0.029426
0.000000
0.001372
0.000000
0.010977
0.000000
0.000000
0.000000
0.027236
0.000000
0.000000
0.000000
Anderson, S.
Crosson, S.
Moffat, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
92.67
90.00
33.983
91.102
36.756
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C9 H8 O3
164.158
4'-HYDROXYCINNAMIC ACID
PARA-COUMARIC ACID
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
O
N
140
N
C
N
141
N
C
Y
142
N
C
Y
143
N
C
Y
144
N
C
Y
145
N
C
Y
146
N
C
Y
147
N
C
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
S
C
N
159
N
C
N
160
N
O
N
161
N
C
Y
162
N
C
Y
163
N
N
Y
164
N
C
Y
165
N
C
Y
166
N
N
N
167
N
O
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
N
N
182
S
C
N
183
N
C
N
184
N
O
N
185
S
C
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
N
N
234
N
O
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
N
255
N
C
N
256
N
S
N
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
Y
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
N
C
N
315
N
O
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
R
C
N
329
N
O
N
330
N
C
N
331
N
O
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
N
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
N
379
N
O
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
N
397
N
C
N
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
E
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
Y
137
N
doub
Y
138
N
sing
Y
139
N
sing
N
140
N
sing
Y
141
N
doub
N
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
Y
160
N
sing
Y
161
N
doub
Y
162
N
doub
N
163
N
sing
Y
164
N
sing
N
165
N
sing
Y
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
doub
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
Y
268
N
doub
Y
269
N
sing
Y
270
N
sing
N
271
N
sing
Y
272
N
doub
N
273
N
sing
Y
274
N
doub
N
275
N
sing
Y
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
doub
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
Y
337
N
doub
Y
338
N
sing
Y
339
N
sing
N
340
N
sing
Y
341
N
doub
Y
342
N
sing
Y
343
N
sing
N
344
N
sing
Y
345
N
sing
Y
346
N
doub
N
347
N
sing
Y
348
N
doub
N
349
N
sing
Y
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
doub
N
372
N
sing
Y
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
60
1008
1016
10.1107/S090744490400616X
15159559
Short hydrogen bonds in photoactive yellow protein.
2004
10.2210/pdb1otd/pdb
pdb_00001otd
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
CCD
1999-11-30
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
14-BM-C
APS
1.0
SYNCHROTRON
APS BEAMLINE 14-BM-C
13886.557
Photoactive yellow protein
2
man
polymer
164.158
4'-HYDROXYCINNAMIC ACID
4
syn
non-polymer
18.015
water
224
nat
water
PYP
no
no
MEHVAFGSEDIENTLAKMDDSQLDNLAFGAIQLDGDGTILQYNAAEGDITGRNPKEVIGKNFFKDVAPCTDSPEFSGKFK
EGVASGNLNTMFEYTFDYQMTPTKVKVHMKKALSGDSYWVFVKRV
MEHVAFGSEDIENTLAKMDDSQLDNLAFGAIQLDGDGTILQYNAAEGDITGRNPKEVIGKNFFKDVAPCTDSPEFSGKFK
EGVASGNLNTMFEYTFDYQMTPTKVKVHMKKALSGDSYWVFVKRV
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Halorhodospira
Escherichia
sample
PYP
1053
Halorhodospira halophila
562
Escherichia coli
SL-1
1
2.05
39.88
VAPOR DIFFUSION, HANGING DROP
9.5
PEG 4000, MgCl2, Tris, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 110K
exptl_crystal_grow
software
struct_conn
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Experimental preparation
Data collection
Derived calculations
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2004-05-11
1
1
2008-04-29
1
2
2011-07-13
1
3
2018-01-31
1
4
2019-07-24
1
5
2023-08-16
_exptl_crystal_grow.temp
_software.classification
_software.name
_struct_conn.pdbx_leaving_atom_flag
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Photoactive Yellow Protein, Dark State (Unbleached)
E46Q Mutant of Photoactive Yellow Protein, P63 AT 295K
Wild Type Photoactive Yellow Protein, P63 AT 295K
E46Q mutant of photoactive yellow protein, P65 at 110K
E46Q mutant of photoactive yellow protein, P65 at 295K
SEQRES
Author states the sequence from the PYP was cloned from the strain SL-1 of
Ectothiorhodospira halophila, and there was no appropriate sequence database reference
available at the time of processing.
