1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Prestegard, J.
Liu, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H15 N5 O11 P2
443.201
n
GUANOSINE-5'-DIPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C14 H28 O2
228.371
MYRISTIC ACID
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure
STRUE6
2005
0969-2126
17
79
87
10.1016/j.str.2008.10.020
19141284
Structure and Membrane Interaction of Myristoylated ARF1
2009
10.2210/pdb2k5u/pdb
pdb_00002k5u
20631.598
ADP-ribosylation factor 1
1
man
polymer
443.201
GUANOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
no
yes
(MYR)GLFASKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRS
LWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQ
ATCATSGEGLYEGLEWLSNSLKNST
XGLFASKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRH
YYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQATCA
TSGEGLYEGLEWLSNSLKNST
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
rat
sample
ARF1
4932
Saccharomyces cerevisiae
562
Escherichia coli
pET20(b)
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
1
0
2009-01-27
1
1
2011-07-13
1
2
2022-03-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BMRB
Y
RCSB
2008-06-30
REL
REL
GDP
GUANOSINE-5'-DIPHOSPHATE
structures with the lowest energy
100
16
3D CBCA(CO)NH
3D HNCA
3D HNCO
3D HNCACB
3D HN(CO)CA
3D HN(COCA)CB
3D 1H-15N NOESY
3D 1H-13C NOESY
3D 13C-filtered-NOESY-13C-edited NOESY
3D doubly-enhanced 13C exicted C-CmHm-TOCSY
2D HSQC-TROSY
2D HSQC-TROSY
3D HNCO-JNCO
3D HNCO-JNCO
0.8
mM
[U-13C; U-15N; U-2H]
0.8
mM
[U-98% 13C; U-98% 15N]
0.8
mM
[U-100% 13C; U-100% 15N; 80% 2H]
0.1
7
ambient
298
K
simulated annealing
1
closest to the average
0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP, 95% H2O/5% D2O
95% H2O/5% D2O
0.8 mM [U-98% 13C; U-98% 15N] myr-yARF1.GDP, 95% H2O/5% D2O
95% H2O/5% D2O
0.8 mM [U-100% 13C; U-100% 15N; 80% 2H] myr-yARF1.GDP, 95% H2O/5% D2O
95% H2O/5% D2O
Varian
collection
VNMR
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
Goddard
chemical shift assignment
Sparky
Brunger, Adams, Clore, Gros, Nilges and Read
structure solution
CNS
Brunger, Adams, Clore, Gros, Nilges and Read
refinement
CNS
600
Varian
INOVA
Varian INOVA
800
Varian
INOVA
Varian INOVA
GDP
182
2
GDP
GDP
182
A
MYR
1
n
1
MYR
1
A
GLY
2
n
2
GLY
2
A
LEU
3
n
3
LEU
3
A
PHE
4
n
4
PHE
4
A
ALA
5
n
5
ALA
5
A
SER
6
n
6
SER
6
A
LYS
7
n
7
LYS
7
A
LEU
8
n
8
LEU
8
A
PHE
9
n
9
PHE
9
