
A
SER
375
n
452
SER
375
A
SER
376
n
453
SER
376
A
GLU
377
n
454
GLU
377
A
CYS
378
n
455
CYS
378
A
n
456
379
A
n
457
380
A
n
458
381
A
n
459
382
A
n
460
383
A
n
461
384
A
n
462
385
A
n
463
386
A
n
464
387
A
n
465
388
A
n
466
389
A
n
467
390
A
n
468
391
A
n
469
392
A
n
470
393
A
n
471
394
A
n
472
395
A
n
473
396
A
n
474
397
A
n
475
398
A
n
476
399
A
n
477
400
A
n
478
401
A
n
479
402
A
n
480
403
A
n
481
404
A
n
482
405
A
n
483
406
A
n
484
407
A
0.1412
0.0366
0.0877
0.1779
-0.1284
0.1878
-0.0052
0.0371
-0.0278
-0.0658
0.0116
0.0405
0.0231
0.0034
-0.0030
0.2563
0.0145
0.0126
0.2252
-0.0069
0.2419
refined
-4.0967
-8.5829
27.7598
X-RAY DIFFRACTION
A
91
A
5002
X-RAY DIFFRACTION
1
all
author_and_software_defined_assembly
PISA
1
monomeric
A
ASP
148
A
OD2
ASP
66
1_555
A
NA
2012
M
NA
NA
1_555
A
SER
189
A
OG
SER
107
1_555
98.1
A
ASP
148
A
OD2
ASP
66
1_555
A
NA
2012
M
NA
NA
1_555
A
ASP
367
A
OD2
ASP
444
1_555
77.4
A
SER
189
A
OG
SER
107
1_555
A
NA
2012
M
NA
NA
1_555
A
ASP
367
A
OD2
ASP
444
1_555
157.7
A
ASP
148
A
OD2
ASP
66
1_555
A
NA
2012
M
NA
NA
1_555
A
HOH
3065
N
O
HOH
1_555
84.5
A
SER
189
A
OG
SER
107
1_555
A
NA
2012
M
NA
NA
1_555
A
HOH
3065
N
O
HOH
1_555
83.6
A
ASP
367
A
OD2
ASP
444
1_555
A
NA
2012
M
NA
NA
1_555
A
HOH
3065
N
O
HOH
1_555
117.2
A
ASP
148
A
OD2
ASP
66
1_555
A
NA
2012
M
NA
NA
1_555
A
HOH
3066
N
O
HOH
1_555
158.3
A
SER
189
A
OG
SER
107
1_555
A
NA
2012
M
NA
NA
1_555
A
HOH
3066
N
O
HOH
1_555
97.5
A
ASP
367
A
OD2
ASP
444
1_555
A
NA
2012
M
NA
NA
1_555
A
HOH
3066
N
O
HOH
1_555
82.5
A
HOH
3065
N
O
HOH
1_555
A
NA
2012
M
NA
NA
1_555
A
HOH
3066
N
O
HOH
1_555
112.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
246
A
N
VAL
164
A
O
ILE
251
A
O
ILE
169
A
N
ARG
1014
A
N
ARG
232
A
O
GLY
1028
A
O
GLY
246
A
N
TYR
1025
A
N
TYR
243
A
O
LEU
1033
A
O
LEU
251
1
A
CD
LYS
132
A
CD
LYS
50
0
Y
1
A
CE
LYS
132
A
CE
LYS
50
0
Y
1
A
NZ
LYS
132
A
NZ
LYS
50
0
Y
1
A
CD1
LEU
216
A
CD1
LEU
134
0
Y
1
A
CD2
LEU
216
A
CD2
LEU
134
0
Y
1
A
CG
LEU
297
A
CG
LEU
215
0
Y
1
A
CD1
LEU
297
A
CD1
LEU
215
0
Y
1
A
CD2
LEU
297
A
CD2
LEU
215
0
Y
1
A
CG
TYR
1024
A
CG
TYR
242
0
Y
1
A
CD1
TYR
1024
A
CD1
TYR
242
0
Y
1
A
CD2
TYR
1024
A
CD2
TYR
242
0
Y
1
A
CE1
TYR
1024
A
CE1
TYR
242
0
Y
1
A
CE2
TYR
