0.011619
0.000000
0.000000
0.000000
0.010887
0.000000
0.000000
0.000000
0.008625
0.00000
0.00000
0.00000
Schmidt, B.H.
Burgin, A.B.
Deweese, J.E.
Osheroff, N.
Berger, J.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
86.064
91.851
115.939
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C9 H12 N O6 P
261.168
n
O-PHOSPHOTYROSINE
PHOSPHONOTYROSINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C10 H15 N2 O7 P S
338.274
n
3'-THIO-THYMIDINE-5'-PHOSPHATE
DNA linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
N
Y
287
N
C
Y
288
N
C
Y
289
N
N
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
S
C
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
N
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
S
N
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
O
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
O
N
438
N
C
Y
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
C
Y
443
N
C
Y
444
N
C
N
445
N
O
N
446
N
P
N
447
N
O
N
448
N
O
N
449
N
O
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
N
N
463
S
C
N
464
N
C
N
465
N
O
N
466
N
C
N
467
N
O
N
468
N
O
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
N
N
477
S
C
N
478
N
C
N
479
N
O
N
480
R
C
N
481
N
O
N
482
N
C
N
483
N
O
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
N
N
494
S
C
N
495
N
C
N
496
N
O
N
497
N
C
Y
498
N
C
Y
499
N
C
Y
500
N
C
Y
501
N
N
Y
502
N
C
Y
503
N
C
Y
504
N
C
Y
505
N
C
Y
506
N
C
N
507
N
O
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
P
N
521
N
O
N
522
N
O
N
523
N
O
N
524
N
O
N
525
N
C
N
526
R
C
N
527
N
O
N
528
S
C
N
529
N
S
N
530
N
C
N
531
R
C
N
532
N
N
N
533
N
C
N
534
N
O
N
535
N
N
N
536
N
C
N
537
N
O
N
538
N
C
N
539
N
C
N
540
N
C
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
H
N
556
N
N
N
557
S
C
N
558
N
C
N
559
N
O
N
560
N
C
Y
561
N
C
Y
562
N
C
Y
563
N
C
Y
564
N
C
Y
565
N
C
Y
566
N
C
N
567
N
O
N
568
N
O
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
H
N
574
N
H
N
575
N
H
N
576
N
H
N
577
N
H
N
578
N
H
N
579
N
H
N
580
N
N
N
581
S
C
N
582
N
C
N
583
N
O
N
584
N
C
N
585
N
C
N
586
N
C
N
587
N
O
N
588
N
H
N
589
N
H
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
594
N
H
N
595
N
H
N
596
N
H
N
597
N
H
N
598
N
H
N
599
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
Y
438
N
doub
Y
439
N
sing
Y
440
N
sing
N
441
N
sing
Y
442
N
doub
N
443
N
sing
Y
444
N
doub
N
445
N
sing
Y
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
doub
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
doub
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
doub
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
Y
495
N
doub
Y
496
N
sing
Y
497
N
sing
N
498
N
sing
Y
499
N
doub
Y
500
N
sing
Y
501
N
sing
N
502
N
sing
Y
503
N
sing
Y
504
N
doub
N
505
N
sing
Y
506
N
doub
N
507
N
sing
Y
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
doub
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
doub
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
doub
N
542
N
sing
N
543
N
sing
N
544
N
doub
N
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
doub
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
sing
Y
560
N
doub
Y
561
N
sing
Y
562
N
sing
N
563
N
sing
Y
564
N
doub
N
565
N
sing
Y
566
N
doub
N
567
N
sing
Y
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
sing
N
576
N
sing
N
577
N
sing
N
578
N
sing
N
579
N
doub
N
580
N
sing
N
581
N
sing
N
582
N
sing
N
583
N
sing
N
584
N
sing
N
585
N
sing
N
586
N
sing
N
587
N
sing
N
588
N
sing
N
589
N
sing
N
590
N
sing
UK
Nature
NATUAS
0006
0028-0836
465
641
644
10.1038/nature08974
20485342
A novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases.
2010
10.2210/pdb3l4k/pdb
pdb_00003l4k
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2009-10-18
ADSC QUANTUM 315r
DOUBLE FLAT CRYSTAL, SI (111)
SINGLE WAVELENGTH
M
x-ray
1
1.2823
1.0
8.3.1
ALS
1.2823
SYNCHROTRON
ALS BEAMLINE 8.3.1
88025.180
DNA topoisomerase 2
5.99.1.3
RESIDUES 421-1177
1
man
polymer
3269.149
DNA (5'-D(P*CP*CP*TP*AP*CP*TP*GP*CP*TP*AP*C)-3')
1
syn
polymer
4675.035
DNA (5'-D(*CP*GP*CP*GP*GP*TP*AP*GP*CP*AP*GP*TP*AP*GP*G)-3')
1
syn
polymer
3109.053
DNA (5'-D(P*GP*GP*AP*TP*GP*AP*CP*GP*AP*TP*)-3')
1
syn
polymer
4529.949
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*CP*GP*TP*CP*AP*TP*CP*C)-3')
1
syn
polymer
65.409
ZINC ION
8
syn
non-polymer
338.274
3'-THIO-THYMIDINE-5'-PHOSPHATE
1
syn
non-polymer
18.015
water
20
nat
water
DNA topoisomerase II
no
yes
SRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQILKNAEIQAIKK
IMGLQHRKKYEDTKSLRYGHLMIMTDQDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN
MPDYEKWREEESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWLRQYEPG
TVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQS
LAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAAR(PTR)IYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPE
WYLPILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEIEPLRYRMYGRIEQIGDN
VLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHDDNIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMV
AFDPHGKIKKYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELENLG
FPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQK
QEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEAR
SRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQILKNAEIQAIKK
IMGLQHRKKYEDTKSLRYGHLMIMTDQDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN
MPDYEKWREEESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWLRQYEPG
TVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQS
LAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYLP
ILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEIEPLRYRMYGRIEQIGDNVLEI
TELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHDDNIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDP
HGKIKKYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELENLGFPRF
NKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKE
TELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEAR
A
polypeptide(L)
no
no
(DC)(DC)(DT)(DA)(DC)(DT)(DG)(DC)(DT)(DA)(DC)
CCTACTGCTAC
B
polydeoxyribonucleotide
no
no
(DC)(DG)(DC)(DG)(DG)(DT)(DA)(DG)(DC)(DA)(DG)(DT)(DA)(DG)(DG)
CGCGGTAGCAGTAGG
C
polydeoxyribonucleotide
no
no
(DG)(DG)(DA)(DT)(DG)(DA)(DC)(DG)(DA)(DT)
GGATGACGAT
D
polydeoxyribonucleotide
no
no
(DC)(DG)(DC)(DG)(DA)(DA)(DT)(DC)(DG)(DT)(DC)(DA)(DT)(DC)(DC)
CGCGAATCGTCATCC
E
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
n
n
n
n
n
n
n
n
n
n
n
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n
n
n
n
n
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n
n
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n
n
n
n
n
n
n
n
y
y
n
n
n
n
n
n
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n
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n
n
n
n
brewer's yeast,lager beer yeast,yeast
sample
N2244, TOP2, TOR3, YNL088W
4932
Saccharomyces cerevisiae
4932
SACCHAROMYCES CEREVISIAE
BCY123
PLASMID
PGAL
1
2.20
44.21
THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS
VAPOR DIFFUSION, HANGING DROP
6.5
20% 1,4-BUTANEDIOL, 0.1M SODIUM ACETATE, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
22.014
1
19
B
1
C
15
15.038
B_DC1:DG15_C
1
-21.140
-0.525
-1.132
0.052
4.035
1
19
D
1
E
15
12.122
D_DG1:DC15_E
2
-25.298
2.037
0.131
-0.265
24.159
1
19
B
2
C
14
-3.515
B_DC2:DG14_C
3
-16.016
-2.249
-0.038
-0.275
17.090
1
19
D
2
E
14
-1.426
D_DG2:DC14_E
4
-19.513
2.206
0.666
-0.323
-1.211
1
20
D
3
E
13
-5.896
D_DA3:DT13_E
5
-22.775
-0.279
0.517
-0.651
10.871
1
C
5
B
11
7.661
C_DG5:DC11_B
6
-21.444
-0.562
1.244
0.105
7.223
C
6
B
10
17.142
C_DT6:DA10_B
7
-13.339
-0.939
0.010
0.410
-9.572
1
20
E
6
D
10
9.929
E_DA6:DT10_D
8
-12.681
0.645
-0.187
-0.165
4.685
1
20
C
7
B
9
10.576
C_DA7:DT9_B
9
2.951
-0.673
0.302
0.003
3.547
1
20
E
7
D
9
9.542
E_DT7:DA9_D
10
3.445
-0.238
0.032
-0.094
40.729
1
19
C
8
B
8
9.742
C_DG8:DC8_B
11
1.179
-1.240
0.688
0.145
33.638
1
19
E
8
D
8
8.352
E_DC8:DG8_D
12
0.499
-0.790
-0.073
0.110
-30.734
1
19
E
9
D
7
9.523
E_DG9:DC7_D
13
5.529
0.633
0.037
0.423
-40.672
1
19
C
9
B
7
4.326
C_DC9:DG7_B
14
0.878
-0.702
0.681
0.217
-9.058
1
20
C
10
B
6
-0.732
C_DA10:DT6_B
15
-0.877
0.661
0.385
0.024
-13.805
1
20
E
10
D
6
-0.593
E_DT10:DA6_D
16
-0.847
0.326
0.692
-0.119
4.447
1
19
E
11
D
5
5.991
E_DC11:DG5_D
17
-9.834
0.719
0.575
-0.321
-2.404
1
19
C
11
B
5
7.536
C_DG11:DC5_B
18
-12.177
0.269
-0.139
0.012
2.473
1
20
C
12
B
4
2.320
C_DT12:DA4_B
19
-20.396
-1.018
-0.065
-0.103
4.100
1
20
E
12
D
4
-2.779
E_DA12:DT4_D
20
-16.292
1.689
0.497
-0.679
0.890
12.700
B
D
1
1
14.824
C
E
15
15
0.787
3.155
-0.054
0.693
BD_DC1DG1:DC15DG15_EC
1
-4.963
23.320
11.261
2.140
-1.322
2.574
13.516
D
B
1
2
5.124
E
C
15
14
2.614
1.204
-0.290
-0.158
DB_DG1DC2:DG14DC15_CE
2
0.619
-2.635
13.448
-1.651
1.738
0.350
21.882
B
D
2
2
-3.642
C
E
14
14
0.447
-1.377
0.201
1.023
BD_DC2DG2:DC14DG14_EC
3
-3.069
8.117
21.625
2.761
-0.676
3.518
27.764
D
D
2
3
-1.597
E
E
14
13
3.480
-0.766
0.125
-1.364
DD_DG2DA3:DT13DC14_EE
4
0.730
-1.522
27.744
-2.646
-0.072
3.234
31.701
C
C
5
6
6.397
B
B
11
10
3.367
3.458
0.497
-1.313
CC_DG5DT6:DA10DC11_BB
5
7.205
-13.326
30.702
-3.056
0.452
0.648
8.519
C
E
6
6
10.700
B
D
10
10
0.557
1.580
-0.409
0.570
CE_DT6DA6:DT10DA10_DB
6
0.105
-0.710
8.371
3.079
2.802
2.095
25.865
E
C
6
7
23.397
D
B
10
9
2.669
10.189
-0.639
-1.034
EC_DA6DA7:DT9DT10_BD
7
-1.780
4.087
23.739
-4.464
1.052
0.162
3.148
C
E
7
7
-36.438
B
D
9
9
0.155
-1.786
0.004
-0.096
CE_DA7DT7:DA9DT9_DB
8
1.447
-29.531
2.151
0.197
1.511
2.730
25.446
E
C
7
8
16.795
D
B
9
8
2.529
7.296
0.647
1.009
EC_DT7DG8:DC8DA9_BD
9
0.785
-1.807
24.382
0.569
-1.284
-0.008
4.761
C
E
8
8
1.309
B
D
8
8
0.194
0.092
-0.143
0.047
CE_DG8DC8:DG8DC8_DB
10
3.938
-55.814
2.675
0.544
2.898
4.602
52.450
E
E
8
9
57.202
D
D
8
7
6.055
43.600
-0.414
1.306
EE_DC8DG9:DC7DG8_DD
11
-1.717
2.253
29.846
-4.709
0.225
0.349
-7.097
E
C
9
9
-42.227
D
B
7
7
0.327
4.705
-0.122
-0.224
EC_DG9DC9:DG7DC7_BD
12
-1.776
-15.938
-5.010
-0.308
-1.787
2.737
34.904
C
C
9
10
5.844
B
B
7
6
2.595
3.494
-0.923
0.778
CC_DC9DA10:DT6DG7_BB
13
-3.565
5.963
34.557
0.863
1.097
0.142
-3.471
C
E
10
10
10.982
B
D
6
6
0.174
-0.654
0.026
-0.157
CE_DA10DT10:DA6DT6_DB
14
-0.872
-14.637
-3.296
3.100
-0.234
2.806
34.171
E
E
10
11
10.080
D
D
6
5
2.856
5.895
0.635
-0.070
EE_DT10DC11:DG5DA6_DD
15
0.117
-0.199
33.673
-0.933
-1.064
0.079
-4.998
E
C
11
11
-19.184
D
B
5
5
0.234
1.305
0.017
-0.027
EC_DC11DG11:DC5DG5_BD
16
4.455
65.511
-1.852
-0.379
2.528
3.067
28.306
C
C
11
12
-4.097
B
B
5
4
3.040
-2.002
-0.597
-0.327
CC_DG11DT12:DA4DC5_BB
17
-0.603
1.234
28.230
-0.235
1.090
0.027
13.799
C
E
12
12
-7.695
B
D
4
4
0.052
-1.811
-0.179
0.609
CE_DT12DA12:DT4DA4_DB
18
-4.421
18.788
12.949
2.558
0.692
pdbx_struct_assembly
pdbx_struct_assembly_gen
struct_conn
chem_comp
struct_conn
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Derived calculations
Data collection
Derived calculations
Data collection
Database references
Derived calculations
Refinement description
Data collection
1
0
2010-05-26
1
1
2011-07-13
1
2
2017-09-13
1
3
2019-07-31
1
4
2023-09-06
1
5
2023-11-22
_chem_comp.type
_struct_conn.pdbx_leaving_atom_flag
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
The same protein without zinc ions soaked in
RCSB
Y
RCSB
2009-12-20
REL
REL
ZN
ZINC ION
TSP
3'-THIO-THYMIDINE-5'-PHOSPHATE
HOH
water
2RGR
PDB entry 2RGR
PDB
experimental model
ZN
1
6
ZN
ZN
1
A
ZN
3
6
ZN
ZN
3
A
ZN
4
6
ZN
ZN
4
A
ZN
5
6
ZN
ZN
5
A
ZN
6
6
ZN
ZN
6
A
ZN
7
6
ZN
ZN
7
A
ZN
8
6
ZN
ZN
8
A
TSP
11
7
TSP
TSP
11
D
ZN
16
6
ZN
ZN
16
E
HOH
100
8
HOH
HOH
100
A
HOH
101
8
HOH
HOH
101
A
HOH
102
8
HOH
HOH
102
A
HOH
103
8
HOH
HOH
103
A
HOH
104
8
HOH
HOH
104
A
HOH
105
8
HOH
HOH
105
A
HOH
106
8
HOH
HOH
106
A
HOH
107
8
HOH
HOH
107
A
HOH
108
8
HOH
HOH
108
A
HOH
109
8
HOH
HOH
109
A
HOH
110
8
HOH
HOH
110
A
HOH
111