A
SER
10
n
10
SER
10
A
ASN
11
n
11
ASN
11
A
LEU
12
n
12
LEU
12
A
PHE
13
n
13
PHE
13
A
GLY
14
n
14
GLY
14
A
ASN
15
n
15
ASN
15
A
LYS
16
n
16
LYS
16
A
GLU
17
n
17
GLU
17
A
MET
18
n
18
MET
18
A
ARG
19
n
19
ARG
19
A
ILE
20
n
20
ILE
20
A
LEU
21
n
21
LEU
21
A
MET
22
n
22
MET
22
A
VAL
23
n
23
VAL
23
A
GLY
24
n
24
GLY
24
A
LEU
25
n
25
LEU
25
A
ASP
26
n
26
ASP
26
A
GLY
27
n
27
GLY
27
A
ALA
28
n
28
ALA
28
A
GLY
29
n
29
GLY
29
A
LYS
30
n
30
LYS
30
A
THR
31
n
31
THR
31
A
THR
32
n
32
THR
32
A
VAL
33
n
33
VAL
33
A
LEU
34
n
34
LEU
34
A
TYR
35
n
35
TYR
35
A
LYS
36
n
36
LYS
36
A
LEU
37
n
37
LEU
37
A
LYS
38
n
38
LYS
38
A
LEU
39
n
39
LEU
39
A
GLY
40
n
40
GLY
40
A
GLU
41
n
41
GLU
41
A
VAL
42
n
42
VAL
42
A
ILE
43
n
43
ILE
43
A
THR
44
n
44
THR
44
A
THR
45
n
45
THR
45
A
ILE
46
n
46
ILE
46
A
PRO
47
n
47
PRO
47
A
THR
48
n
48
THR
48
A
ILE
49
n
49
ILE
49
A
GLY
50
n
50
GLY
50
A
PHE
51
n
51
PHE
51
A
ASN
52
n
52
ASN
52
A
VAL
53
n
53
VAL
53
A
GLU
54
n
54
GLU
54
A
THR
55
n
55
THR
55
A
VAL
56
n
56
VAL
56
A
GLN
57
n
57
GLN
57
A
TYR
58
n
58
TYR
58
A
LYS
59
n
59
LYS
59
A
ASN
60
n
60
ASN
60
A
ILE
61
n
61
ILE
61
A
SER
62
n
62
SER
62
A
PHE
63
n
63
PHE
63
A
THR
64
n
64
THR
64
A
VAL
65
n
65
VAL
65
A
TRP
66
n
66
TRP
66
A
ASP
67
n
67
ASP
67
A
VAL
68
n
68
VAL
68
A
GLY
69
n
69
GLY
69
A
GLY
70
n
70
GLY
70
A
GLN
71
n
71
GLN
71
A
ASP
72
n
72
ASP
72
A
ARG
73
n
73
ARG
73
A
ILE
74
n
74
ILE
74
A
ARG
75
n
75
ARG
75
A
SER
76
n
76
SER
76
A
LEU
77
n
77
LEU
77
A
TRP
78
n
78
TRP
78
A
ARG
79
n
79
ARG
79
A
HIS
80
n
80
HIS
80
A
TYR
81
n
81
TYR
81
A
TYR
82
n
82
TYR
82
A
ARG
83
n
83
ARG
83
A
ASN
84
n
84
ASN
84
A
THR
85
n
85
THR
85
A
GLU
86
n
86
GLU
86
A
GLY
87
n
87
GLY
87
A
VAL
88
n
88
VAL
88
A
ILE
89
n
89
ILE
89
A
PHE
90
n
90
PHE
90
A
VAL
91
n
91
VAL
91
A
VAL
92
n
92
VAL
92
A
ASP
93
n
93
ASP
93
A
SER
94
n
94
SER
94
A
ASN
95
n
95
ASN
95
A
ASP
96
n
96
ASP
96
A
ARG
97
n
97
ARG
97
A
SER
98
n
98
SER
98
A
ARG
99
n
99
ARG
99
A
ILE
100
n
100
ILE
100
A
GLY
101
n
101
GLY
101
A
GLU
102
n
102
GLU
102
A
ALA
103
n
103
ALA
103
A
ARG
104
n
104
ARG
104
A
GLU
105
n
105
GLU
105
A
VAL
106
n
106
VAL
106
A
MET
107
n
107
MET
107
A
GLN
108
n
108
GLN
108
A
ARG
109
n
109
ARG
109
A
MET
110
n
110
MET
110
A
LEU
111
n
111
LEU
111
A
ASN
112
n
112
ASN
112
A
GLU
113
n
113
GLU
113
A
ASP
114
n
114
ASP
114
A
GLU
115
n
115
GLU
115
A
LEU
116
n
116
LEU
116
A
ARG
117
n
117
ARG
117
A
ASN
118
n
118
ASN
118
A
ALA
119
n
119
ALA
119
A
ALA
120
n
120
ALA
120
A
TRP
121
n