1024
A
CE2
TYR
242
0
Y
1
A
CZ
TYR
1024
A
CZ
TYR
242
0
Y
1
A
OH
TYR
1024
A
OH
TYR
242
0
Y
1
A
CD
LYS
1048
A
CD
LYS
266
0
Y
1
A
CE
LYS
1048
A
CE
LYS
266
0
Y
1
A
NZ
LYS
1048
A
NZ
LYS
266
0
Y
1
A
CG
ARG
1137
A
CG
ARG
355
0
Y
1
A
CD
ARG
1137
A
CD
ARG
355
0
Y
1
A
NE
ARG
1137
A
NE
ARG
355
0
Y
1
A
CZ
ARG
1137
A
CZ
ARG
355
0
Y
1
A
NH1
ARG
1137
A
NH1
ARG
355
0
Y
1
A
NH2
ARG
1137
A
NH2
ARG
355
0
Y
1
A
CD
LYS
1147
A
CD
LYS
365
0
Y
1
A
CE
LYS
1147
A
CE
LYS
365
0
Y
1
A
NZ
LYS
1147
A
NZ
LYS
365
0
Y
1
A
CG
ARG
305
A
CG
ARG
382
0
Y
1
A
CD
ARG
305
A
CD
ARG
382
0
Y
1
A
NE
ARG
305
A
NE
ARG
382
0
Y
1
A
CZ
ARG
305
A
CZ
ARG
382
0
Y
1
A
NH1
ARG
305
A
NH1
ARG
382
0
Y
1
A
NH2
ARG
305
A
NH2
ARG
382
0
Y
1
A
C8
OLC
2002
C
C8
OLC
0
N
1
A
C13
OLC
2002
C
C13
OLC
0
N
1
A
C14
OLC
2002
C
C14
OLC
0
N
1
A
C13
OLC
2003
D
C13
OLC
0
N
1
A
C14
OLC
2003
D
C14
OLC
0
N
1
A
C4
OLC
2004
E
C4
OLC
0
N
1
A
C3
OLC
2004
E
C3
OLC
0
N
1
A
C2
OLC
2004
E
C2
OLC
0
N
1
A
O20
OLC
2006
G
O20
OLC
0
N
1
A
C8
OLC
2010
K
C8
OLC
0
N
1
A
C7
OLC
2010
K
C7
OLC
0
N
1
A
C2
OLC
2010
K
C2
OLC
0
N
1
A
C1
OLC
2010
K
C1
OLC
0
N
1
A
SER
83
A
SER
1
1
Y
1
A
GLY
84
A
GLY
2
1
Y
1
A
THR
85
A
THR
3
1
Y
1
A
ALA
86
A
ALA
4
1
Y
1
A
PHE
87
A
PHE
5
1
Y
1
A
ILE
88
A
ILE
6
1
Y
1
A
SER
89
A
SER
7
1
Y
1
A
GLU
90
A
GLU
8
1
Y
1
A
GLN
209
A
GLN
127
1
Y
1
A
SER
210
A
SER
128
1
Y
1
A
LEU
211
A
LEU
129
1
Y
1
A
SER
212
A
SER
130
1
Y
1
A
TRP
213
A
TRP
131
1
Y
1
A
GLN
379
A
GLN
456
1
Y
1
A
ARG
380
A
ARG
457
1
Y
1
A
TYR
381
A
TYR
458
1
Y
1
A
VAL
382
A
VAL
459
1
Y
1
A
TYR
383
A
TYR
460
1
Y
1
A
SER
384
A
SER
461
1
Y
1
A
ILE
385
A
ILE
462
1
Y
1
A
LEU
386
A
LEU
463
1
Y
1
A
CYS
387
A
CYS
464
1
Y
1
A
CYS
388
A
CYS
465
1
Y
1
A
LYS
389
A
LYS
466
1
Y
1
A
GLU
390
A
GLU
467
1
Y
1
A
SER
391
A
SER
468
1
Y
1
A
SER
392
A
SER
469
1
Y
1
A
ASP
393
A
ASP
470
1
Y
1
A
PRO
394
A
PRO
471
1
Y
1
A
SER
395
A
SER
472
1
Y
1
A
CYS
396
A
CYS
473
1
Y
1
A
TYR
397
A
TYR
474
1
Y
1
A
HIS
398
A
HIS
475
1
Y
1
A
HIS
399
A
HIS
476
1
Y
1
A
HIS
400
A
HIS
477
1
Y
1
A
HIS
401
A
HIS
478
1
Y
1
A
HIS
402
A
HIS
479
1
Y
1
A
HIS
403
A
HIS
480
1
Y
1
A
HIS
404
A
HIS
481
1
Y
1
A
HIS
405
A
HIS
482
1
Y
1
A
HIS
406
A
HIS
483
1
Y
1
A
HIS
407
A
HIS
484
1
Y
1
A
A
O
N
ASN
GLY
1020
1023
2.14
1
A
ARG
1125