8
HOH
HOH
111
A
HOH
112
8
HOH
HOH
112
A
HOH
113
8
HOH
HOH
113
A
HOH
114
8
HOH
HOH
114
A
HOH
115
8
HOH
HOH
115
A
HOH
116
8
HOH
HOH
116
A
HOH
117
8
HOH
HOH
117
B
HOH
118
8
HOH
HOH
118
B
HOH
119
8
HOH
HOH
119
E
SER
421
n
1
SER
421
A
ARG
422
n
2
ARG
422
A
ILE
423
n
3
ILE
423
A
THR
424
n
4
THR
424
A
ASN
425
n
5
ASN
425
A
TYR
426
n
6
TYR
426
A
PRO
427
n
7
PRO
427
A
LYS
428
n
8
LYS
428
A
LEU
429
n
9
LEU
429
A
GLU
430
n
10
GLU
430
A
ASP
431
n
11
ASP
431
A
ALA
432
n
12
ALA
432
A
ASN
433
n
13
ASN
433
A
LYS
434
n
14
LYS
434
A
ALA
435
n
15
ALA
435
A
GLY
436
n
16
GLY
436
A
THR
437
n
17
THR
437
A
LYS
438
n
18
LYS
438
A
GLU
439
n
19
GLU
439
A
GLY
440
n
20
GLY
440
A
TYR
441
n
21
TYR
441
A
LYS
442
n
22
LYS
442
A
CYS
443
n
23
CYS
443
A
THR
444
n
24
THR
444
A
LEU
445
n
25
LEU
445
A
VAL
446
n
26
VAL
446
A
LEU
447
n
27
LEU
447
A
THR
448
n
28
THR
448
A
GLU
449
n
29
GLU
449
A
GLY
450
n
30
GLY
450
A
ASP
451
n
31
ASP
451
A
SER
452
n
32
SER
452
A
ALA
453
n
33
ALA
453
A
LEU
454
n
34
LEU
454
A
SER
455
n
35
SER
455
A
LEU
456
n
36
LEU
456
A
ALA
457
n
37
ALA
457
A
VAL
458
n
38
VAL
458
A
ALA
459
n
39
ALA
459
A
GLY
460
n
40
GLY
460
A
LEU
461
n
41
LEU
461
A
ALA
462
n
42
ALA
462
A
VAL
463
n
43
VAL
463
A
VAL
464
n
44
VAL
464
A
GLY
465
n
45
GLY
465
A
ARG
466
n
46
ARG
466
A
ASP
467
n
47
ASP
467
A
TYR
468
n
48
TYR
468
A
TYR
469
n
49
TYR
469
A
GLY
470
n
50
GLY
470
A
CYS
471
n
51
CYS
471
A
TYR
472
n
52
TYR
472
A
PRO
473
n
53
PRO
473
A
LEU
474
n
54
LEU
474
A
ARG
475
n
55
ARG
475
A
GLY
476
n
56
GLY
476
A
LYS
477
n
57
LYS
477
A
MET
478
n
58
MET
478
A
LEU
479
n
59
LEU
479
A
ASN
480
n
60
ASN
480
A
VAL
481
n
61
VAL
481
A
ARG
482
n
62
ARG
482
A
GLU
483
n
63
GLU
483
A
ALA
484
n
64
ALA
484
A
SER
485
n
65
SER
485
A
ALA
486
n
66
ALA
486
A
ASP
487
n
67
ASP
487
A
GLN
488
n
68
GLN
488
A
ILE
489
n
69
ILE
489
A
LEU
490
n
70
LEU
490
A
LYS
491
n
71
LYS
491
A
ASN
492
n
72
ASN
492
A
ALA
493
n
73
ALA
493
A
GLU
494
n
74
GLU
494
A
ILE
495
n
75
ILE
495
A
GLN
496
n
76
GLN
496
A
ALA
497
n
77
ALA
497
A
ILE
498
n
78
ILE
498
A
LYS
499
n
79
LYS
499
A
LYS
500
n
80
LYS
500
A
ILE
501
n
81
ILE
501
A
MET
502
n
82
MET
502
A
GLY
503
n
83
GLY
503
A
LEU
504
n
84
LEU
504
A
GLN
505
n
85
GLN
505
A
HIS
506
n
86
HIS
506
A
ARG
507
n
87
ARG
507
A
LYS
508
n
88
LYS
508
A
LYS
509
n
89
LYS
509
A
TYR
510
n
90
TYR
510
A
GLU
511
n
91
GLU
511
A
ASP
512
n
92
ASP
512
A
THR
513
n
93
THR
513
A
LYS
514
n
94
LYS
514
A
SER
515
n
95
SER
515
A
LEU
516
n
96
LEU
516
A
ARG
517
n
97
ARG
517
A
TYR
518
n
98
TYR
518
A
GLY
519
n
99
GLY
519
A
HIS
520
n
100
HIS
520
A
LEU
521
n
101
LEU
521
A
MET
522
n
102
MET
522
A
ILE
523
n
103
ILE
523
A
MET
524
n
104
MET
524
A
THR
525
n
105
THR
525
A
ASP
526
n
106
ASP
526
A
GLN
527
n
107
GLN
527
A
ASP
528
n
108
ASP
528
A
HIS
529
n
109
HIS
529
A
ASP
530
n
110
ASP
530
A
GLY
531
n
111
GLY
531
A
SER
532
n
112
SER
532
A
HIS
533
n
113
HIS
533
A
ILE
534
n
114
ILE
534
A
LYS
535
n
115
LYS
535
A
GLY
536
n
116
GLY
536
A
LEU
537
n
117
LEU
537
A
ILE
538
n
118
ILE
538
A
ILE
539
n
119
ILE
539
A
ASN
540
n
120
ASN
540
A
PHE
541
n
121
PHE
541
A
LEU
542
n
122
LEU
542
A
GLU
543
n
123
GLU
543
A
SER
544
n
124
SER
544
A
SER
545
n
125
SER
545
A
PHE
546
n
126
PHE
546
A
PRO
547
n
127
PRO
547
A
GLY
548
n
128
GLY
548
A
LEU
549
n
129
LEU
549
A
LEU
550
n
130
LEU
550
A
ASP
551
n
131
ASP
551
A
ILE
552
n
132
ILE
552
A
GLN
553
n
133
GLN
553
A
GLY
554
n
134
GLY
554
A
PHE
555
n
135
PHE
555
A
LEU
556
n
136
LEU
556
A
LEU
557
n
137
LEU
557
A
GLU
558
n
138
GLU
558
A
PHE
559
n
139
PHE
559
A
ILE
560
n
140
ILE
560
A
THR
561
n
141
THR
561
A
PRO
562
n
142
PRO
562
A
ILE
563
n
143
ILE
563
A
ILE
564
n
144
ILE
564
A
LYS
565
n
145
LYS
565
A
VAL
566
n
146
VAL
566
A
SER
567
n
147
SER
567
A
ILE
568
n
148
ILE
568
A
THR
569
n
149
THR
569
A
LYS
570
n
150
LYS
570
A
PRO
571
n
151
PRO
571
A
THR
572
n
152
THR
572
A
LYS
573
n
153
LYS
573
A
ASN
574
n
154
ASN
574
A
THR
575
n
155
THR
575
A
ILE
576
n
156
ILE
576
A
ALA
577
n
157
ALA
577
A
PHE
578
n
158
PHE
578
A
TYR
579
n
159
TYR
579
A
ASN
580
n
160
ASN
580
A
MET
581
n
161
MET
581
A
PRO
582
n
162
PRO
582
A
ASP
583
n
163
ASP
583
A
TYR
584
n
164
TYR
584
A
GLU
585
n
165
GLU
585
A
LYS
586
n
166
LYS
586
A
TRP
587
n
167
TRP
587
A
ARG
588
n
168
ARG
588
A
GLU
589
n
169
GLU
589
A
GLU
590
n
170
GLU
590
A
GLU
591
n
171
GLU
591
A
SER
592
n
172
SER
592
A
HIS
593
n
173
HIS
593
A
LYS
594
n
174
LYS
594
A
PHE
595
n
175
PHE
595
A
THR
596
n
176
THR
596
A
TRP
597
n
177
TRP
597
A
LYS
598
n
178
LYS
598
A
GLN
599
n
179
GLN
599
A
LYS
600
n
180
LYS
600
A
TYR
601
n
181
TYR
601
A
TYR
602
n
182
TYR
602
A
LYS
603
n
183
LYS
603
A
GLY
604
n
184
GLY
604
A
LEU
605
n
185
LEU
605
A
GLY
606
n
186
GLY
606
A
THR
607
n
187
THR
607
A
SER
608
n
188
SER
608
A
LEU
609
n
189
LEU
609
A
ALA
610
n
190
ALA
610
A
GLN
611
n
191
GLN
611
A
GLU
612
n
192
GLU
612
A
VAL
613
n
193
VAL
613
A
ARG
614
n
194
ARG
614
A
GLU
615
n
195
GLU
615
A
TYR
616
n
196
TYR
616
A
PHE
617
n
197
PHE
617
A
SER
618
n
198
SER
618
A
ASN
619
n
199
ASN
619
A
LEU
620
n
200
LEU
620
A
ASP
621
n
201
ASP
621
A
ARG
622
n
202
ARG
622
A
HIS
623
n
203
HIS
623
A
LEU
624
n
204
LEU
624
A
LYS
625
n
205
LYS
625
A
ILE
626
n
206
ILE
626
A
PHE
627
n
207
PHE
627
A
HIS
628
n
208
HIS
628
A
SER
629
n
209
SER
629
A
LEU
630
n
210
LEU
630
A
GLN
631
n
211
GLN
631
A
GLY
632
n
212
GLY
632
A
ASN
633
n
213
ASN
633
A
ASP
634
n
214
ASP
634
A
LYS
635
n
215
LYS
635
A
ASP
636
n
216
ASP
636
A
TYR
637
n
217
TYR
637
A
ILE
638
n
218
ILE
638
A
ASP
639
n
219
ASP
639
A
LEU
640
n
220
LEU
640
A
ALA
641
n
221
ALA
641
A
PHE
642
n
222
PHE
642
A
SER
643
n
223
SER
643
A
LYS
644
n
224
LYS
644
A
LYS
645
n
225
LYS
645
A
LYS
646
n
226
LYS
646
A
ALA
647
n
227
ALA
647
A
ASP
648
n
228
ASP
648
A
ASP
649
n
229
ASP
649
A
ARG
650
n
230
ARG
650
A
LYS
651
n
231
LYS
651
A
GLU
652
n
232
GLU
652
A
TRP
653
n
233
TRP
653
A
LEU
654
n
234
LEU
654
A
ARG
655
n
235
ARG
655
A
GLN
656
n
236
GLN
656
A
TYR
657
n
237
TYR
657
A
GLU
658
n
238
GLU
658
A