121
TRP
121
A
LEU
122
n
122
LEU
122
A
VAL
123
n
123
VAL
123
A
PHE
124
n
124
PHE
124
A
ALA
125
n
125
ALA
125
A
ASN
126
n
126
ASN
126
A
LYS
127
n
127
LYS
127
A
GLN
128
n
128
GLN
128
A
ASP
129
n
129
ASP
129
A
LEU
130
n
130
LEU
130
A
PRO
131
n
131
PRO
131
A
GLU
132
n
132
GLU
132
A
ALA
133
n
133
ALA
133
A
MET
134
n
134
MET
134
A
SER
135
n
135
SER
135
A
ALA
136
n
136
ALA
136
A
ALA
137
n
137
ALA
137
A
GLU
138
n
138
GLU
138
A
ILE
139
n
139
ILE
139
A
THR
140
n
140
THR
140
A
GLU
141
n
141
GLU
141
A
LYS
142
n
142
LYS
142
A
LEU
143
n
143
LEU
143
A
GLY
144
n
144
GLY
144
A
LEU
145
n
145
LEU
145
A
HIS
146
n
146
HIS
146
A
SER
147
n
147
SER
147
A
ILE
148
n
148
ILE
148
A
ARG
149
n
149
ARG
149
A
ASN
150
n
150
ASN
150
A
ARG
151
n
151
ARG
151
A
PRO
152
n
152
PRO
152
A
TRP
153
n
153
TRP
153
A
PHE
154
n
154
PHE
154
A
ILE
155
n
155
ILE
155
A
GLN
156
n
156
GLN
156
A
ALA
157
n
157
ALA
157
A
THR
158
n
158
THR
158
A
CYS
159
n
159
CYS
159
A
ALA
160
n
160
ALA
160
A
THR
161
n
161
THR
161
A
SER
162
n
162
SER
162
A
GLY
163
n
163
GLY
163
A
GLU
164
n
164
GLU
164
A
GLY
165
n
165
GLY
165
A
LEU
166
n
166
LEU
166
A
TYR
167
n
167
TYR
167
A
GLU
168
n
168
GLU
168
A
GLY
169
n
169
GLY
169
A
LEU
170
n
170
LEU
170
A
GLU
171
n
171
GLU
171
A
TRP
172
n
172
TRP
172
A
LEU
173
n
173
LEU
173
A
SER
174
n
174
SER
174
A
ASN
175
n
175
ASN
175
A
SER
176
n
176
SER
176
A
LEU
177
n
177
LEU
177
A
LYS
178
n
178
LYS
178
A
ASN
179
n
179
ASN
179
A
SER
180
n
180
SER
180
A
THR
181
n
181
THR
181
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
45
A
N
THR
45
A
O
VAL
53
A
O
VAL
53
A
N
VAL
56
A
N
VAL
56
A
O
PHE
63
A
O
PHE
63
A
O
THR
64
A
O
THR
64
A
N
MET
22
A
N
MET
22
A
N
ARG
19
A
N
ARG
19
A
O
GLY
87
A
O
GLY
87
A
N
PHE
90
A
N
PHE
90
A
O
LEU
122
A
O
LEU
122
A
N
VAL
123
A
N
VAL
123
A
O
PHE
154
A
O
PHE
154
3
A
A
HG1
O2B
THR
GDP
31
182
1.45
10
A
A
H
O1B
LYS
GDP
30
182
1.58
13
A
A
HG1
O2B
THR
GDP
31
182
1.48
13
A
A
H
O1B
GLY
GDP
29
182
1.55
14
A
A
H
O2B
THR
GDP
31
182
1.53
15
A
A
HG1
O2B
THR
GDP
31
182
1.43
16
A
A
H
O2B
THR
GDP
31
182
1.56
16
A
A
O
HG1
ALA
THR
136
140
1.58
1
A
LEU
3
-102.57
-76.25
1
A
PHE
4
59.21
93.10
1
A
SER
6
62.26
-82.44
1
A
LYS
7
62.09
-80.58
1
A
ASN
15
-168.67
33.69
1
A
GLU
17
62.63
111.31
1
A
LYS
38
83.87
-35.19
1
A
LEU
39
79.27
81.54
1
A
ILE
49
38.94
-108.29
1
A
LYS
59
58.30
-84.12
1
A
TRP
66
-174.35
143.31
1
A
ARG
75
-155.27
-149.99
1
A
ASP
96
-114.36
65.69
1
A
LYS
127
132.66
32.33
1
A
ARG
149
-44.36
154.28
