0.012458
0.000000
0.000000
0.000000
0.008066
0.000000
0.000000
0.000000
0.026762
0.00000
0.00000
0.00000
Holloway, D.E.
Baker, M.D.
Acharya, K.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
80.270
123.973
37.366
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H8 O7
192.124
CITRIC ACID
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
C
N
75
N
O
N
76
N
O
N
77
N
C
N
78
N
C
N
79
N
O
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
O
N
84
N
C
N
85
N
O
N
86
N
O
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
R
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
S
N
101
N
O
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
N
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
S
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
O
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
N
C
N
150
N
C
N
151
N
O
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
N
C
Y
163
N
C
Y
164
N
N
Y
165
N
C
Y
166
N
C
Y
167
N
N
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
S
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
N
N
205
S
C
N
206
N
C
N
207
N
O
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
C
N
234
N
N
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
S
N
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
O
N
315
N
C
N
316
N
O
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
R
C
N
330
N
O
N
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
N
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
N
380
N
O
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
O
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
Y
160
N
sing
Y
161
N
doub
Y
162
N
doub
N
163
N
sing
Y
164
N
sing
N
165
N
sing
Y
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
doub
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
Y
268
N
doub
Y
269
N
sing
Y
270
N
sing
N
271
N
sing
Y
272
N
doub
N
273
N
sing
Y
274
N
doub
N
275
N
sing
Y
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
doub
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
Y
337
N
doub
Y
338
N
sing
Y
339
N
sing
N
340
N
sing
Y
341
N
doub
Y
342
N
sing
Y
343
N
sing
N
344
N
sing
Y
345
N
sing
Y
346
N
doub
N
347
N
sing
Y
348
N
doub
N
349
N
sing
Y
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
doub
N
372
N
sing
Y
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
43
1230
10.1021/BI035654+
14756559
Crystallographic Studies on Structural Features that Determine the Enzymatic Specificity and Potency of Human Angiogenin: Thr44, Thr80 and Residues 38-41
2004
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
285
1209
10.1006/JMBI.1998.2378
9918722
Refined Crystal Structures of Native Human Angiogenin and Two Active Site Variants: Implications for the Unique Functional Properties of an Enzyme Involved in Neovascularisation During Tumour Growth
1999
US
Biochemistry
BICHAW
0033
0006-2960
29
7297
10.1021/BI00483A020
1698454
Mutagenesis of Residues Flanking Lys-40 Enhances the Enzymatic Activity and Reduces the Angiogenic Potency of Angiogenin
1990
10.2210/pdb1un5/pdb
pdb_00001un5
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293.0
1
RH/SI MIRROR
CCD
2002-10-04
ADSC CCD
SILICON
SINGLE WAVELENGTH
M
x-ray
1
1.488
1.0
PX14.1
SRS
1.488
SYNCHROTRON
SRS BEAMLINE PX14.1
RESIDUES 38-42 IN THE COORDINATES ARE FROM BOVINE PANCREATIC RIBONUCLEASE A
14457.428
ANGIOGENIN
3.1.27.5
YES
1
man
polymer
192.124
CITRIC ACID
1
syn
non-polymer
18.015
water
9
nat
water
RIBONUCLEASE 5, RNASE 5
no
no
MQDNSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLTSDRCKPINTFIHGNKRSIKAICENKNGNPHRENLRISKSSFQV
TTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFRRP
MQDNSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLTSDRCKPINTFIHGNKRSIKAICENKNGNPHRENLRISKSSFQV
TTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFRRP
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
GUEST SEGMENT IS BOVINE. SYNTHETIC GENE
9606
HOMO SAPIENS
562
ESCHERICHIA COLI
W3110
PANG3
1
3.2
62
5.40
10% PEG 6000, PH 5.4 0.2M SODIUM POTASSIUM TARTRATE, 0.02M SODIUM CITRATE BUFFER
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Refinement description
1
0
2004-02-06
1
1
2011-05-08
1
2
2011-07-13
1
3
2023-12-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RIBONUCLEASE INHIBITOR-ANGIOGENIN COMPLEX
ANGIOGENIN
3D SOLUTION STRUCTURE OF HUMAN ANGIOGENIN DETERMINED BY 1H, 15N NMR SPECTROSCOPY, 30 STRUCTURES
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT K40Q
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT H13A.