PRO
659
n
239
PRO
659
A
GLY
660
n
240
GLY
660
A
THR
661
n
241
THR
661
A
VAL
662
n
242
VAL
662
A
LEU
663
n
243
LEU
663
A
ASP
664
n
244
ASP
664
A
PRO
665
n
245
PRO
665
A
THR
666
n
246
THR
666
A
LEU
667
n
247
LEU
667
A
LYS
668
n
248
LYS
668
A
GLU
669
n
249
GLU
669
A
ILE
670
n
250
ILE
670
A
PRO
671
n
251
PRO
671
A
ILE
672
n
252
ILE
672
A
SER
673
n
253
SER
673
A
ASP
674
n
254
ASP
674
A
PHE
675
n
255
PHE
675
A
ILE
676
n
256
ILE
676
A
ASN
677
n
257
ASN
677
A
LYS
678
n
258
LYS
678
A
GLU
679
n
259
GLU
679
A
LEU
680
n
260
LEU
680
A
ILE
681
n
261
ILE
681
A
LEU
682
n
262
LEU
682
A
PHE
683
n
263
PHE
683
A
SER
684
n
264
SER
684
A
LEU
685
n
265
LEU
685
A
ALA
686
n
266
ALA
686
A
ASP
687
n
267
ASP
687
A
ASN
688
n
268
ASN
688
A
ILE
689
n
269
ILE
689
A
ARG
690
n
270
ARG
690
A
SER
691
n
271
SER
691
A
ILE
692
n
272
ILE
692
A
PRO
693
n
273
PRO
693
A
ASN
694
n
274
ASN
694
A
VAL
695
n
275
VAL
695
A
LEU
696
n
276
LEU
696
A
ASP
697
n
277
ASP
697
A
GLY
698
n
278
GLY
698
A
PHE
699
n
279
PHE
699
A
LYS
700
n
280
LYS
700
A
PRO
701
n
281
PRO
701
A
GLY
702
n
282
GLY
702
A
GLN
703
n
283
GLN
703
A
ARG
704
n
284
ARG
704
A
LYS
705
n
285
LYS
705
A
VAL
706
n
286
VAL
706
A
LEU
707
n
287
LEU
707
A
TYR
708
n
288
TYR
708
A
GLY
709
n
289
GLY
709
A
CYS
710
n
290
CYS
710
A
PHE
711
n
291
PHE
711
A
LYS
712
n
292
LYS
712
A
LYS
713
n
293
LYS
713
A
ASN
714
n
294
ASN
714
A
LEU
715
n
295
LEU
715
A
LYS
716
n
296
LYS
716
A
SER
717
n
297
SER
717
A
GLU
718
n
298
GLU
718
A
LEU
719
n
299
LEU
719
A
LYS
720
n
300
LYS
720
A
VAL
721
n
301
VAL
721
A
ALA
722
n
302
ALA
722
A
GLN
723
n
303
GLN
723
A
LEU
724
n
304
LEU
724
A
ALA
725
n
305
ALA
725
A
PRO
726
n
306
PRO
726
A
TYR
727
n
307
TYR
727
A
VAL
728
n
308
VAL
728
A
SER
729
n
309
SER
729
A
GLU
730
n
310
GLU
730
A
CYS
731
n
311
CYS
731
A
THR
732
n
312
THR
732
A
ALA
733
n
313
ALA
733
A
TYR
734
n
314
TYR
734
A
HIS
735
n
315
HIS
735
A
HIS
736
n
316
HIS
736
A
GLY
737
n
317
GLY
737
A
GLU
738
n
318
GLU
738
A
GLN
739
n
319
GLN
739
A
SER
740
n
320
SER
740
A
LEU
741
n
321
LEU
741
A
ALA
742
n
322
ALA
742
A
GLN
743
n
323
GLN
743
A
THR
744
n
324
THR
744
A
ILE
745
n
325
ILE
745
A
ILE
746
n
326
ILE
746
A
GLY
747
n
327
GLY
747
A
LEU
748
n
328
LEU
748
A
ALA
749
n
329
ALA
749
A
GLN
750
n
330
GLN
750
A
ASN
751
n
331
ASN
751
A
PHE
752
n
332
PHE
752
A
VAL
753
n
333
VAL
753
A
GLY
754
n
334
GLY
754
A
SER
755
n
335
SER
755
A
ASN
756
n
336
ASN
756
A
ASN
757
n
337
ASN
757
A
ILE
758
n
338
ILE
758
A
TYR
759
n
339
TYR
759
A
LEU
760
n
340
LEU
760
A
LEU
761
n
341
LEU
761
A
LEU
762
n
342
LEU
762
A
PRO
763
n
343
PRO
763
A
ASN
764
n
344
ASN
764
A
GLY
765
n
345
GLY
765
A
ALA
766
n
346
ALA
766
A
PHE
767
n
347
PHE
767
A
GLY
768
n
348
GLY
768
A
THR
769
n
349
THR
769
A
ARG
770
n
350
ARG
770
A
ALA
771
n
351
ALA
771
A
THR
772
n
352
THR
772
A
GLY
773
n
353
GLY
773
A
GLY
774
n
354
GLY
774
A
LYS
775
n
355
LYS
775
A
ASP
776
n
356
ASP
776
A
ALA
777
n
357
ALA
777
A
ALA
778
n
358
ALA
778
A
ALA
779
n
359
ALA
779
A
ALA
780
n
360
ALA
780
A
ARG
781
n
361
ARG
781
A
PTR
782
y
362
PTR
782
A
TYR
782
y
362
TYR
782
A
ILE
783
n
363
ILE
783
A
TYR
784
n
364
TYR
784
A
THR
785
n
365
THR
785
A
GLU
786
n
366
GLU
786
A
LEU
787
n
367
LEU
787
A
ASN
788
n
368
ASN
788
A
LYS
789
n
369
LYS
789
A
LEU
790
n
370
LEU
790
A
THR
791
n
371
THR
791
A
ARG
792
n
372
ARG
792
A
LYS
793
n
373
LYS
793
A
ILE
794
n
374
ILE
794
A
PHE
795
n
375
PHE
795
A
HIS
796
n
376
HIS
796
A
PRO
797
n
377
PRO
797
A
ALA
798
n
378
ALA
798
A
ASP
799
n
379
ASP
799
A
ASP
800
n
380
ASP
800
A
PRO
801
n
381
PRO
801
A
LEU
802
n
382
LEU
802
A
TYR
803
n
383
TYR
803
A
LYS
804
n
384
LYS
804
A
TYR
805
n
385
TYR
805
A
ILE
806
n
386
ILE
806
A
GLN
807
n
387
GLN
807
A
GLU
808
n
388
GLU
808
A
ASP
809
n
389
ASP
809
A
GLU
810
n
390
GLU
810
A
LYS
811
n
391
LYS
811
A
THR
812
n
392
THR
812
A
VAL
813
n
393
VAL
813
A
GLU
814
n
394
GLU
814
A
PRO
815
n
395
PRO
815
A
GLU
816
n
396
GLU
816
A
TRP
817
n
397
TRP
817
A
TYR
818
n
398
TYR
818
A
LEU
819
n
399
LEU
819
A
PRO
820
n
400
PRO
820
A
ILE
821
n
401
ILE
821
A
LEU
822
n
402
LEU
822
A
PRO
823
n
403
PRO
823
A
MET
824
n
404
MET
824
A
ILE
825
n
405
ILE
825
A
LEU
826
n
406
LEU
826
A
VAL
827
n
407
VAL
827
A
ASN
828
n
408
ASN
828
A
GLY
829
n
409
GLY
829
A
ALA
830
n
410
ALA
830
A
GLU
831
n
411
GLU
831
A
GLY
832
n
412
GLY
832
A
ILE
833
n
413
ILE
833
A
GLY
834
n
414
GLY
834
A
THR
835
n
415
THR
835
A
GLY
836
n
416
GLY
836
A
TRP
837
n
417
TRP
837
A
SER
838
n
418
SER
838
A
THR
839
n
419
THR
839
A
TYR
840
n
420
TYR
840
A
ILE
841
n
421
ILE
841
A
PRO
842
n
422
PRO
842
A
PRO
843
n
423
PRO
843
A
PHE
844
n
424
PHE
844
A
ASN
845
n
425
ASN
845
A
PRO
846
n
426
PRO
846
A
LEU
847
n
427
LEU
847
A
GLU
848
n
428
GLU
848
A
ILE
849
n
429
ILE
849
A
ILE
850
n
430
ILE
850
A
LYS
851
n
431
LYS
851
A
ASN
852
n
432
ASN
852
A
ILE
853
n
433
ILE
853
A
ARG
854
n
434
ARG
854
A
HIS
855
n
435
HIS
855
A
LEU
856
n
436
LEU
856
A
MET
857
n
437
MET
857
A
ASN
858
n
438
ASN
858
A
ASP
859
n
439
ASP
859
A
GLU
860
n
440
GLU
860
A
GLU
861
n
441
GLU
861
A
LEU
862
n
442
LEU
862
A
GLU
863
n
443
GLU
863
A
GLN
864
n
444
GLN
864
A
MET
865
n
445
MET
865
A
HIS
866
n
446
HIS
866
A
PRO
867
n
447
PRO
867
A
TRP
868
n
448
TRP
868
A
PHE
869
n
449
PHE
869
A
ARG
870
n
450
ARG
870
A
GLY
871
n
451
GLY
871
A
TRP
872
n
452
TRP
872
A
THR
873
n
453
THR
873
A
GLY
874
n
454
GLY
874
A
THR
875
n
455
THR
875
A
ILE
876
n
456
ILE
876
A
GLU
877
n
457
GLU
877
A
GLU
878
n
458
GLU
878
A
ILE
879
n
459
ILE
879
A
GLU
880
n
460
GLU
880
A
PRO
881
n
461
PRO
881
A
LEU
882
n
462
LEU
882
A
ARG
883
n
463
ARG
883
A
TYR
884
n
464
TYR
884
A
ARG
885
n
465
ARG
885
A
MET
886
n
466
MET
886
A
TYR
887
n
467
TYR
887
A
GLY
888
n
468
GLY
888
A
ARG
889
n
469
ARG
889
A
ILE
890
n
470
ILE
890
A
GLU
891
n
471
GLU
891
A
GLN
892
n
472
GLN
892
A
ILE
893
n
473
ILE
893
A
GLY
894
n
474
GLY
894
A
ASP
895
n
475
ASP
895
A
ASN
896
n
476
ASN
896
A
VAL
897
n
477
VAL
897
A
LEU
898
n
478
LEU
898
A
GLU
899
n
479
GLU
899
A
ILE
900