RCSB
Y
RCSB
2003-03-21
REL
REL
HC4
4'-HYDROXYCINNAMIC ACID
HOH
water
2PHY
PDB ENTRY 2PHY
PDB
experimental model
HC4
169
2
HC4
HC4
169
A
HC4
170
2
HC4
HC4
170
A
HC4
169
2
HC4
HC4
169
B
HC4
170
2
HC4
HC4
170
B
HOH
1002
3
HOH
HOH
1002
A
HOH
1004
3
HOH
HOH
1004
A
HOH
1005
3
HOH
HOH
1005
A
HOH
1006
3
HOH
HOH
1006
A
HOH
1009
3
HOH
HOH
1009
A
HOH
1013
3
HOH
HOH
1013
A
HOH
1014
3
HOH
HOH
1014
A
HOH
1016
3
HOH
HOH
1016
A
HOH
1017
3
HOH
HOH
1017
A
HOH
1019
3
HOH
HOH
1019
A
HOH
1026
3
HOH
HOH
1026
A
HOH
1027
3
HOH
HOH
1027
A
HOH
1029
3
HOH
HOH
1029
A
HOH
1033
3
HOH
HOH
1033
A
HOH
1034
3
HOH
HOH
1034
A
HOH
1041
3
HOH
HOH
1041
A
HOH
1043
3
HOH
HOH
1043
A
HOH
1044
3
HOH
HOH
1044
A
HOH
1045
3
HOH
HOH
1045
A
HOH
1048
3
HOH
HOH
1048
A
HOH
1049
3
HOH
HOH
1049
A
HOH
1053
3
HOH
HOH
1053
A
HOH
1055
3
HOH
HOH
1055
A
HOH
1057
3
HOH
HOH
1057
A
HOH
1060
3
HOH
HOH
1060
A
HOH
1061
3
HOH
HOH
1061
A
HOH
1063
3
HOH
HOH
1063
A
HOH
1064
3
HOH
HOH
1064
A
HOH
1067
3
HOH
HOH
1067
A
HOH
1069
3
HOH
HOH
1069
A
HOH
1070
3
HOH
HOH
1070
A
HOH
1072
3
HOH
HOH
1072
A
HOH
1075
3
HOH
HOH
1075
A
HOH
1077
3
HOH
HOH
1077
A
HOH
1080
3
HOH
HOH
1080
A
HOH
1082
3
HOH
HOH
1082
A
HOH
1084
3
HOH
HOH
1084
A
HOH
1085
3
HOH
HOH
1085
A
HOH
1086
3
HOH
HOH
1086
A
HOH
1088
3
HOH
HOH
1088
A
HOH
1091
3
HOH
HOH
1091
A
HOH
1092
3
HOH
HOH
1092
A
HOH
1093
3
HOH
HOH
1093
A
HOH
1094
3
HOH
HOH
1094
A
HOH
1097
3
HOH
HOH
1097
A
HOH
1099
3
HOH
HOH
1099
A
HOH
1104
3
HOH
HOH
1104
A
HOH
1105
3
HOH
HOH
1105
A
HOH
1108
3
HOH
HOH
1108
A
HOH
1113
3
HOH
HOH
1113
A
HOH
1117
3
HOH
HOH
1117
A
HOH
1121
3
HOH
HOH
1121
A
HOH
1122
3
HOH
HOH
1122
A
HOH
1125
3
HOH
HOH
1125
A
HOH
1127
3
HOH
HOH
1127
A
HOH
1130
3
HOH
HOH
1130
A
HOH
1131
3
HOH
HOH
1131
A
HOH
1132
3
HOH
HOH
1132
A
HOH
1134
3
HOH
HOH
1134
A
HOH
1135
3
HOH
HOH
1135
A
HOH
1136
3
HOH
HOH
1136
A
HOH
1137
3
HOH
HOH
1137
A
HOH
1138
3
HOH
HOH
1138
A
HOH
1140
3
HOH
HOH
1140
A
HOH
1141
3
HOH
HOH
1141
A
HOH
1144
3
HOH
HOH
1144
A
HOH
1145
3
HOH
HOH
1145
A
HOH
1148
3
HOH
HOH
1148
A
HOH
1149
3
HOH
HOH
1149
A
HOH
1150
3
HOH
HOH
1150
A
HOH
1154
3
HOH
HOH
1154
A
HOH
1156
3
HOH
HOH
1156
A
HOH
1157
3
HOH
HOH
1157
A
HOH
1159
3
HOH