GUEST-HOST CROSSTALK IN AN ANGIOGENIN/RNASE A CHIMERIC PROTEIN
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN IN COMPLEX WITH FAB FRAGMENT OF ITS MONOCLONAL ANTIBODY MAB 26-2F
BINDING OF PHOSPHATE AND PYROPHOSPHATE IONS AT THE ACTIVE SITE OF HUMAN ANGIOGENIN AS REVEALED BY X-RAY CRYSTALLOGRAPHY
BINDING OF PHOSPHATE AND PYROPHOSPHATE IONS AT THE ACTIVE SITE OF HUMAN ANGIOGENIN AS REVEALED BY X-RAY CRYSTALLOGRAPHY
BINDING OF PHOSPHATE AND PYROPHOSPHATE IONS AT THE ACTIVE SITE OF HUMAN ANGIOGENIN AS REVEALED BY X-RAY CRYSTALLOGRAPHY
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT D116H
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT Q117G
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN DOUBLE VARIANTI119A/F120A
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT DES(121-123)
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT T44D
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT T80A
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN OF THE MET(-1) FORM
PDBE
Y
PDBE
2003-09-04
REL
CIT
CITRIC ACID
HOH
water
REPLACEMENT OF ANGIOGENIN 62-65 WITH RIBONUCLEASE A 64-68.
(RESIDUE NUMBERING BASED ON SWISSPROT SEQUENCE DATABASE).
THE RESIDUE NUMBERS REPLACED IN THE COORDINATES ARE 38-41
OF ANGIOGENIN WITH RESIDUES 38-42 OF BOVINE
RIBONUCLEASE.
ANGIOGENIC RIBONUCLEASE THAT BINDS TO ACTIN ON THE SURFACE
OF ENDOTHELIAL CELLS
2ANG
PDB ENTRY 2ANG
PDB
experimental model
CIT
1124
2
CIT
CIT
1124
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
n
1
0
A
n
2
1
A
n
3
2
A
ASN
3
n
4
ASN
3
A
SER
4
n
5
SER
4
A
ARG
5
n
6
ARG
5
A
TYR
6
n
7
TYR
6
A
THR
7
n
8
THR
7
A
HIS
8
n
9
HIS
8
A
PHE
9
n
10
PHE
9
A
LEU
10
n
11
LEU
10
A
THR
11
n
12
THR
11
A
GLN
12
n
13
GLN
12
A
HIS
13
n
14
HIS
13
A
TYR
14
n
15
TYR
14
A
ASP
15
n
16
ASP
15
A
ALA
16
n
17
ALA
16
A
LYS
17
n
18
LYS
17
A
PRO
18
n
19
PRO
18
A
GLN
19
n
20
GLN
19
A
GLY
20
n
21
GLY
20
A
ARG
21
n
22
ARG
21
A
ASP
22
n
23
ASP
22
A
ASP
23
n
24
ASP
23
A
ARG
24
n
25
ARG
24
A
TYR
25
n
26
TYR
25
A
CYS
26
n
27
CYS
26
A
GLU
27
n
28
GLU
27
A
SER
28
n
29
SER
28
A
ILE
29
n
30
ILE
29
A
MET
30
n
31
MET
30
A
ARG
31
n
32
ARG
31