n
480
ILE
900
A
THR
901
n
481
THR
901
A
GLU
902
n
482
GLU
902
A
LEU
903
n
483
LEU
903
A
PRO
904
n
484
PRO
904
A
ALA
905
n
485
ALA
905
A
ARG
906
n
486
ARG
906
A
THR
907
n
487
THR
907
A
TRP
908
n
488
TRP
908
A
THR
909
n
489
THR
909
A
SER
910
n
490
SER
910
A
THR
911
n
491
THR
911
A
ILE
912
n
492
ILE
912
A
LYS
913
n
493
LYS
913
A
GLU
914
n
494
GLU
914
A
TYR
915
n
495
TYR
915
A
LEU
916
n
496
LEU
916
A
LEU
917
n
497
LEU
917
A
LEU
918
n
498
LEU
918
A
GLY
919
n
499
GLY
919
A
LEU
920
n
500
LEU
920
A
SER
921
n
501
SER
921
A
GLY
922
n
502
GLY
922
A
ASN
923
n
503
ASN
923
A
ASP
924
n
504
ASP
924
A
LYS
925
n
505
LYS
925
A
ILE
926
n
506
ILE
926
A
LYS
927
n
507
LYS
927
A
PRO
928
n
508
PRO
928
A
TRP
929
n
509
TRP
929
A
ILE
930
n
510
ILE
930
A
LYS
931
n
511
LYS
931
A
ASP
932
n
512
ASP
932
A
MET
933
n
513
MET
933
A
GLU
934
n
514
GLU
934
A
GLU
935
n
515
GLU
935
A
GLN
936
n
516
GLN
936
A
HIS
937
n
517
HIS
937
A
ASP
938
n
518
ASP
938
A
ASP
939
n
519
ASP
939
A
ASN
940
n
520
ASN
940
A
ILE
941
n
521
ILE
941
A
LYS
942
n
522
LYS
942
A
PHE
943
n
523
PHE
943
A
ILE
944
n
524
ILE
944
A
ILE
945
n
525
ILE
945
A
THR
946
n
526
THR
946
A
LEU
947
n
527
LEU
947
A
SER
948
n
528
SER
948
A
PRO
949
n
529
PRO
949
A
GLU
950
n
530
GLU
950
A
GLU
951
n
531
GLU
951
A
MET
952
n
532
MET
952
A
ALA
953
n
533
ALA
953
A
LYS
954
n
534
LYS
954
A
THR
955
n
535
THR
955
A
ARG
956
n
536
ARG
956
A
LYS
957
n
537
LYS
957
A
ILE
958
n
538
ILE
958
A
GLY
959
n
539
GLY
959
A
PHE
960
n
540
PHE
960
A
TYR
961
n
541
TYR
961
A
GLU
962
n
542
GLU
962
A
ARG
963
n
543
ARG
963
A
PHE
964
n
544
PHE
964
A
LYS
965
n
545
LYS
965
A
LEU
966
n
546
LEU
966
A
ILE
967
n
547
ILE
967
A
SER
968
n
548
SER
968
A
PRO
969
n
549
PRO
969
A
ILE
970
n
550
ILE
970
A
SER
971
n
551
SER
971
A
LEU
972
n
552
LEU
972
A
MET
973
n
553
MET
973
A
ASN
974
n
554
ASN
974
A
MET
975
n
555
MET
975
A
VAL
976
n
556
VAL
976
A
ALA
977
n
557
ALA
977
A
PHE
978
n
558
PHE
978
A
ASP
979
n
559
ASP
979
A
PRO
980
n
560
PRO
980
A
HIS
981
n
561
HIS
981
A
GLY
982
n
562
GLY
982
A
LYS
983
n
563
LYS
983
A
ILE
984
n
564
ILE
984
A
LYS
985
n
565
LYS
985
A
LYS
986
n
566
LYS
986
A
TYR
987
n
567
TYR
987
A
ASN
988
n
568
ASN
988
A
SER
989
n
569
SER
989
A
VAL
990
n
570
VAL
990
A
ASN
991
n
571
ASN
991
A
GLU
992
n
572
GLU
992
A
ILE
993
n
573
ILE
993
A
LEU
994
n
574
LEU
994
A
SER
995
n
575
SER
995
A
GLU
996
n
576
GLU
996
A
PHE
997
n
577
PHE
997
A
TYR
998
n
578
TYR
998
A
TYR
999
n
579
TYR
999
A
VAL
1000
n
580
VAL
1000
A
ARG
1001
n
581
ARG
1001
A
LEU
1002
n
582
LEU
1002
A
GLU
1003
n
583
GLU
1003
A
TYR
1004
n
584
TYR
1004
A
TYR
1005
n
585
TYR
1005
A
GLN
1006
n
586
GLN
1006
A
LYS
1007
n
587
LYS
1007
A
ARG
1008
n
588
ARG
1008
A
LYS
1009
n
589
LYS
1009
A
ASP
1010
n
590
ASP
1010
A
HIS
1011
n
591
HIS
1011
A
MET
1012
n
592
MET
1012
A
SER
1013
n
593
SER
1013
A
GLU
1014
n
594
GLU
1014
A
ARG
1015
n
595
ARG
1015
A
LEU
1016
n
596
LEU
1016
A
GLN
1017
n
597
GLN
1017
A
TRP
1018
n
598
TRP
1018
A
GLU
1019
n
599
GLU
1019
A
VAL
1020
n
600
VAL
1020
A
GLU
1021
n
601
GLU
1021
A
LYS
1022
n
602
LYS
1022
A
TYR
1023
n
603
TYR
1023
A
SER
1024
n
604
SER
1024
A
PHE
1025
n
605
PHE
1025
A
GLN
1026
n
606
GLN
1026
A
VAL
1027
n
607
VAL
1027
A
LYS
1028
n
608
LYS
1028
A
PHE
1029
n
609
PHE
1029
A
ILE
1030
n
610
ILE
1030
A
LYS
1031
n
611
LYS
1031
A
MET
1032
n
612
MET
1032
A
ILE
1033
n
613
ILE
1033
A
ILE
1034
n
614
ILE
1034
A
GLU
1035
n
615
GLU
1035
A
LYS
1036
n
616
LYS
1036
A
GLU
1037
n
617
GLU
1037
A
LEU
1038
n
618
LEU
1038
A
THR
1039
n
619
THR
1039
A
VAL
1040
n
620
VAL
1040
A
THR
1041
n
621
THR
1041
A
ASN
1042
n
622
ASN
1042
A
LYS
1043
n
623
LYS
1043
A
PRO
1044
n
624
PRO
1044
A
ARG
1045
n
625
ARG
1045
A
ASN
1046
n
626
ASN
1046
A
ALA
1047
n
627
ALA
1047
A
ILE
1048
n
628
ILE
1048
A
ILE
1049
n
629
ILE
1049
A
GLN
1050
n
630
GLN
1050
A
GLU
1051
n
631
GLU
1051
A
LEU
1052
n
632
LEU
1052
A
GLU
1053
n
633
GLU
1053
A
ASN
1054
n
634
ASN
1054
A
LEU
1055
n
635
LEU
1055
A
GLY
1056
n
636
GLY
1056
A
PHE
1057
n
637
PHE
1057
A
PRO
1058
n
638
PRO
1058
A
ARG
1059
n
639
ARG
1059
A
PHE
1060
n
640
PHE
1060
A
ASN
1061
n
641
ASN
1061
A
LYS
1062
n
642
LYS
1062
A
GLU
1063
n
643
GLU
1063
A
GLY
1064
n
644
GLY
1064
A
LYS
1065
n
645
LYS
1065
A
PRO
1066
n
646
PRO
1066
A
TYR
1067
n
647
TYR
1067
A
TYR
1068
n
648
TYR
1068
A
GLY
1069
n
649
GLY
1069
A
SER
1070
n
650
SER
1070
A
n
651
1071
A
n
652
1072
A
n
653
1073
A
n
654
1074
A
n
655
1075
A
n
656
1076
A
n
657
1077
A
n
658
1078
A
n
659
1079
A
n
660
1080
A
n
661
1081
A
n
662
1082
A
n
663
1083
A
n
664
1084
A
n
665
1085
A
n
666
1086
A
n
667
1087
A
n
668
1088
A
n
669
1089
A
n
670
1090
A
n
671
1091
A
n
672
1092
A
n
673
1093
A
n
674
1094
A
n
675
1095
A
n
676
1096
A
n
677
1097
A
n
678
1098
A
n
679
1099
A
n
680
1100
A
n
681
1101
A
n
682
1102
A
n
683
1103
A
n
684
1104
A
n
685
1105
A
n
686
1106
A
GLU
1107
n
687
GLU
1107
A
GLU
1108
n
688
GLU
1108
A
LEU
1109
n
689
LEU
1109
A
TYR
1110
n
690
TYR
1110
A
GLY
1111
n
691
GLY
1111
A
THR
1112
n
692
THR
1112
A
TYR
1113
n
693
TYR
1113
A
GLU
1114
n
694
GLU
1114
A
TYR
1115
n
695
TYR
1115
A
LEU
1116
n
696
LEU
1116
A
LEU
1117
n
697
LEU
1117
A
GLY
1118
n
698
GLY
1118
A
MET
1119
n
699
MET
1119
A
ARG
1120
n
700
ARG
1120
A
ILE
1121
n
701
ILE
1121
A
TRP
1122
n
702
TRP
1122
A
SER
1123
n
703
SER
1123
A
LEU
1124
n
704
LEU
1124
A
THR
1125
n
705
THR
1125
A
LYS
1126
n
706
LYS
1126
A
GLU
1127
n
707
GLU
1127
A
ARG
1128
n
708
ARG
1128
A
TYR
1129
n
709
TYR
1129
A
GLN
1130
n
710
GLN
1130
A
LYS
1131
n
711
LYS
1131
A
LEU
1132
n
712
LEU
1132
A
LEU
1133
n
713
LEU
1133
A
LYS
1134
n
714
LYS
1134
A
GLN
1135
n
715
GLN
1135
A
LYS
1136
n
716
LYS
1136
A
GLN
1137
n
717
GLN
1137
A
GLU
1138
n
718
GLU
1138
A
LYS
1139
n
719
LYS
1139
A
GLU
1140
n
720
GLU
1140
A
THR
1141
n
721
THR
1141
A
GLU
1142
n
722
GLU
1142
A
LEU
1143
n
723
LEU
1143
A
GLU
1144
n
724
GLU
1144
A
ASN
1145
n
725
ASN
1145
A
LEU
1146
n
726
LEU
1146
A
LEU
1147
n
727
LEU
1147
A
LYS
1148
n
728
LYS
1148
A
LEU
1149
n
729