HOH
1159
A
HOH
1160
3
HOH
HOH
1160
A
HOH
1162
3
HOH
HOH
1162
A
HOH
1164
3
HOH
HOH
1164
A
HOH
1167
3
HOH
HOH
1167
A
HOH
1170
3
HOH
HOH
1170
A
HOH
1172
3
HOH
HOH
1172
A
HOH
1175
3
HOH
HOH
1175
A
HOH
1177
3
HOH
HOH
1177
A
HOH
1178
3
HOH
HOH
1178
A
HOH
1180
3
HOH
HOH
1180
A
HOH
1183
3
HOH
HOH
1183
A
HOH
1185
3
HOH
HOH
1185
A
HOH
1186
3
HOH
HOH
1186
A
HOH
1187
3
HOH
HOH
1187
A
HOH
1189
3
HOH
HOH
1189
A
HOH
1190
3
HOH
HOH
1190
A
HOH
1191
3
HOH
HOH
1191
A
HOH
1192
3
HOH
HOH
1192
A
HOH
1193
3
HOH
HOH
1193
A
HOH
1194
3
HOH
HOH
1194
A
HOH
1195
3
HOH
HOH
1195
A
HOH
1197
3
HOH
HOH
1197
A
HOH
1198
3
HOH
HOH
1198
A
HOH
1199
3
HOH
HOH
1199
A
HOH
1200
3
HOH
HOH
1200
A
HOH
1202
3
HOH
HOH
1202
A
HOH
1204
3
HOH
HOH
1204
A
HOH
1205
3
HOH
HOH
1205
A
HOH
1206
3
HOH
HOH
1206
A
HOH
1209
3
HOH
HOH
1209
A
HOH
1212
3
HOH
HOH
1212
A
HOH
1218
3
HOH
HOH
1218
A
HOH
1220
3
HOH
HOH
1220
A
HOH
1221
3
HOH
HOH
1221
A
HOH
1223
3
HOH
HOH
1223
A
HOH
1224
3
HOH
HOH
1224
A
HOH
1001
3
HOH
HOH
1001
B
HOH
1003
3
HOH
HOH
1003
B
HOH
1007
3
HOH
HOH
1007
B
HOH
1008
3
HOH
HOH
1008
B
HOH
1010
3
HOH
HOH
1010
B
HOH
1011
3
HOH
HOH
1011
B
HOH
1012
3
HOH
HOH
1012
B
HOH
1015
3
HOH
HOH
1015
B
HOH
1018
3
HOH
HOH
1018
B
HOH
1020
3
HOH
HOH
1020
B
HOH
1021
3
HOH
HOH
1021
B
HOH
1022
3
HOH
HOH
1022
B
HOH
1023
3
HOH
HOH
1023
B
HOH
1024
3
HOH
HOH
1024
B
HOH
1025
3
HOH
HOH
1025
B
HOH
1028
3
HOH
HOH
1028
B
HOH
1030
3
HOH
HOH
1030
B
HOH
1031
3
HOH
HOH
1031
B
HOH
1032
3
HOH
HOH
1032
B
HOH
1035
3
HOH
HOH
1035
B
HOH
1036
3
HOH
HOH
1036
B
HOH
1037
3
HOH
HOH
1037
B
HOH
1038
3
HOH
HOH
1038
B
HOH
1039
3
HOH
HOH
1039
B
HOH
1040
3
HOH
HOH
1040
B
HOH
1042
3
HOH
HOH
1042
B
HOH
1046
3
HOH
HOH
1046
B
HOH
1047
3
HOH
HOH
1047
B
HOH
1050
3
HOH
HOH
1050
B
HOH
1051
3
HOH
HOH
1051
B
HOH
1052
3
HOH
HOH
1052
B
HOH
1054
3
HOH
HOH
1054
B
HOH
1056
3
HOH
HOH
1056
B
HOH
1058
3
HOH
HOH
1058
B
HOH
1059
3
HOH
HOH
1059
B
HOH
1062
3
HOH
HOH
1062
B
HOH
1065
3
HOH
HOH
1065
B
HOH
1066
3
HOH
HOH
1066
B
HOH
1068
3
HOH
HOH
1068
B
HOH
1071
3
HOH
HOH
1071
B
HOH
1073
3
HOH
HOH
1073
B
HOH
1074
3
HOH
HOH
1074
B
HOH
1076
3
HOH
HOH
1076
B
HOH
1078
3
HOH
HOH
1078
B
HOH
1079
3
HOH
HOH
1079
B
HOH
1081