14.02
1
A
A
C
N
LYS
ARG
1124
1125
0.213
0.023
1.336
1.549
Y
1
A
LEU
103
-129.81
-63.66
1
A
MET
131
-34.49
-30.43
1
A
TYR
206
-116.19
77.41
1
A
LEU
1033
-90.81
-66.42
1
A
PHE
1114
-97.96
33.18
1
A
LYS
1124
83.23
10.12
1
A
SER
338
-102.10
-78.10
224.910
46.5549
19.340
25.2010
-0.0000
-0.0000
-8.8018
0.0000
-16.3993
0.2350
0.2180
0.2188
0.2188
2.20
28.2730
1306
28455
25921
5.0400
91.0100
1.000
0.000
0.8116
0.2600
RANDOM
1
0.000
MOLECULAR REPLACEMENT
24.9600
0.8300
1.1000
PDB code 3ODU
ML
FLAT BULK SOLVENT MODEL
59.4320
0.3440
2.20
28.2730
91
3824
263
0
3470
0.008
3809
0.948
5111
0.060
586
0.006
611
14.965
1453
0.3808
0.3184
2.2874
110
2190
2300
9
75.0000
0.3101
0.2846
2.3915
136
2533
2669
9
85.0000
0.2611
0.2508
2.5175
141
2627
2768
9
89.0000
0.2337
0.2307
2.6751
133
2721
2854
9
92.0000
0.2455
0.2186
2.8814
165
2761
2926
9
93.0000
0.2713
0.2233
3.1711
159
2850
3009
9
95.0000
0.2553
0.2116
3.6291
143
2922
3065
9
97.0000
0.2074
0.1840
4.5692
161
2894
3055
9
96.0000
0.1828
0.2078
28.2755
158
3117
3275
9
97.0000
2.200
30.000
3VW7
28455
27181
1
1
0.135
1.284
1
7.200
4.800
95.600
0.575
2.200
2.250
1585
0.935
1
3.300
85.700
0.537
2.250
2.310
1717
0.968
1
3.600
91.700
0.504
2.310
2.370
1755
0.997
1
4.300
94.900
0.466
2.370
2.440
1782
1.010
1
4.600
95.700
0.404
2.440
2.520
1786
1.118
1
4.900
96.100
0.379
2.520
2.610
1809
1.093
1
4.900
96.300
0.301
2.610
2.710
1801
1.210
1
5.000
96.400
0.267
2.710
2.840
1801
1.245
1
5.100
97.000
0.241
2.840
2.990
1863
1.350
1
5.200
97.500
0.204
2.990
3.170
1840
1.390
1
5.200
97.700
0.153
3.170
3.420
1856
1.384
1
5.300
98.000
0.113
3.420
3.760
1875
1.352
1
5.300
98.500
0.103
3.760
4.300
1885
1.629
1
5.300
98.500
0.085
4.300
5.420
1783
1.576
1
5.100
91.000
0.066
5.420
30.000
2043
1.503
1
5.100
98.600
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.7_650
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
Locally
modified Blu-Ice GUI interface to EPICS control
data reduction
HKL-2000
phasing
PHENIX
(phaser)
Crystal structure of human protease-activated receptor 1 (PAR1) bound with antagonist vorapaxar at 2.2 angstrom
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
5
N
N
6
N
N
A
ASP
91
A
ASP
9
HELX_P
A
THR
97
A
THR
15