1
A
ARG
151
123.92
-46.35
2
A
PHE
4
60.57
97.18
2
A
SER
6
60.70
102.90
2
A
LYS
7
59.88
159.66
2
A
PHE
9
-145.69
-78.39
2
A
ASN
11
-151.66
20.55
2
A
LEU
12
64.03
135.31
2
A
PHE
13
-132.95
-155.21
2
A
GLU
17
50.80
90.54
2
A
LYS
38
78.08
-54.06
2
A
LEU
39
85.65
86.43
2
A
ILE
49
-12.24
-49.49
2
A
ARG
75
173.57
47.49
2
A
SER
76
-177.89
-96.57
2
A
ASP
96
-114.26
67.94
2
A
LYS
127
132.71
33.65
2
A
ARG
151
123.15
-45.45
2
A
ASN
179
-112.94
65.69
3
A
PHE
9
61.39
108.58
3
A
ASN
11
-142.06
-53.79
3
A
PHE
13
-179.67
39.46
3
A
LYS
16
47.14
92.95
3
A
GLU
17
58.49
108.05
3
A
LYS
38
86.00
-48.72
3
A
LEU
39
74.13
79.18
3
A
ILE
49
39.03
-110.32
3
A
LYS
59
43.29
-93.25
3
A
TRP
66
-171.11
141.06
3
A
ASP
72
61.23
154.38
3
A
TYR
82
-55.85
-71.10
3
A
ASP
96
-112.03
66.54
3
A
LYS
127
132.22
34.73
3
A
ARG
149
-45.36
166.07
3
A
ARG
151
118.73
-42.56
3
A
LYS
178
-85.65
-79.90
3
A
ASN
179
-121.08
-68.55
4
A
SER
6
58.81
-177.96
4
A
LYS
7
-150.10
35.65
4
A
PHE
9
-99.70
37.00
4
A
LEU
12
44.54
20.20
4
A
PHE
13
31.44
39.93
4
A
GLU
17
57.63
110.14
4
A
LYS
38
59.46
-83.46
4
A
LEU
39
71.82
-11.38
4
A
ILE
46
-105.52
76.22
4
A
ILE
61
-177.82
117.94
4
A
ASP
67
-53.63
-176.88
4
A
GLN
71
-146.85
19.97
4
A
ARG
73
-177.27
-42.88
4
A
ARG
75
-172.54
136.84
4
A
LYS
127
134.56
31.05
4
A
ASN
150
151.09
19.59
4
A
ARG
151
38.43
53.53
4
A
ASN
179
-104.80
72.18
5
A
LEU
3
61.11
174.62
5
A
ALA
5
-170.02
-56.78
5
A
LYS
7
63.77
133.38
5
A
SER
10
174.25
99.00
5
A
ASN
11
-148.91
20.85
5
A
PHE
13
-143.24
-53.35
5
A
ASN
15
-141.92
-112.60
5
A
ALA
28
-61.16
-100.79
5
A
LYS
38
62.60
88.81
5
A
ILE
49
38.80
-110.93
5
A
LYS
59
35.39
87.08
5
A
ASN
60
72.85
-54.82
5
A
VAL
68
33.31
77.98
5
A
GLN
71
-160.63
24.56
5
A
SER
76
73.28
-65.11
5
A
TYR
82
-56.32
-70.46
5
A
LYS
127
131.13
35.10
5
A
ARG
149
-44.39
109.13
5
A
ARG
151
127.86
-47.23
5
A
LYS
178
-88.34
-70.36
5
A
ASN
179
63.87
-77.58
5
A
SER
180
62.61
-80.91
6
A
LEU
3
61.70
116.77
6
A
ALA
5
59.80
179.36
6
A
LYS
7
61.20
93.54
6
A
PHE
9
62.41
125.84
6
A
SER
10
-165.20
93.03
6
A
ASN
11
-156.79
39.93
6
A
LEU
12
47.20
93.56
6
A
ASN
15
-111.58
71.94
6
A
GLU
17
61.78
110.34
6
A
LYS
38
59.27
-81.96
6
A
LEU
39
68.16
-0.40
6
A
ILE
49
37.88
-106.17
6
A
ASN
60
79.89
-43.29
6
A
VAL
68
20.32
74.04
6
A
GLN
71
-163.35
24.63
6
A
ARG
73
70.20
98.86
6
A
ARG
75
-153.94
-72.34
6
A
SER
76
-130.15
-68.05
6
A
TYR
82
-55.87
-72.03
6
A
LYS
127
134.28
31.87
6
A
ARG
149
-44.40
109.43
6
A
ARG
151
140.58