3
HOH
HOH
1081
B
HOH
1083
3
HOH
HOH
1083
B
HOH
1087
3
HOH
HOH
1087
B
HOH
1089
3
HOH
HOH
1089
B
HOH
1090
3
HOH
HOH
1090
B
HOH
1095
3
HOH
HOH
1095
B
HOH
1096
3
HOH
HOH
1096
B
HOH
1098
3
HOH
HOH
1098
B
HOH
1100
3
HOH
HOH
1100
B
HOH
1101
3
HOH
HOH
1101
B
HOH
1102
3
HOH
HOH
1102
B
HOH
1103
3
HOH
HOH
1103
B
HOH
1106
3
HOH
HOH
1106
B
HOH
1107
3
HOH
HOH
1107
B
HOH
1109
3
HOH
HOH
1109
B
HOH
1110
3
HOH
HOH
1110
B
HOH
1111
3
HOH
HOH
1111
B
HOH
1112
3
HOH
HOH
1112
B
HOH
1114
3
HOH
HOH
1114
B
HOH
1115
3
HOH
HOH
1115
B
HOH
1116
3
HOH
HOH
1116
B
HOH
1118
3
HOH
HOH
1118
B
HOH
1119
3
HOH
HOH
1119
B
HOH
1120
3
HOH
HOH
1120
B
HOH
1123
3
HOH
HOH
1123
B
HOH
1124
3
HOH
HOH
1124
B
HOH
1126
3
HOH
HOH
1126
B
HOH
1128
3
HOH
HOH
1128
B
HOH
1129
3
HOH
HOH
1129
B
HOH
1133
3
HOH
HOH
1133
B
HOH
1139
3
HOH
HOH
1139
B
HOH
1142
3
HOH
HOH
1142
B
HOH
1143
3
HOH
HOH
1143
B
HOH
1146
3
HOH
HOH
1146
B
HOH
1147
3
HOH
HOH
1147
B
HOH
1151
3
HOH
HOH
1151
B
HOH
1152
3
HOH
HOH
1152
B
HOH
1153
3
HOH
HOH
1153
B
HOH
1155
3
HOH
HOH
1155
B
HOH
1158
3
HOH
HOH
1158
B
HOH
1161
3
HOH
HOH
1161
B
HOH
1163
3
HOH
HOH
1163
B
HOH
1165
3
HOH
HOH
1165
B
HOH
1166
3
HOH
HOH
1166
B
HOH
1168
3
HOH
HOH
1168
B
HOH
1169
3
HOH
HOH
1169
B
HOH
1171
3
HOH
HOH
1171
B
HOH
1173
3
HOH
HOH
1173
B
HOH
1174
3
HOH
HOH
1174
B
HOH
1176
3
HOH
HOH
1176
B
HOH
1179
3
HOH
HOH
1179
B
HOH
1181
3
HOH
HOH
1181
B
HOH
1182
3
HOH
HOH
1182
B
HOH
1184
3
HOH
HOH
1184
B
HOH
1188
3
HOH
HOH
1188
B
HOH
1196
3
HOH
HOH
1196
B
HOH
1201
3
HOH
HOH
1201
B
HOH
1203
3
HOH
HOH
1203
B
HOH
1207
3
HOH
HOH
1207
B
HOH
1208
3
HOH
HOH
1208
B
HOH
1210
3
HOH
HOH
1210
B
HOH
1211
3
HOH
HOH
1211
B
HOH
1213
3
HOH
HOH
1213
B
HOH
1214
3
HOH
HOH
1214
B
HOH
1215
3
HOH
HOH
1215
B
HOH
1216
3
HOH
HOH
1216
B
HOH
1217
3
HOH
HOH
1217
B
HOH
1219
3
HOH
HOH
1219
B
HOH
1222
3
HOH
HOH
1222
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
n
11
11
A
n
12
12
A
n
13
13
A
n
14
14
A
n
15
15
A
n
16
16
A
n
17
17
A
n
18
18
A
n
19
19
A
n
20
20
A
SER
21
n
21
SER
21
A
GLN
22
n
22
GLN
22
A
LEU
23
n
23
LEU
23
A
ASP
24
n
24
ASP
24
A
ASN
25
n
25
ASN
25
A
LEU
26
n
26
LEU
26
A
ALA
27
n
27
ALA
27
A
PHE
28
n
28
PHE
28
A
GLY
29
n
29
GLY