1
1
7
A
SER
98
A
SER
16
HELX_P
A
LEU
103
A
LEU
21
1
2
6
A
LEU
103
A
LEU
21
HELX_P
A
MET
131
A
MET
49
1
3
29
A
LYS
132
A
LYS
50
HELX_P
A
LYS
134
A
LYS
52
5
4
3
A
LYS
135
A
LYS
53
HELX_P
A
SER
153
A
SER
71
1
5
19
A
VAL
154
A
VAL
72
HELX_P
A
SER
164
A
SER
82
1
6
11
A
GLY
171
A
GLY
89
HELX_P
A
TYR
206
A
TYR
124
1
7
36
A
THR
215
A
THR
133
HELX_P
A
LEU
239
A
LEU
157
1
8
25
A
GLU
264
A
GLU
182
HELX_P
A
LEU
297
A
LEU
215
1
9
34
A
ASN
1002
A
ASN
220
HELX_P
A
GLY
1012
A
GLY
230
1
10
11
A
SER
1038
A
SER
256
HELX_P
A
GLY
1051
A
GLY
269
1
11
14
A
THR
1059
A
THR
277
HELX_P
A
ARG
1080
A
ARG
298
1
12
22
A
LEU
1084
A
LEU
302
HELX_P
A
ASP
1089
A
ASP
307
1
13
6
A
ASP
1092
A
ASP
310
HELX_P
A
GLY
1113
A
GLY
331
1
14
22
A
PHE
1114
A
PHE
332
HELX_P
A
GLN
1123
A
GLN
341
1
15
10
A
ARG
1125
A
ARG
343
HELX_P
A
ALA
1134
A
ALA
352
1
16
10
A
SER
1136
A
SER
354
HELX_P
A
THR
1142
A
THR
360
1
17
7
A
THR
1142
A
THR
360
HELX_P
A
GLY
1156
A
GLY
374
1
18
15
A
TRP
1158
A
TRP
376
HELX_P
A
ASN
304
A
ASN
381
1
19
6
A
ASN
304
A
ASN
381
HELX_P
A
CYS
325
A
CYS
402
1
20
22
A
PHE
326
A
PHE
403
HELX_P
A
PHE
339
A
PHE
416
1
21
14
A
THR
346
A
THR
423
HELX_P
A
SER
361
A
SER
438
1
22
16
A
ILE
362
A
ILE
439
HELX_P
A
ALA
374
A
ALA
451
1
23
13
disulf
2.042
A
CYS
175
A
SG
CYS
93
1_555
A
CYS
254
A
SG
CYS
172
1_555
metalc
2.817
A
ASP
148
A
OD2
ASP
66
1_555
A
NA
2012
M
NA
NA
1_555
metalc
2.569
A
SER
189
A
OG
SER
107
1_555
A
NA
2012
M
NA
NA
1_555
metalc
2.400
A
ASP
367
A
OD2
ASP
444
1_555
A
NA
2012
M
NA
NA
1_555
metalc
2.333
A
NA
2012
M
NA
NA
1_555
A
HOH
3065
N
O
HOH
1_555
metalc
2.429
A
NA
2012
M
NA
NA
1_555
A
HOH
3066
N
O
HOH
1_555
Signaling protein/antagonist
High resolution structure, protease-activated receptor 1, inactive conformation, antagonist vorapaxar, G protein-coupled receptor, signaling protein, membrane protein, thrombin receptor-antagonist complex, Signaling protein-antagonist complex
PAR1_HUMAN
UNP
1
86
P25116
AFISEDASGYLTSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSG
SDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQ
VPGLNITTCHDVLNETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSA
LYS_BPT4
UNP
1
2
P00720
NIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILRN
AKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAY
PAR1_HUMAN
UNP
1
303
P25116
ANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYV
YSILCCKESSDPS
86
301
3VW7
86
301
P25116
A
1
4
219
2
161
3VW7
1002
1161
P00720
A
2
220
379
303
395
3VW7
303
395
P25116
A
3
380
472
1
expression tag
SER
83
3VW7
A
P25116
UNP
1
1
expression tag
GLY
84
3VW7
A
P25116
UNP
2
1
expression tag
THR
85
3VW7
A
P25116
UNP
3
1
ASN
engineered mutation
GLY
250
3VW7
A
P25116
UNP
250
168
1
ASN
engineered mutation
SER
259
3VW7
A
P25116
UNP
259
177
2
ASP
engineered mutation
ASN
1020
3VW7
A
P00720
UNP
20
238
2
CYS
engineered mutation
THR
1054
3VW7
A
P00720
UNP
54
272
2
CYS
engineered mutation
ALA
1097
3VW7
A
P00720
UNP
97
315
3
expression tag
CYS
396
3VW7
A
P25116
UNP
473
3
expression tag
TYR
397
3VW7
A
P25116
UNP
474
3
expression tag
HIS
398
3VW7
A
P25116
UNP
475
3
expression tag
HIS
399
3VW7
A
P25116
UNP
476
3
expression tag
HIS
400
3VW7
A
P25116
UNP
477
3
expression tag
HIS
401
3VW7
A
P25116
UNP
478
3
expression tag
HIS
402
3VW7
A
P25116
UNP
479
3
expression tag
HIS
403
3VW7
A
P25116
UNP
480
3
expression tag
HIS
404
3VW7
A
P25116
UNP
481
3
expression tag
HIS
405
3VW7
A
P25116
UNP
482
3
expression tag
HIS
406
3VW7
A
P25116
UNP
483
3
expression tag
HIS
407
3VW7
A
P25116
UNP
484
2
3
anti-parallel
anti-parallel
anti-parallel
A
THR
243
A
THR
161
A
VAL
246
A
VAL
164
A
ILE
251
A
ILE
169
A
CYS
254
A
CYS
172
A
ARG
1014
A
ARG
232
A
LYS
1019
A
LYS
237
A
TYR
1025
A
TYR
243
A
GLY
1028
A
GLY
246
A
HIS
1031
A
HIS
249
A
THR
1034
A
THR
252
BINDING SITE FOR RESIDUE VPX A 2001
A
VPX
2001
Software
16
BINDING SITE FOR RESIDUE OLC A 2002
A
OLC
2002
Software
5
BINDING SITE FOR RESIDUE OLC A 2003
A
OLC
2003
Software
4
BINDING SITE FOR RESIDUE OLC A 2004
A
OLC
2004
Software
10
BINDING SITE FOR RESIDUE OLC A 2005
A
OLC
2005
Software
8
BINDING SITE FOR RESIDUE OLC A 2006
A
OLC
2006
Software
6
BINDING SITE FOR RESIDUE OLC A 2007
A
OLC
2007
Software
6
BINDING SITE FOR RESIDUE OLC A 2008
A
OLC
2008
Software
5
BINDING SITE FOR RESIDUE OLC A 2009
A
OLC
2009
Software
4
BINDING SITE FOR RESIDUE OLC A 2010
A
OLC
2010
Software
4
BINDING SITE FOR RESIDUE CL A 2011
A
CL
2011
Software
2
BINDING SITE FOR RESIDUE NA A 2012