LEU
1149
A
SER
1150
n
730
SER
1150
A
ALA
1151
n
731
ALA
1151
A
LYS
1152
n
732
LYS
1152
A
ASP
1153
n
733
ASP
1153
A
ILE
1154
n
734
ILE
1154
A
TRP
1155
n
735
TRP
1155
A
ASN
1156
n
736
ASN
1156
A
THR
1157
n
737
THR
1157
A
ASP
1158
n
738
ASP
1158
A
LEU
1159
n
739
LEU
1159
A
LYS
1160
n
740
LYS
1160
A
ALA
1161
n
741
ALA
1161
A
PHE
1162
n
742
PHE
1162
A
GLU
1163
n
743
GLU
1163
A
VAL
1164
n
744
VAL
1164
A
GLY
1165
n
745
GLY
1165
A
TYR
1166
n
746
TYR
1166
A
GLN
1167
n
747
GLN
1167
A
GLU
1168
n
748
GLU
1168
A
PHE
1169
n
749
PHE
1169
A
LEU
1170
n
750
LEU
1170
A
GLN
1171
n
751
GLN
1171
A
ARG
1172
n
752
ARG
1172
A
ASP
1173
n
753
ASP
1173
A
ALA
1174
n
754
ALA
1174
A
GLU
1175
n
755
GLU
1175
A
ALA
1176
n
756
ALA
1176
A
ARG
1177
n
757
ARG
1177
A
DC
1
n
1
DC
1
B
DC
2
n
2
DC
2
B
DT
3
n
3
DT
3
B
DA
4
n
4
DA
4
B
DC
5
n
5
DC
5
B
DT
6
n
6
DT
6
B
DG
7
n
7
DG
7
B
DC
8
n
8
DC
8
B
DT
9
n
9
DT
9
B
DA
10
n
10
DA
10
B
DC
11
n
11
DC
11
B
DC
1
n
1
DC
1
C
DG
2
n
2
DG
2
C
DC
3
n
3
DC
3
C
DG
4
n
4
DG
4
C
DG
5
n
5
DG
5
C
DT
6
n
6
DT
6
C
DA
7
n
7
DA
7
C
DG
8
n
8
DG
8
C
DC
9
n
9
DC
9
C
DA
10
n
10
DA
10
C
DG
11
n
11
DG
11
C
DT
12
n
12
DT
12
C
DA
13
n
13
DA
13
C
DG
14
n
14
DG
14
C
DG
15
n
15
DG
15
C
DG
1
n
1
DG
1
D
DG
2
n
2
DG
2
D
DA
3
n
3
DA
3
D
DT
4
n
4
DT
4
D
DG
5
n
5
DG
5
D
DA
6
n
6
DA
6
D
DC
7
n
7
DC
7
D
DG
8
n
8
DG
8
D
DA
9
n
9
DA
9
D
DT
10
n
10
DT
10
D
DC
1
n
1
DC
1
E
DG
2
n
2
DG
2
E
DC
3
n
3
DC
3
E
DG
4
n
4
DG
4
E
DA
5
n
5
DA
5
E
DA
6
n
6
DA
6
E
DT
7
n
7
DT
7
E
DC
8
n
8
DC
8
E
DG
9
n
9
DG
9
E
DT
10
n
10
DT
10
E
DC
11
n
11
DC
11
E
DA
12
n
12
DA
12
E
DT
13
n
13
DT
13
E
DC
14
n
14
DC
14
E
DC
15
n
15
DC
15
E
author_defined_assembly
5
pentameric
A
HIS
735
A
NE2
HIS
315
1_555
A
ZN
1
F
ZN
ZN
1_555
A
GLU
808
A
OE2
GLU
388
1_555
99.1
A
GLU
449
A
OE2
GLU
29
1_555
A
ZN
3
G
ZN
ZN
1_555
A
ASP
526
A
OD2
ASP
106
1_555
60.1
A
GLU
449
A
OE2
GLU
29
1_555
A
ZN
3
G
ZN
ZN
1_555
B
DC
11
A
B
O3'
DC
11
1_555
122.8
A
ASP
526
A
OD2
ASP
106
1_555
A
ZN
3
G
ZN
ZN
1_555
B
DC
11
A
B
O3'
DC
11
1_555
138.3
A
GLU
449
A
OE2
GLU
29
1_555
A
ZN
3
G
ZN
ZN
1_555
D
TSP
11
B
M
S3'
TSP
1_555
127.8
A
ASP
526
A
OD2
ASP
106
1_555
A
ZN
3
G
ZN
ZN
1_555
D
TSP
11
B
M
S3'
TSP
1_555
137.3
B
DC
11
A
B
O3'
DC
11
1_555
A
ZN
3
G
ZN
ZN
1_555
D
TSP
11
B
M
S3'
TSP
1_555
5.3
A
ASP
526
A
OD2
ASP
106
1_555
A
ZN
4
H
ZN
ZN
1_555
A
ASP
528
A
OD2
ASP
108
1_555
97.9
C
DG
4
A
C
N7
DG
4
1_555
E
ZN
16
N
ZN
ZN
1_555
E
DG
4
B
E
N7
DG
4
1_555
2.9
A
PTR
782
O-PHOSPHOTYROSINE
A
PTR
362
TYR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
470
A
O
GLY
50
A
N
VAL
446
A
N
VAL
26
A
N
LEU
447
A
N
LEU
27
A
O
MET
522
A
O
MET
102
A
N
LEU
521
A
N
LEU
101
A
O
LEU
557
A
O
LEU
137
A
N
GLU
558
A
N
GLU
138
A
O
LYS
625
A
O
LYS
205
A
N
ILE
626
A
N
ILE
206
A
O
ILE
670
A
O
ILE
250
A
O
ILE
576
A
O
ILE
156
A
N
VAL
566
A
N
VAL
146
A
N
SER
567
A
N
SER
147
A
O
LYS
598
A
O
LYS
178
A
N
LEU
719
A
N
LEU
299
A
O
THR
785
A
O
THR
365
A
N
ILE
806
A
N
ILE
386
A
O
VAL
813
A
O
VAL
393
A
N
ALA
830
A
N
ALA
410
A
O
ILE
841
A
O
ILE
421
A
N
THR
875
A
N
THR
455
A
O
TYR
887
A
O
TYR
467
A
N
MET
886
A
N
MET
466
A
O
SER
968
A
O
SER
548
A
N
GLU
891
A
N
GLU
471
A
O
GLU
899
A
O
GLU
479
A
N
LEU
898
A
N
LEU
478
A
O
ILE
945
A
O
ILE
525
A
O
THR
946
A
O
THR
526
A
N
ASP
932
A
N
ASP
512
A
N
MET
975
A
N
MET
555
A
O
TYR
987
A
O
TYR
567
A
N
ARG
1059
A
N
ARG
639
A
O
TYR
1067
A
O
TYR
647
1
A
HOH
116
O
HOH
1
C
O5'
DC
1
C
O5'
DC
1
1
Y
1
D
OP3
TSP
11
M
OP3
TSP
1
1
N
1
A
PRO
1071
A
PRO
651
1
Y
1
A
ASN
1072
A
ASN
652
1
Y
1
A
ASP
1073
A
ASP
653
1
Y
1
A
GLU
1074
A
GLU
654
1
Y
1
A
ILE
1075
A
ILE
655
1
Y
1
A
ALA
1076
A
ALA
656
1
Y
1
A
GLU
1077
A
GLU
657
1
Y
1
A
GLN
1078
A
GLN
658
1
Y
1
A
ILE
1079
A
ILE
659
1
Y
1
A
ASN
1080
A
ASN
660
1
Y
1
A
ASP
1081
A
ASP
661
1
Y
1
A
VAL
1082
A
VAL
662
1
Y
1
A
LYS
1083
A
LYS
663
1
Y
1
A
GLY
1084
A
GLY
664
1
Y
1
A
ALA
1085
A
ALA
665
1
Y
1
A
THR
1086
A
THR
666
1
Y
1
A
SER
1087
A
SER
667
1
Y
1
A
ASP
1088
A
ASP
668
1
Y
1
A
GLU
1089
A
GLU
669
1
Y
1
A
GLU
1090
A
GLU
670
1
Y
1
A
ASP
1091
A
ASP
671
1
Y
1
A
GLU
1092
A
GLU
672
1
Y
1
A
GLU
1093
A
GLU
673
1
Y
1
A
SER
1094
A
SER
674
1
Y
1
A
SER
1095
A
SER
675
1
Y
1
A
HIS
1096
A
HIS
676
1
Y
1
A
GLU
1097
A
GLU
677
1
Y
1
A
ASP
1098
A
ASP
678
1
Y
1
A
THR
1099
A
THR
679
1
Y
1
A
GLU
1100
A
GLU
680
1
Y
1
A
ASN
1101
A
ASN
681
1
Y
1
A
VAL
1102
A
VAL
682
1
Y
1
A
ILE
1103
A
ILE
683
1
Y
1
A
ASN
1104
A
ASN
684
1
Y
1
A
GLY
1105
A
GLY
685
1
Y
1
A
PRO
1106
A
PRO
686
1
Y
1
17.20
2.60
112.10
129.30
A
A
A
N
CA
C
PRO
PRO
PRO
571
571
571
N
1
13.25
1.90
110.30
123.55
A
A
A
N
CA
CB
THR
THR
THR
572
572
572
N
1
-7.43
0.90
105.70
98.27
B
B
B
O5'
P
OP2
DC
DC
DC
2
2
2
A
A
A
N
1
13.93
1.20
110.70
124.63
B
B
B
O5'
P
OP1
DT
DT
DT
6
6
6
A
A
A
N
1
-18.87
0.90
105.70
86.83
B
B
B
O5'
P
OP2
DT
DT
DT
6
6
6
A
A
A
N
1
-2.47
0.40
104.50
102.03
B
B
B
O4'
C4'
C3'
DA
DA
DA
10
10
10
A
A
A
N
1
2.06
0.30
108.30
110.36
B
B
B
O4'
C1'
N9
DA
DA
DA
10
10
10
A
A
A
N
1
2.37
0.30
108.30
110.67
C
C
C
O4'
C1'
N1
DC
DC
DC
1
1
1
A
A
A
N
1
-19.94
2.20
105.20
85.26
D
D
D
O3'
P
OP2
DG
DG
DG
1
2
2
B
B
B
Y
1
7.83
1.10
110.50
118.33
D
D
D
O3'
P
OP1
DG
DG
DG
1
2
2
B
B
B
Y
1
12.25
1.10
110.50
122.75
D
D
D
O3'
P
OP2
DG
DA
DA
5
6
6
B
B
B
Y
1
14.43
1.20
110.70
125.13
D
D
D
O5'
P
OP1
DA
DA
DA
6
6
6
B
B
B
N
1
-18.47
0.90
105.70
87.23
D
D
D
O5'
P
OP2
DA
DA
DA
6
6
6
B
B
B
N
1
25.94
2.50
111.00
136.94
D
D
D
O5'
C5'
C4'
DA
DA
DA
6
6
6
B
B
B
N
1
-3.22
0.40
104.50
101.28
D
D
D
O4'
C4'
C3'
DT
DT
DT
10
10
10
B
B
B
N
1
3.49
0.30
108.30
111.79
D
D
D
O4'
C1'
N1
DT
DT
DT
10
10
10
B
B
B
N
1
A
A
CD
N
PRO
PRO
571
571
-0.088
0.014
1.474
1.386
N
1
A
A
C
N
ARG
PTR
781
782
0.218
0.023
1.336
1.554
A
Y
1
B
B
P
OP2
DC
DC
2
2
-0.210
0.017
1.485
1.275
A
A
N
1
C
C
O3'
P
DC
DG
1
2
-0.140
0.012
1.607
1.467
A
A
Y
1
D
D
P
OP2
DA
DA
6
6
-0.131
0.017
1.485
1.354
B
B
N
1
A
VAL
481
-69.42
1.30
1
A
LYS
508
58.92
-139.93
1
A
GLN
527
86.95
15.75
1
A
THR
572
-162.30
116.61
1
A
GLU
591
-130.88
-31.52
1
A
LEU