A
ARG
32
n
33
ARG
32
A
ARG
33
n
34
ARG
33
A
GLY
34
n
35
GLY
34
A
LEU
35
n
36
LEU
35
A
THR
36
n
37
THR
36
A
SER
37
n
38
SER
37
A
ASP
38
n
39
ASP
38
A
ARG
39
n
40
ARG
39
A
CYS
40
n
41
CYS
40
A
LYS
41
n
42
LYS
41
A
PRO
42
n
43
PRO
42
A
ILE
43
n
44
ILE
43
A
ASN
44
n
45
ASN
44
A
THR
45
n
46
THR
45
A
PHE
46
n
47
PHE
46
A
ILE
47
n
48
ILE
47
A
HIS
48
n
49
HIS
48
A
GLY
49
n
50
GLY
49
A
ASN
50
n
51
ASN
50
A
LYS
51
n
52
LYS
51
A
ARG
52
n
53
ARG
52
A
SER
53
n
54
SER
53
A
ILE
54
n
55
ILE
54
A
LYS
55
n
56
LYS
55
A
ALA
56
n
57
ALA
56
A
ILE
57
n
58
ILE
57
A
CYS
58
n
59
CYS
58
A
GLU
59
n
60
GLU
59
A
ASN
60
n
61
ASN
60
A
LYS
61
n
62
LYS
61
A
ASN
62
n
63
ASN
62
A
GLY
63
n
64
GLY
63
A
ASN
64
n
65
ASN
64
A
PRO
65
n
66
PRO
65
A
HIS
66
n
67
HIS
66
A
ARG
67
n
68
ARG
67
A
GLU
68
n
69
GLU
68
A
ASN
69
n
70
ASN
69
A
LEU
70
n
71
LEU
70
A
ARG
71
n
72
ARG
71
A
ILE
72
n
73
ILE
72
A
SER
73
n
74
SER
73
A
LYS
74
n
75
LYS
74
A
SER
75
n
76
SER
75
A
SER
76
n
77
SER
76
A
PHE
77
n
78
PHE
77
A
GLN
78
n
79
GLN
78
A
VAL
79
n
80
VAL
79
A
THR
80
n
81
THR
80
A
THR
81
n
82
THR
81
A
CYS
82
n
83
CYS
82
A
LYS
83
n
84
LYS
83
A
LEU
84
n
85
LEU
84
A
HIS
85
n
86
HIS
85
A
GLY
86
n
87
GLY
86
A
GLY
87
n
88
GLY
87
A
SER
88
n
89
SER
88
A
PRO
89
n
90
PRO
89
A
TRP
90
n
91
TRP
90
A
PRO
91
n
92
PRO
91
A
PRO
92
n
93
PRO
92
A
CYS
93
n
94
CYS
93
A
GLN
94
n
95
GLN
94
A
TYR
95
n
96
TYR
95
A
ARG
96
n
97
ARG
96
A
ALA
97
n
98
ALA
97
A
THR
98
n
99
THR
98
A
ALA
99
n
100
ALA
99
A
GLY
100
n
101
GLY
100
A
PHE
101
n
102
PHE
101
A
ARG
102
n
103
ARG
102
A
ASN
103
n
104
ASN
103
A
VAL
104
n
105
VAL
104
A
VAL
105
n
106
VAL
105
A
VAL
106
n
107
VAL
106
A
ALA
107
n
108
ALA
107
A
CYS
108
n
109
CYS
108
A
GLU
109
n
110
GLU
109
A
ASN
110
n
111
ASN
110
A
GLY
111
n
112
GLY
111
A
LEU
112
n
113
LEU
112
A
PRO
113
n
114
PRO
113
A
VAL
114
n
115
VAL
114
A
HIS
115
n
116
HIS
115
A
LEU
116
n
117
LEU
116
A
ASP
117
n
118
ASP
117
A
GLN
118
n
119
GLN
118
A
SER
119
n
120
SER
119
A
ILE
120
n
121
ILE
120
A
PHE
121
n
122
PHE
121
A
ARG
122
n
123
ARG
122
A
ARG
123
n
124
ARG
123
A
n
125
124
A
author_and_software_defined_assembly
PQS
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