-54.03
6
A
ASN
179
-100.49
-85.09
6
A
SER
180
167.65
-179.75
7
A
LEU
3
62.03
102.72
7
A
ALA
5
-168.92
-67.50
7
A
SER
6
-173.70
100.46
7
A
LEU
8
-155.71
32.42
7
A
ASN
11
-158.99
-66.45
7
A
ASN
15
-149.20
-84.06
7
A
LYS
16
-85.79
49.90
7
A
GLU
17
64.68
116.30
7
A
LYS
38
159.59
-68.20
7
A
LEU
39
73.82
61.45
7
A
LYS
59
35.39
84.44
7
A
ASN
60
75.89
-55.38
7
A
ASP
67
-48.47
177.34
7
A
VAL
68
-39.63
94.55
7
A
GLN
71
-178.40
-29.35
7
A
ASP
72
55.45
168.52
7
A
ILE
74
72.29
143.10
7
A
SER
76
-164.74
-61.33
7
A
TYR
82
-56.22
-71.22
7
A
ASP
96
-117.81
66.50
7
A
LYS
127
135.88
31.17
7
A
ARG
149
-44.01
109.53
7
A
ARG
151
134.51
-51.23
7
A
ASN
179
-95.37
-67.09
8
A
PHE
4
-136.74
-55.97
8
A
LYS
7
63.09
128.14
8
A
LEU
8
60.79
-155.99
8
A
PHE
9
-91.68
37.79
8
A
SER
10
59.59
111.03
8
A
PHE
13
63.36
-74.06
8
A
GLU
17
63.96
112.31
8
A
LYS
38
79.46
-68.34
8
A
ILE
49
38.01
-105.67
8
A
LYS
59
62.05
-81.27
8
A
GLN
71
-176.20
-30.26
8
A
ASP
72
-43.84
102.32
8
A
SER
76
174.93
-71.02
8
A
ASP
96
-111.25
69.78
8
A
LYS
127
134.53
29.90
8
A
ARG
151
121.13
-43.61
8
A
ASN
179
65.08
-81.01
8
A
SER
180
-178.92
-72.40
9
A
LEU
3
-160.51
30.45
9
A
PHE
4
-134.06
-61.10
9
A
SER
6
-177.93
-39.62
9
A
LEU
8
-127.52
-67.36
9
A
SER
10
-174.59
134.97
9
A
ASN
15
61.34
61.55
9
A
LYS
16
-142.89
49.65
9
A
LYS
38
53.79
81.91
9
A
ILE
49
38.29
-109.42
9
A
LYS
59
57.23
-86.12
9
A
GLN
71
-168.16
-34.00
9
A
ASP
72
77.51
-53.71
9
A
ARG
73
79.42
-55.90
9
A
SER
76
-179.14
-67.58
9
A
ASP
96
-116.82
68.56
9
A
LYS
127
138.90
31.39
9
A
ARG
151
120.27
-43.02
9
A
ASN
179
-99.82
39.87
9
A
SER
180
-178.34
-70.87
10
A
SER
6
-178.18
-39.43
10
A
LYS
7
-170.92
102.38
10
A
LEU
8
-88.10
-81.43
10
A
PHE
9
60.09
-75.74
10
A
SER
10
-174.94
106.74
10
A
LEU
12
47.03
94.21
10
A
GLU
17
54.53
106.13
10
A
LYS
38
58.62
-83.39
10
A
LEU
39
71.60
-6.24
10
A
ILE
49
37.07
-108.63
10
A
ASN
60
-152.88
37.87
10
A
ILE
61
178.76
140.89
10
A
TRP
66
-171.63
134.33
10
A
ARG
75
-131.25
-62.65
10
A
SER
76
-179.72
-35.56
10
A
ASP
96
-117.11
65.50
10
A
LYS
127
135.64
32.89
10
A
ARG
149
-44.17
109.44
10
A
ARG
151
139.38
-52.70
10
A
LYS
178
-87.92
-74.61
10
A
ASN
179
65.76
-75.14
10
A
SER
180
-173.73
-76.25
11
A
ALA
5
60.12
-177.04
11
A
SER
6
64.32
-78.76
11
A
LEU
8
-170.06
34.64
11
A
LEU
12
62.75
157.17
11
A
ASN
15
-58.96
87.42
11
A
LYS
38
61.30
-84.95
11
A
LEU
39
80.64
-31.04
11
A
ILE
49
37.23
-105.32
11
A
LYS
59
64.53
-71.26
11
A
ASN
60
-147.08
-31.16
11
A
TRP
66