605
85.22
-5.75
1
A
SER
608
-37.78
125.51
1
A
LYS
644
-61.66
3.52
1
A
LYS
668
86.86
8.13
1
A
GLU
679
-123.91
-60.19
1
A
SER
755
-110.59
-154.10
1
A
LYS
811
-170.67
141.71
1
A
VAL
813
-120.77
-152.37
1
A
LEU
882
80.82
10.72
1
A
ASP
895
-57.20
109.47
1
A
ASP
938
-109.47
-89.07
1
A
LYS
1036
86.59
15.42
1
A
ASN
1042
63.86
-146.03
1
A
LYS
1043
59.81
107.29
89.9
-8.8659
0.0000
0.0000
14.0089
0.0000
-5.1430
THE FRIEDEL PAIRS WERE USED FOR PHASING
0.2733
0.2391
0.2408
2.98
49.023
1549
17619
4.97
86.23
0.42
IMPORTED FROM PDB ENTRY 3L4J
1
1.90
MOLECULAR REPLACEMENT
0.90
1.11
PDB entry 2RGR
ML
FLAT BULK SOLVENT MODEL
30.228
0.266
2.98
49.023
20
7028
28
1039
5941
0.008
7257
1.250
10013
18.072
2802
0.103
1079
0.007
1096
0.3943
0.3373
3.0795
127
2722
2849
86.00
0.3650
0.3301
3.1895
129
2740
2869
88.00
0.3980
0.3276
3.3172
153
2710
2863
88.00
0.3261
0.2990
3.4682
171
2705
2876
87.00
0.3470
0.2725
3.6510
143
2706
2849
87.00
0.2904
0.2549
3.8796
157
2716
2873
87.00
0.2826
0.2291
4.1790
137
2687
2824
86.00
0.2457
0.1971
4.5993
139
2660
2799
85.00
0.1875
0.1961
5.2641
132
2659
2791
85.00
0.2677
0.2130
6.6297
113
2683
2796
85.00
0.2090
0.1935
49.0292
148
2643
2791
85.00
72.6
2.98
50.0
3L4K
19750
18071
0
0
0.102
1
10.6
4.3
91.4
0.538
2.98
3.07
2.1
1827
4.4
94.0
data collection
Blu-Ice
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.5_2)
data reduction
HKL-2000
data scaling
HKL-2000
Topoisomerase II-DNA cleavage complex, metal-bound
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
7
N
N
6
N
N
8
N
N
8
N
N
8
N
N
A
GLY
450
A
GLY
30
HELX_P
A
GLY
465
A
GLY
45
1
1
16
A
SER
485
A
SER
65
HELX_P
A
ASN
492
A
ASN
72
1
2
8
A
ASN
492
A
ASN
72
HELX_P
A
GLY
503
A
GLY
83
1
3
12
A
ASP
512
A
ASP
92
HELX_P
A
LEU
516
A
LEU
96
5
4
5
A
ASP
528
A
ASP
108
HELX_P
A
PHE
546
A
PHE
126
1
5
19
A
ASN
580
A
ASN
160
HELX_P
A
GLU
591
A
GLU
171
1
6
12
A
SER
592
A
SER
172
HELX_P
A
PHE
595
A
PHE
175
5
7
4
A
VAL
613
A
VAL
193
HELX_P
A
ASN
619
A
ASN
199
1
8
7
A
LEU
620
A
LEU
200
HELX_P
A
ARG
622
A
ARG
202
5
9
3
A
ASN
633
A
ASN
213
HELX_P
A
SER
643
A
SER
223
1
10
11
A
LYS
646
A
LYS
226
HELX_P
A
TYR
657
A
TYR
237
1
11
12
A
ILE
672
A
ILE
252
HELX_P
A
ASN
677
A
ASN
257
1
12
6
A
GLU
679
A
GLU
259
HELX_P
A
ILE
692
A
ILE
272
1
13
14
A
LYS
700
A
LYS
280
HELX_P
A
LYS
713
A
LYS
293
1
14
14
A
VAL
721
A
VAL
301
HELX_P
A
THR
732
A
THR
312
1
15
12
A
GLY
737
A
GLY
317
HELX_P
A
GLN
750
A
GLN
330
1
16
14
A
LEU
790
A
LEU
370
HELX_P
A
PHE
795
A
PHE
375
1
17
6
A
HIS
796
A
HIS
376
HELX_P
A
TYR
803
A
TYR
383
5
18
8
A
PRO
823
A
PRO
403
HELX_P
A
GLY
829
A
GLY
409
1
19
7
A
ASN
845
A
ASN
425
HELX_P
A
ASN
858
A
ASN
438
1
20
14
A
TRP
908
A
TRP
488
HELX_P
A
GLY
922
A
GLY
502
1
21
15
A
SER
948
A
SER
528
HELX_P
A
GLY
959
A
GLY
539
1
22
12
A
GLY
959
A
GLY
539
HELX_P
A
PHE
964
A
PHE
544
1
23
6
A
SER
989
A
SER
569
HELX_P
A
LYS
1036
A
LYS
616
1
24
48
A
PRO
1044
A
PRO
624
HELX_P
A
LEU
1055
A
LEU
635
1
25
12
A
TYR
1113
A
TYR
693
HELX_P
A
GLY
1118
A
GLY
698
1
26
6
A
ARG
1120
A
ARG
700
HELX_P
A
LEU
1124
A
LEU
704
5
27
5
A
THR
1125
A
THR
705
HELX_P
A
LYS
1148
A
LYS
728
1
28
24
A
SER
1150
A
SER
730
HELX_P
A
ALA
1176
A
ALA
756
1
29
27
covale
1.554
both
A
A
ARG
781
A
C
ARG
361
1_555
A
PTR
782
A
N
PTR
362
1_555
covale
1.414
both
A
A
PTR
782
A
C
PTR
362
1_555
A
ILE
783
A
N
ILE
363
1_555
metalc
1.936
A
ZN
1
F
ZN
ZN
1_555
A
HIS
735
A
NE2
HIS
315
1_555
metalc
2.068
A
ZN
1
F
ZN
ZN
1_555
A
GLU
808
A
OE2
GLU
388
1_555
metalc
2.691
A
ZN
3
G
ZN
ZN
1_555
A
GLU
449
A
OE2
GLU
29
1_555
metalc
2.218
A
ZN
3
G
ZN
ZN
1_555
A
ASP
526
A
OD2
ASP
106
1_555
metalc
2.080
A
A
ZN
3
G
ZN
ZN
1_555
B
DC
11
B
O3'
DC
11
1_555
metalc
2.049
B
A
ZN
3
G
ZN
ZN
1_555
D
TSP
11
M
S3'
TSP
1_555
metalc
2.300
A
ZN
4
H
ZN
ZN
1_555
A
ASP
526
A
OD2
ASP
106
1_555
metalc
2.115
A
ZN
4
H
ZN
ZN
1_555
A
ASP
528
A
OD2
ASP
108
1_555
metalc
2.362
A
ZN
5
I
ZN
ZN
1_555
A
HIS
981
A
NE2
HIS
561
1_555
metalc
2.457
A
ZN
6
J
ZN
ZN
1_555
A
HIS
623
A
NE2
HIS
203
1_555
metalc
2.654
A
ZN
7
K
ZN
ZN
1_555
A
HIS
628
A
NE2
HIS
208
1_555
metalc
2.501
A
ZN
8
L
ZN
ZN
1_555
A
HIS
736
A
NE2
HIS
316
1_555
metalc
1.956
A
C
DG
4
C
N7
DG
4
1_555
E
ZN
16
N
ZN
ZN
1_555
metalc
1.923
B
E
DG
4
E
N7
DG
4
1_555
E
ZN
16
N
ZN
ZN
1_555
hydrog
WATSON-CRICK
A
A
B
DC
1
B
N3
DC
1
1_555
C
DG
15
C
N1
DG
15
1_555
hydrog
WATSON-CRICK
A
A
B
DC
1
B
N4
DC
1
1_555
C
DG
15
C
O6
DG
15
1_555
hydrog
WATSON-CRICK
A
A
B
DC
1
B
O2
DC
1
1_555
C
DG
15
C
N2
DG
15
1_555
hydrog
WATSON-CRICK
A
A
B
DC
2
B
N3
DC
2
1_555
C
DG
14
C
N1
DG
14
1_555
hydrog
WATSON-CRICK
A
A
B
DC
2
B
N4
DC
2
1_555
C
DG
14
C
O6
DG
14
1_555
hydrog
WATSON-CRICK
A
A
B
DC
2
B
O2
DC
2
1_555
C
DG
14
C
N2
DG
14
1_555
hydrog
WATSON-CRICK
A
A
B
DT
3
B
N3
DT
3
1_555
C
DA
13
C
N1
DA
13
1_555
hydrog
WATSON-CRICK
A
A
B
DT
3
B
O4
DT
3
1_555
C
DA
13
C
N6
DA
13
1_555
hydrog
WATSON-CRICK
A
A
B
DA
4
B
N1
DA
4
1_555
C
DT
12
C
N3
DT
12
1_555
hydrog
WATSON-CRICK
A
A
B
DA
4
B
N6
DA
4
1_555
C
DT
12
C
O4
DT
12
1_555
hydrog
WATSON-CRICK
A
A
B
DC
5
B
N3
DC
5
1_555
C
DG
11
C
N1
DG
11
1_555
hydrog
WATSON-CRICK
A
A
B
DC
5
B
N4
DC
5
1_555
C
DG
11
C
O6
DG
11
1_555
hydrog
WATSON-CRICK
A
A
B
DC
5
B
O2
DC
5
1_555
C
DG
11
C
N2
DG
11
1_555
hydrog
WATSON-CRICK
A
A
B
DT
6
B
N3
DT
6
1_555
C
DA
10
C
N1
DA
10
1_555
hydrog
WATSON-CRICK
A
A
B
DT
6
B
O4
DT
6
1_555
C
DA
10
C
N6
DA
10
1_555
hydrog
WATSON-CRICK
A
A
B
DG
7
B
N1
DG
7
1_555
C
DC
9
C
N3
DC
9
1_555
hydrog
WATSON-CRICK
A
A
B
DG
7
B
N2
DG
7
1_555
C
DC
9
C
O2
DC
9
1_555
hydrog
WATSON-CRICK
A
A
B
DG
7
B
O6
DG
7
1_555
C
DC
9
C
N4
DC
9
1_555
hydrog
WATSON-CRICK
A
A
B
DC
8
B
N3
DC
8
1_555
C
DG
8
C
N1
DG
8
1_555
hydrog
WATSON-CRICK
A
A
B
DC
8
B
N4
DC
8
1_555
C
DG
8
C
O6
DG
8
1_555
hydrog
WATSON-CRICK
A
A
B
DC
8
B
O2
DC
8
1_555
C
DG
8
C
N2
DG
8
1_555
hydrog
WATSON-CRICK
A
A
B
DT
9
B
N3
DT
9
1_555
C
DA
7
C
N1
DA
7
1_555
hydrog
WATSON-CRICK
A
A
B
DT
9
B
O4
DT
9
1_555
C
DA
7
C
N6
DA
7
1_555
hydrog
DA-DT PAIR
A
A
B
DA
10
B
N1
DA