46
A
N
PHE
47
A
O
THR
80
A
O
THR
81
A
N
LYS
83
A
N
LYS
84
A
O
ARG
96
A
O
ARG
97
A
N
HIS
66
A
N
HIS
67
A
O
LEU
70
A
O
LEU
71
A
N
ARG
71
A
N
ARG
72
A
O
VAL
106
A
O
VAL
107
A
N
GLU
109
A
N
GLU
110
A
O
LEU
112
A
O
LEU
113
1
A
N
ASN
3
A
N
ASN
4
1
Y
1
A
CB
ASN
3
A
CB
ASN
4
1
Y
1
A
CG
ASN
3
A
CG
ASN
4
1
Y
1
A
OD1
ASN
3
A
OD1
ASN
4
1
Y
1
A
ND2
ASN
3
A
ND2
ASN
4
1
Y
1
A
OG
SER
4
A
OG
SER
5
1
Y
1
A
CD
LYS
17
A
CD
LYS
18
1
Y
1
A
CE
LYS
17
A
CE
LYS
18
1
Y
1
A
NZ
LYS
17
A
NZ
LYS
18
1
Y
1
A
CG
GLN
19
A
CG
GLN
20
1
Y
1
A
CD
GLN
19
A
CD
GLN
20
1
Y
1
A
OE1
GLN
19
A
OE1
GLN
20
1
Y
1
A
NE2
GLN
19
A
NE2
GLN
20
1
Y
1
A
CD
ARG
24
A
CD
ARG
25
1
Y
1
A
NE
ARG
24
A
NE
ARG
25
1
Y
1
A
CZ
ARG
24
A
CZ
ARG
25
1
Y
1
A
NH1
ARG
24
A
NH1
ARG
25
1
Y
1
A
NH2
ARG
24
A
NH2
ARG
25
1
Y
1
A
CD
ARG
39
A
CD
ARG
40
1
Y
1
A
NE
ARG
39
A
NE
ARG
40
1
Y
1
A
CZ
ARG
39
A
CZ
ARG
40
1
Y
1
A
NH1
ARG
39
A
NH1
ARG
40
1
Y
1
A
NH2
ARG
39
A
NH2
ARG
40
1
Y
1
A
CG
ARG
52
A
CG
ARG
53
1
Y
1
A
CD
ARG
52
A
CD
ARG
53
1
Y
1
A
NE
ARG
52
A
NE
ARG
53
1
Y
1
A
CZ
ARG
52
A
CZ
ARG
53
1
Y
1
A
NH1
ARG
52
A
NH1
ARG
53
1
Y
1
A
NH2
ARG
52
A
NH2
ARG
53
1
Y
1
A
CG
ASN
60
A
CG
ASN
61
1
Y
1
A
OD1
ASN
60
A
OD1
ASN
61
1
Y
1
A
ND2
ASN
60
A
ND2
ASN
61
1
Y
1
A
CG
LYS
61
A
CG
LYS
62
1
Y
1
A
CD
LYS
61
A
CD
LYS
62
1
Y
1
A
CE
LYS
61
A
CE
LYS
62
1
Y
1
A
NZ
LYS
61
A
NZ
LYS
62
1
Y
1
A
CG
ASN
69
A
CG
ASN
70
1
Y
1
A
OD1
ASN
69
A
OD1
ASN
70
1
Y
1
A
ND2
ASN
69
A
ND2
ASN
70
1
Y
1
A
CD
LYS
83
A
CD
LYS
84
1
Y
1
A
CE
LYS
83
A
CE
LYS
84
1
Y
1
A
NZ
LYS
83
A
NZ
LYS
84
1
Y
1
A
CD
ARG
96
A
CD
ARG
97
1
Y
1
A
NE
ARG
96
A
NE
ARG
97
1
Y
1
A
CZ
ARG
96
A
CZ
ARG
97
1
Y
1
A
NH1
ARG
96
A
NH1
ARG
97
1
Y
1
A
NH2
ARG
96
A
NH2
ARG
97
1
Y
1
A
C
ARG
123
A
C
ARG
124
1
Y
1
A
O
ARG
123
A
O
ARG
124
1
Y
1
A
CB
ARG
123
A
CB
ARG
124
1
Y
1
A
CG
ARG
123
A
CG
ARG
124
1
Y
1
A
CD
ARG
123
A
CD
ARG
124
1
Y
1
A
NE
ARG
123
A
NE
ARG
124
1
Y
1
A
CZ
ARG
123
A
CZ
ARG
124
1
Y
1
A
NH1
ARG
123
A
NH1
ARG
124
1
Y
1
A
NH2
ARG
123
A
NH2
ARG
124
1
Y
1
A
MET
0
A
MET
1
1
Y
1
A
GLN
1
A
GLN
2
1
Y
1
A
ASP
2
A
ASP
3
1
Y
1
A
PRO
124
A
PRO
125
1
Y
1
5.55
0.90
118.30
123.85
A
A
A
CB
CG
OD2
ASP
ASP
ASP
15
15
15
N
1
A
ASP