-172.05
147.46
11
A
ASP
67
-59.20
172.63
11
A
ARG
73
-166.29
-59.92
11
A
ARG
75
176.10
175.05
11
A
ASP
96
-112.32
65.90
11
A
LYS
127
129.88
34.17
11
A
ARG
149
-44.56
109.14
11
A
ARG
151
132.16
-48.91
11
A
ASN
179
-97.64
-68.40
11
A
SER
180
179.00
-168.78
12
A
ALA
5
-138.38
-60.19
12
A
SER
6
-163.42
-55.57
12
A
SER
10
-61.91
96.88
12
A
LEU
12
-28.15
95.32
12
A
ASN
15
92.03
-11.05
12
A
GLU
17
-48.08
158.56
12
A
LYS
38
61.25
-82.85
12
A
LEU
39
72.15
-11.55
12
A
ILE
49
-23.19
-41.51
12
A
LYS
59
58.23
-85.44
12
A
VAL
68
29.54
83.59
12
A
GLN
71
-155.38
27.23
12
A
ARG
73
177.11
103.97
12
A
ILE
74
-137.35
-42.76
12
A
ARG
75
178.94
-76.60
12
A
SER
76
-147.49
10.59
12
A
TYR
82
-56.32
-70.59
12
A
ASP
96
-118.94
69.51
12
A
LYS
127
135.84
32.32
12
A
ARG
149
-45.04
153.05
12
A
ARG
151
119.02
-43.48
12
A
ASN
179
64.10
126.04
12
A
SER
180
-140.21
-69.05
13
A
LEU
3
-97.81
-72.09
13
A
PHE
4
65.68
-69.90
13
A
LEU
12
157.88
-174.55
13
A
PHE
13
-148.39
33.29
13
A
ASN
15
66.83
96.87
13
A
GLU
17
56.33
102.28
13
A
LYS
38
63.94
-79.29
13
A
LEU
39
66.97
74.33
13
A
ILE
49
37.27
-98.96
13
A
LYS
59
32.27
79.50
13
A
ASN
60
76.50
-56.16
13
A
TRP
66
-178.06
149.40
13
A
VAL
68
31.73
68.73
13
A
GLN
71
173.21
26.67
13
A
ASP
72
-61.75
99.99
13
A
ILE
74
-148.92
-40.61
13
A
ARG
75
-169.03
-160.78
13
A
ASP
96
-116.51
68.01
13
A
LYS
127
136.97
32.46
13
A
ARG
151
122.07
-48.81
13
A
LYS
178
-88.36
-72.66
13
A
ASN
179
-176.91
138.36
13
A
SER
180
61.26
-174.48
14
A
PHE
4
-59.20
-71.16
14
A
SER
10
-141.50
-41.07
14
A
PHE
13
-150.00
-109.17
14
A
ASN
15
-177.52
27.26
14
A
GLU
17
61.91
108.04
14
A
LYS
38
65.55
-83.91
14
A
LEU
39
70.31
-16.36
14
A
ILE
49
-28.15
-37.79
14
A
LYS
59
64.82
-71.01
14
A
ASN
60
-141.42
-34.46
14
A
ASP
67
-53.12
174.67
14
A
VAL
68
-46.84
98.74
14
A
GLN
71
-147.90
-37.37
14
A
ASP
72
58.82
-174.67
14
A
ASP
96
-118.75
66.57
14
A
LYS
127
132.86
33.48
14
A
ARG
151
126.76
-35.81
15
A
PHE
4
-171.23
-42.24
15
A
LEU
8
-127.05
-65.65
15
A
PHE
9
-131.14
-49.01
15
A
ASN
11
-177.47
-39.59
15
A
LEU
12
87.08
88.99
15
A
ASN
15
-176.94
44.12
15
A
GLU
17
62.53
110.73
15
A
LYS
38
69.65
-79.07
15
A
ILE
46
-119.95
73.84
15
A
LYS
59
-41.13
-70.24
15
A
TRP
66
-175.25
145.01
15
A
ASP
67
-59.68
-178.05
15
A
VAL
68
-44.71
90.69
15
A
ARG
73
-126.37
-74.42
15
A
SER
76
-177.47
-71.75
15
A
LYS
127
137.37
30.43
15
A
ARG
149
-44.37
109.23
15
A
ARG
151
140.66
-53.78
16
A
LEU
3
60.10
96.38
16
A
ALA
5
60.77
103.51
16
A