10
1_555
C
DT
6
C
N3
DT
6
1_555
hydrog
DC-DG PAIR
A
A
B
DC
11
B
O2
DC
11
1_555
C
DG
5
C
N2
DG
5
1_555
hydrog
WATSON-CRICK
B
B
D
DG
1
D
N1
DG
1
1_555
E
DC
15
E
N3
DC
15
1_555
hydrog
WATSON-CRICK
B
B
D
DG
1
D
N2
DG
1
1_555
E
DC
15
E
O2
DC
15
1_555
hydrog
WATSON-CRICK
B
B
D
DG
1
D
O6
DG
1
1_555
E
DC
15
E
N4
DC
15
1_555
hydrog
WATSON-CRICK
B
B
D
DG
2
D
N1
DG
2
1_555
E
DC
14
E
N3
DC
14
1_555
hydrog
WATSON-CRICK
B
B
D
DG
2
D
N2
DG
2
1_555
E
DC
14
E
O2
DC
14
1_555
hydrog
WATSON-CRICK
B
B
D
DG
2
D
O6
DG
2
1_555
E
DC
14
E
N4
DC
14
1_555
hydrog
WATSON-CRICK
B
B
D
DA
3
D
N1
DA
3
1_555
E
DT
13
E
N3
DT
13
1_555
hydrog
WATSON-CRICK
B
B
D
DA
3
D
N6
DA
3
1_555
E
DT
13
E
O4
DT
13
1_555
hydrog
WATSON-CRICK
B
B
D
DT
4
D
N3
DT
4
1_555
E
DA
12
E
N1
DA
12
1_555
hydrog
WATSON-CRICK
B
B
D
DT
4
D
O4
DT
4
1_555
E
DA
12
E
N6
DA
12
1_555
hydrog
WATSON-CRICK
B
B
D
DG
5
D
N1
DG
5
1_555
E
DC
11
E
N3
DC
11
1_555
hydrog
WATSON-CRICK
B
B
D
DG
5
D
N2
DG
5
1_555
E
DC
11
E
O2
DC
11
1_555
hydrog
WATSON-CRICK
B
B
D
DG
5
D
O6
DG
5
1_555
E
DC
11
E
N4
DC
11
1_555
hydrog
WATSON-CRICK
B
B
D
DA
6
D
N1
DA
6
1_555
E
DT
10
E
N3
DT
10
1_555
hydrog
WATSON-CRICK
B
B
D
DA
6
D
N6
DA
6
1_555
E
DT
10
E
O4
DT
10
1_555
hydrog
WATSON-CRICK
B
B
D
DC
7
D
N3
DC
7
1_555
E
DG
9
E
N1
DG
9
1_555
hydrog
WATSON-CRICK
B
B
D
DC
7
D
N4
DC
7
1_555
E
DG
9
E
O6
DG
9
1_555
hydrog
WATSON-CRICK
B
B
D
DC
7
D
O2
DC
7
1_555
E
DG
9
E
N2
DG
9
1_555
hydrog
WATSON-CRICK
B
B
D
DG
8
D
N1
DG
8
1_555
E
DC
8
E
N3
DC
8
1_555
hydrog
WATSON-CRICK
B
B
D
DG
8
D
N2
DG
8
1_555
E
DC
8
E
O2
DC
8
1_555
hydrog
WATSON-CRICK
B
B
D
DG
8
D
O6
DG
8
1_555
E
DC
8
E
N4
DC
8
1_555
hydrog
WATSON-CRICK
B
B
D
DA
9
D
N1
DA
9
1_555
E
DT
7
E
N3
DT
7
1_555
hydrog
WATSON-CRICK
B
B
D
DA
9
D
N6
DA
9
1_555
E
DT
7
E
O4
DT
7
1_555
hydrog
WATSON-CRICK
B
B
D
DT
10
D
N3
DT
10
1_555
E
DA
6
E
N1
DA
6
1_555
hydrog
WATSON-CRICK
B
B
D
DT
10
D
O4
DT
10
1_555
E
DA
6
E
N6
DA
6
1_555
Isomerase/DNA
TOPOISOMERASE, PROTEIN-DNA COMPLEX, COVALENTLY LINKED COMPLEX, DNA SUPERCOILING, DNA REPLICATION, ATP-binding, DNA-binding, Isomerase, Nucleotide-binding, Nucleus, Phosphoprotein, Isomerase-DNA complex
TOP2_YEAST
UNP
1
421
P06786
SRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQILKNAEIQAIKK
IMGLQHRKKYEDTKSLRYGHLMIMTDQDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN
MPDYEKWREEESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWLRQYEPG
TVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQS
LAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYLP
ILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEIEPLRYRMYGRIEQIGDNVLEI
TELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHDDNIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDP
HGKIKKYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELENLGFPRF
NKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKE
TELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEAR
3L4K
PDB
2
3L4K
CCTACTGCTAC
3L4K
PDB
3
3L4K
CGCGGTAGCAGTAGG
3L4K
PDB
4
3L4K
GGATGACGAT
3L4K
PDB
5
3L4K
CGCGAATCGTCATCC
421
1177
3L4K
421
1177
P06786
A
1
1
757
1
11
3L4K
1
11
3L4K
B
2
1
11
1
15
3L4K
1
15
3L4K
C
3
1
15
1
10
3L4K
1
10
3L4K
D
4
1
10
1
15
3L4K
1
15
3L4K
E
5
1
15
1
TYR
microheterogeneity
PTR
782
3L4K
A
P06786
UNP
782
362
6
3
2
2
2
3
4
2
2
parallel
parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
469
A
TYR
49
A
LEU
474
A
LEU
54
A
THR
444
A
THR
24
A
GLU
449
A
GLU
29
A
HIS
520
A
HIS
100
A
MET
524
A
MET
104
A
LEU
556
A
LEU
136
A
PHE
559
A
PHE
139
A
LEU
624
A
LEU
204
A
PHE
627
A
PHE
207
A
GLU
669
A
GLU
249
A
ILE
670
A
ILE
250
A
THR
575
A
THR
155
A
PHE
578
A
PHE
158
A
ILE
564
A
ILE
144
A
ILE
568
A
ILE
148
A
TRP
597
A
TRP
177
A
TYR
601
A
TYR
181
A
LEU
719
A
LEU
299
A
LYS
720
A
LYS
300
A
TYR
784
A
TYR
364
A
THR
785
A
THR
365
A
TYR
805
A
TYR
385
A
GLN
807
A
GLN
387
A
THR
812
A
THR
392
A
PRO
815
A
PRO
395
A
ALA
830
A
ALA
410
A
ILE
833
A
ILE
413
A
SER
838
A
SER
418
A
ILE
841
A
ILE
421
A
THR
875
A
THR
455
A
GLU
878
A
GLU
458
A
ARG
883
A
ARG
463
A
TYR
887
A
TYR
467
A
ILE
967
A
ILE
547
A
SER
971
A
SER
551
A
ARG
889
A
ARG
469
A
GLY
894
A
GLY
474
A
VAL
897
A
VAL
477
A
GLU
902
A
GLU
482
A
PHE
943
A
PHE
523
A
THR
946
A
THR
526
A
ASP
932
A
ASP
512
A
GLU
935
A
GLU
515
A
MET
975
A
MET
555
A
PHE
978
A
PHE
558
A
ILE
984
A
ILE
564
A
TYR
987
A
TYR
567
A
ARG
1059
A
ARG
639
A
PHE
1060
A
PHE
640
A
PRO
1066
A
PRO
646
A
TYR
1067
A
TYR
647
BINDING SITE FOR RESIDUE ZN A 1
A
ZN
1
Software
3
BINDING SITE FOR RESIDUE ZN A 3
A
ZN
3
Software
6
BINDING SITE FOR RESIDUE ZN A 4
A
ZN
4
Software
4
BINDING SITE FOR RESIDUE ZN A 5
A
ZN
5
Software
2
BINDING SITE FOR RESIDUE ZN A 6
A
ZN
6
Software
3
BINDING SITE FOR RESIDUE ZN A 7
A
ZN
7
Software
3
BINDING SITE FOR RESIDUE ZN A 8
A
ZN
8
Software
1
BINDING SITE FOR RESIDUE TSP D 11
D
TSP
11
Software
14
BINDING SITE FOR RESIDUE ZN E 16
E
ZN
16
Software
2
A
HIS
735
A
HIS
315
3
1_555
A
GLU
808
A
GLU
388
3
1_555
A
ASP
809
A
ASP
389
3
1_555
A
ZN
4
H
ZN
6
1_555
A
GLU
449
A
GLU
29
6
1_555
A
ASP
526
A
ASP
106
6
1_555
A
PTR
782
A
PTR
362
6
2_455
B
DC
11
B
DC
11
6
1_555
D
TSP
11
M
TSP
6
1_555
A
ZN
3
G
ZN
4
1_555
A
ASP
526
A
ASP
106
4
1_555
A
ASP
528
A
ASP
108
4
1_555
A
LYS
603
A
LYS
183
4
1_555
A
HIS
981
A
HIS
561
2
1_555
A
GLU
1175
A
GLU
755
2
3_554
A
GLU
615
A
GLU
195
3
1_555
A
HIS
623
A
HIS
203
3
1_555
A
ASP
859
A
ASP
439
3
4_455
A
GLN
553
A
GLN
133
3
2_555
A
HIS
628
A
HIS
208
3
1_555
A
GLU
669
A
GLU
249
3
2_555
A
HIS
736
A
HIS
316
1
1_555
A
ZN
3
G
ZN
14
1_555
A
GLU
449
A
GLU
29
14
1_555
A
LYS
477
A
LYS
57
14
1_555
A
ASP
530
A
ASP
110
14
1_555
A
HIS
736
A
HIS
316
14
1_555
A
GLY
737
A
GLY
317
14
1_555
A
PTR
782
A
PTR
362
14
2_455
C
DC
1
C
DC
1
14
2_455
C
DG
5
C
DG
5
14
1_555
C
DT
6
C
DT
6
14
1_555
D
DT
10
D
DT
10
14
1_555
E
DC
1
E
DC
1
14
2_455
E
DA
5
E
DA
5
14
1_555
E
DA
6
E
DA
6
14
1_555
C
DG
4
C
DG
4
2
1_555
E
DG
4
E
DG
4
2
1_555
18
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