29
A
ALA
30
n
30
ALA
30
A
ILE
31
n
31
ILE
31
A
GLN
32
n
32
GLN
32
A
LEU
33
n
33
LEU
33
A
ASP
34
n
34
ASP
34
A
GLY
35
n
35
GLY
35
A
ASP
36
n
36
ASP
36
A
GLY
37
n
37
GLY
37
A
THR
38
n
38
THR
38
A
ILE
39
n
39
ILE
39
A
LEU
40
n
40
LEU
40
A
GLN
41
n
41
GLN
41
A
TYR
42
n
42
TYR
42
A
ASN
43
n
43
ASN
43
A
ALA
44
n
44
ALA
44
A
ALA
45
n
45
ALA
45
A
GLU
46
n
46
GLU
46
A
GLY
47
n
47
GLY
47
A
ASP
48
n
48
ASP
48
A
ILE
49
n
49
ILE
49
A
THR
50
n
50
THR
50
A
GLY
51
n
51
GLY
51
A
ARG
52
n
52
ARG
52
A
ASN
53
n
53
ASN
53
A
PRO
54
n
54
PRO
54
A
LYS
55
n
55
LYS
55
A
GLU
56
n
56
GLU
56
A
VAL
57
n
57
VAL
57
A
ILE
58
n
58
ILE
58
A
GLY
59
n
59
GLY
59
A
LYS
60
n
60
LYS
60
A
ASN
61
n
61
ASN
61
A
PHE
62
n
62
PHE
62
A
PHE
63
n
63
PHE
63
A
LYS
64
n
64
LYS
64
A
ASP
65
n
65
ASP
65
A
VAL
66
n
66
VAL
66
A
ALA
67
n
67
ALA
67
A
PRO
68
n
68
PRO
68
A
CYS
69
n
69
CYS
69
A
THR
70
n
70
THR
70
A
ASP
71
n
71
ASP
71
A
SER
72
n
72
SER
72
A
PRO
73
n
73
PRO
73
A
GLU
74
n
74
GLU
74
A
PHE
75
n
75
PHE
75
A
SER
76
n
76
SER
76
A
GLY
77
n
77
GLY
77
A
LYS
78
n
78
LYS
78
A
PHE
79
n
79
PHE
79
A
LYS
80
n
80
LYS
80
A
GLU
81
n
81
GLU
81
A
GLY
82
n
82
GLY
82
A
VAL
83
n
83
VAL
83
A
ALA
84
n
84
ALA
84
A
SER
85
n
85
SER
85
A
GLY
86
n
86
GLY
86
A
ASN
87
n
87
ASN
87
A
LEU
88
n
88
LEU
88
A
ASN
89
n
89
ASN
89
A
THR
90
n
90
THR
90
A
MET
91
n
91
MET
91
A
PHE
92
n
92
PHE
92
A
GLU
93
n
93
GLU
93
A
TYR
94
n
94
TYR
94
A
THR
95
n
95
THR
95
A
PHE
96
n
96
PHE
96
A
ASP
97
n
97
ASP
97
A
TYR
98
n
98
TYR
98
A
GLN
99
n
99
GLN
99
A
MET
100
n
100
MET
100
A
THR
101
n
101
THR
101
A
PRO
102
n
102
PRO
102
A
THR
103
n
103
THR
103
A
LYS
104
n
104
LYS
104
A
VAL
105
n
105
VAL
105
A
LYS
106
n
106
LYS
106
A
VAL
107
n
107
VAL
107
A
HIS
108
n
108
HIS
108
A
MET
109
n
109
MET
109
A
LYS
110
n
110
LYS
110
A
LYS
111
n
111
LYS
111
A
ALA
112
n
112
ALA
112
A
LEU
113
n
113
LEU
113
A
SER
114
n
114
SER
114
A
GLY
115
n
115
GLY
115
A
ASP
116
n
116
ASP
116
A
SER
117
n
117
SER
117
A
TYR
118
n
118
TYR
118
A
TRP
119
n
119
TRP
119
A
VAL
120
n
120
VAL
120
A
PHE
121
n
121
PHE
121
A
VAL
122
n
122
VAL
122
A
LYS
123
n
123
LYS
123
A
ARG
124
n
124
ARG
124
A
VAL
125
n
125
VAL
125