A
NA
2012
Software
6
A
TYR
183
A
TYR
101
16
1_555
A
TYR
187
A
TYR
105
16
1_555
A
PRO
236
A
PRO
154
16
1_555
A
HIS
255
A
HIS
173
16
1_555
A
ASP
256
A
ASP
174
16
1_555
A
VAL
257
A
VAL
175
16
1_555
A
LEU
258
A
LEU
176
16
1_555
A
PHE
271
A
PHE
189
16
1_555
A
ARG
1080
A
ARG
298
16
2_455
A
LEU
332
A
LEU
409
16
1_555
A
LEU
333
A
LEU
410
16
1_555
A
TYR
337
A
TYR
414
16
1_555
A
ALA
349
A
ALA
426
16
1_555
A
TYR
350
A
TYR
427
16
1_555
A
TYR
353
A
TYR
430
16
1_555
A
HOH
3004
N
HOH
16
1_555
A
PHE
157
A
PHE
75
5
3_555
A
TYR
206
A
TYR
124
5
1_555
A
ILE
284
A
ILE
202
5
1_555
A
ARG
295
A
ARG
213
5
1_555
A
OLC
2003
D
OLC
5
1_555
A
SER
160
A
SER
78
4
3_555
A
SER
164
A
SER
82
4
3_555
A
OLC
2002
C
OLC
4
1_555
A
OLC
2004
E
OLC
4
3_555
A
PHE
113
A
PHE
31
10
1_555
A
PRO
156
A
PRO
74
10
1_555
A
SER
160
A
SER
78
10
1_555
A
PHE
163
A
PHE
81
10
1_555
A
SER
164
A
SER
82
10
1_555
A
LEU
202
A
LEU
120
10
3_545
A
LEU
229
A
LEU
147
10
3_545
A
PHE
278
A
PHE
196
10
3_545
A
OLC
2003
D
OLC
10
3_545
A
OLC
2010
K
OLC
10
3_545
A
MET
122
A
MET
40
8
1_555
A
VAL
126
A
VAL
44
8
1_555
A
PHE
127
A
PHE
45
8
1_555
A
CYS
365
A
CYS
442
8
1_555
A
PRO
368
A
PRO
445
8
1_555
A
TYR
371
A
TYR
448
8
1_555
A
TYR
372
A
TYR
449
8
1_555
A
SER
375
A
SER
452
8
1_555
A
TRP
100
A
TRP
18
6
1_555
A
PRO
328
A
PRO
405
6
1_555
A
ALA
348
A
ALA
425
6
1_555
A
PHE
351
A
PHE
428
6
1_555
A
CYS
356
A
CYS
433
6
1_555
A
HOH
3067
N
HOH
6
1_555
A
GLY
327
A
GLY
404
6
1_555
A
PRO
328
A
PRO
405
6
1_555
A
THR
343
A
THR
420
6
1_555
A
THR
346
A
THR
423
6
1_555
A
ALA
348
A
ALA
425
6
1_555
A
CYS
356
A
CYS
433
6
1_555
A
VAL
139
A
VAL
57
5
1_555
A
HIS
143
A
HIS
61
5
1_555
A
SER
220
A
SER
138
5
1_555
A
LEU
224
A
LEU
142
5
1_555
A
ALA
228
A
ALA
146
5
1_555
A
PRO
236
A
PRO
154
4
1_555
A
LYS
240
A
LYS
158
4
1_555
A
TYR
270
A
TYR
188
4
1_555
A
PHE
271
A
PHE
189
4
1_555
A
PHE
163
A
PHE
81
4
3_555
A
PHE
221
A
PHE
139
4
1_555
A
THR
222
A
THR
140
4
1_555
A
OLC
2004
E
OLC
4
3_555
A
LYS
135
A
LYS
53
2
1_555
A
LYS
307
A
LYS
384
2
1_555
A
LEU
144
A
LEU
62
6
1_555
A
ASP
148
A
ASP
66
6
1_555
A
SER
189
A
SER
107
6
1_555
A
ASP
367
A
ASP
444
6
1_555
A
HOH
3065
N
HOH
6
1_555
A
HOH
3066
N
HOH
6
1_555
19
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