SER
6
-162.64
-53.59
16
A
PHE
9
59.38
-177.64
16
A
LEU
12
-41.75
96.89
16
A
LYS
16
-36.41
88.84
16
A
GLU
17
60.91
150.26
16
A
LYS
38
42.53
-84.67
16
A
LEU
39
73.11
-14.73
16
A
ILE
49
36.87
-104.41
16
A
LYS
59
43.25
-91.33
16
A
ASP
67
-58.24
173.01
16
A
GLN
71
-174.97
-31.93
16
A
ASP
72
71.84
-172.11
16
A
SER
76
176.03
-48.35
16
A
ASP
96
-117.45
65.95
16
A
LYS
127
132.41
31.71
16
A
ARG
149
-45.45
166.18
16
A
ARG
151
122.50
-47.37
16
A
ASN
179
66.54
-81.40
16
A
SER
180
-179.25
-77.46
Solution structure of myirstoylated yeast ARF1 protein, GDP-bound
1
N
N
2
N
N
A
GLY
29
A
GLY
29
HELX_P
A
LYS
38
A
LYS
38
1
1
10
A
SER
76
A
SER
76
HELX_P
A
THR
85
A
THR
85
1
2
10
A
ASP
96
A
ASP
96
HELX_P
A
SER
98
A
SER
98
5
3
3
A
ARG
99
A
ARG
99
HELX_P
A
ASN
112
A
ASN
112
1
4
14
A
GLU
113
A
GLU
113
HELX_P
A
ARG
117
A
ARG
117
5
5
5
A
SER
135
A
SER
135
HELX_P
A
LEU
143
A
LEU
143
1
6
9
A
GLY
144
A
GLY
144
HELX_P
A
ILE
148
A
ILE
148
5
7
5
A
GLY
165
A
GLY
165
HELX_P
A
ASN
179
A
ASN
179
1
8
15
covale
1.328
both
A
MYR
1
A
C1
MYR
1
1_555
A
GLY
2
A
N
GLY
2
1_555
SIGNALING PROTEIN
ARF, ARF1, myristoyl, myrsitoylated, GDP, ER-Golgi transport, Golgi apparatus, GTP-binding, Lipoprotein, Myristate, Nucleotide-binding, Protein transport, Transport, SIGNALING PROTEIN
ARF1_YEAST
UNP
1
2
P11076
GLFASKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHY
YRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQATCAT
SGEGLYEGLEWLSNSLKNST
2
181
2K5U
2
181
P11076
A
1
2
181
1
insertion
MYR
1
2K5U
A
P11076
UNP
1
7
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
A
ILE
43
A
ILE
43
A
THR
45
A
THR
45
A
VAL
53
A
VAL
53
A
TYR
58
A
TYR
58
A
ILE
61
A
ILE
61
A
VAL
65
A
VAL
65
A
ARG
19
A
ARG
19
A
VAL
23
A
VAL
23
A
GLY
87
A
GLY
87
A
ASP
93
A
ASP
93
A
ALA
120
A
ALA
120
A
ASN
126
A
ASN
126
A
TRP
153
A
TRP
153
A
THR
158
A
THR
158
BINDING SITE FOR RESIDUE MYR A 1
A
MYR
1
Software
4
BINDING SITE FOR RESIDUE GDP A 182
A
GDP
182
Software
14
A
GLY
2
A
GLY
2
4
1_555
A
LYS
36
A
LYS
36
4
1_555
A
LEU
37
A
LEU
37
4
1_555
A
LYS
38
A
LYS
38
4
1_555
A
LEU
25
A
LEU
25
14
1_555
A
ASP
26
A
ASP
26
14
1_555
A
GLY
27
A
GLY
27
14
1_555
A
ALA
28
A
ALA
28
14
1_555
A
GLY
29
A
GLY
29
14
1_555
A
LYS
30
A
LYS
30
14
1_555
A
THR
31
A
THR
31
14
1_555
A
ASN
95
A
ASN
95
14
1_555
A
ASN
126
A
ASN
126
14
1_555
A
LYS
127
A
LYS
127
14
1_555
A
GLN
128
A
GLN
128
14
1_555
A
ASP
129
A
ASP
129
14
1_555
A
LEU
130
A
LEU
130
14
1_555
A
ALA
160
A
ALA
160
14
1_555