38
-107.74
-60.66
1
A
ARG
67
42.86
-127.58
52.43
-0.55000
0.00000
0.00000
4.13000
0.00000
-3.58000
0.928
0.913
0.237
0.207
0.208
2.60
67.42
259
5503
4.500
95.1
4.954
0.120
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.469
0.273
0.80
0.80
1.40
PDB ENTRY 2ANG
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.60
67.42
9
945
13
0
923
0.010
0.021
1034
1.342
1.936
1395
5.697
5.000
122
0.095
0.200
140
0.004
0.020
811
0.196
0.200
337
0.129
0.200
30
0.270
0.200
20
0.173
0.200
4
0.835
1.500
613
1.560
2.000
992
1.751
3.000
421
2.982
4.500
403
0.2350
0.1260
2.69
27
546
15
2.600
40.000
1UN5
5767
0.09800
1
19.1000
6.100
95.1
0.25700
2.60
2.66
8.300
1
98.0
refinement
REFMAC
5.1.19
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
ARH-II, AN ANGIOGENIN/RNASE A CHIMERA
1
N
N
2
N
N
3
N
N
A
SER
4
A
SER
5
HELX_P
A
TYR
14
A
TYR
15
1
1
11
A
ASP
22
A
ASP
23
HELX_P
A
ARG
33
A
ARG
34
1
2
12
A
ASN
50
A
ASN
51
HELX_P
A
ALA
56
A
ALA
57
1
3
7
A
ILE
57
A
ILE
58
HELX_P
A
GLU
59
A
GLU
60
5
4
3
A
GLN
118
A
GLN
119
HELX_P
A
ARG
122
A
ARG
123
5
5
5
disulf
2.023
A
CYS
26
A
SG
CYS
27
1_555
A
CYS
82
A
SG
CYS
83
1_555
disulf
2.019
A
CYS
40
A
SG
CYS
41
1_555
A
CYS
93
A
SG
CYS
94
1_555
disulf
2.025
A
CYS
58
A
SG
CYS
59
1_555
A
CYS
108
A
SG
CYS
109
1_555
HYDROLASE
HYDROLASE, PANCREATIC RIBONUCLEASE, ANGIOGENESIS, ANGIOGENIN, CHIMERA, HYBRID, HOMOLOG SCANNING MUTAGENESIS
A
PRO
91
A
PRO
92
1
A
PRO
92
A
PRO
93
1.19
1UN5
PDB
1
1UN5
ANGI_HUMAN
UNP
1
P03950
RNP_BOVIN
UNP
1
P00656
0
0
1UN5
0
0
1UN5
A
1
1
1
25
61
1UN5
1
37
P03950
A
2
2
38
64
68
1UN5
38
42
P00656
A
3
39
43
66
147
1UN5
43
124
P03950
A
2
44
125
3
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
43
A
ILE
44
A
ILE
47
A
ILE
48
A
PHE
77
A
PHE
78
A
LEU
84
A
LEU
85
A
TYR
95
A
TYR
96
A
ARG
102
A
ARG
103
A
GLY
63
A
GLY
64
A
HIS
66
A
HIS
67
A
LEU
70
A
LEU
71
A
SER
73
A
SER
74
A
VAL
105
A
VAL
106
A
GLU
109
A
GLU
110
A
LEU
112
A
LEU
113
A
LEU
116
A
LEU
117
BINDING SITE FOR RESIDUE CIT A1124
Software
5
A
HIS
66
A
HIS
67
5
1_555
A
ARG
67
A
ARG
68
5
1_555
A
GLY
100
A
GLY
101
5
1_555
A
PHE
101
A
PHE
102
5
1_555
A
ARG
102
A
ARG
103
5
1_555
20
C 2 2 21