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
n
7
7
B
n
8
8
B
n
9
9
B
n
10
10
B
n
11
11
B
n
12
12
B
n
13
13
B
n
14
14
B
n
15
15
B
n
16
16
B
n
17
17
B
n
18
18
B
n
19
19
B
n
20
20
B
SER
21
n
21
SER
21
B
GLN
22
n
22
GLN
22
B
LEU
23
n
23
LEU
23
B
ASP
24
n
24
ASP
24
B
ASN
25
n
25
ASN
25
B
LEU
26
n
26
LEU
26
B
ALA
27
n
27
ALA
27
B
PHE
28
n
28
PHE
28
B
GLY
29
n
29
GLY
29
B
ALA
30
n
30
ALA
30
B
ILE
31
n
31
ILE
31
B
GLN
32
n
32
GLN
32
B
LEU
33
n
33
LEU
33
B
ASP
34
n
34
ASP
34
B
GLY
35
n
35
GLY
35
B
ASP
36
n
36
ASP
36
B
GLY
37
n
37
GLY
37
B
THR
38
n
38
THR
38
B
ILE
39
n
39
ILE
39
B
LEU
40
n
40
LEU
40
B
GLN
41
n
41
GLN
41
B
TYR
42
n
42
TYR
42
B
ASN
43
n
43
ASN
43
B
ALA
44
n
44
ALA
44
B
ALA
45
n
45
ALA
45
B
GLU
46
n
46
GLU
46
B
GLY
47
n
47
GLY
47
B
ASP
48
n
48
ASP
48
B
ILE
49
n
49
ILE
49
B
THR
50
n
50
THR
50
B
GLY
51
n
51
GLY
51
B
ARG
52
n
52
ARG
52
B
ASN
53
n
53
ASN
53
B
PRO
54
n
54
PRO
54
B
LYS
55
n
55
LYS
55
B
GLU
56
n
56
GLU
56
B
VAL
57
n
57
VAL
57
B
ILE
58
n
58
ILE
58
B
GLY
59
n
59
GLY
59
B
LYS
60
n
60
LYS
60
B
ASN
61
n
61
ASN
61
B
PHE
62
n
62
PHE
62
B
PHE
63
n
63
PHE
63
B
LYS
64
n
64
LYS
64
B
ASP
65
n
65
ASP
65
B
VAL
66
n
66
VAL
66
B
ALA
67
n
67
ALA
67
B
PRO
68
n
68
PRO
68
B
CYS
69
n
69
CYS
69
B
THR
70
n
70
THR
70
B
ASP
71
n
71
ASP
71
B
SER
72
n
72
SER
72
B
PRO
73
n
73
PRO
73
B
GLU
74
n
74
GLU
74
B
PHE
75
n
75
PHE
75
B
SER
76
n
76
SER
76
B
GLY
77
n
77
GLY
77
B
LYS
78
n
78
LYS
78
B
PHE
79
n
79
PHE
79
B
LYS
80
n
80
LYS
80
B
GLU
81
n
81
GLU
81
B
GLY
82
n
82
GLY
82
B
VAL
83
n
83
VAL
83
B
ALA
84
n
84
ALA
84
B
SER
85
n
85
SER
85
B
GLY
86
n
86
GLY
86
B
ASN
87
n
87
ASN
87
B
LEU
88
n
88
LEU
88
B
ASN
89
n
89
ASN
89
B
THR
90
n
90
THR
90
B
MET
91
n
91
MET
91
B
PHE
92
n
92
PHE
92
B
GLU
93
n
93
GLU
93
B
TYR
94
n
94
TYR
94
B
THR
95
n
95
THR
95
B
PHE
96
n
96
PHE
96
B
ASP
97
n
97
ASP
97
B
TYR
98
n
98
TYR
98
B
GLN
99
n
99
GLN
99
B
MET
100
n
100
MET
100
B
THR
101
n
101
THR
101
B
PRO
102
n
102
PRO
102
B
THR
103
n
103
THR
103
B
LYS
104
n
104
LYS
104
B
VAL
105
n
105
VAL
105
B
LYS
106
n
106
LYS
106
B
VAL
107
n
107
VAL
107
B
HIS
108
n
108
HIS
108
B
MET
109
n
109
MET
109
B
LYS
110
n
110
LYS
110
B
LYS
111
n
111
LYS
111
B
ALA
112
n
112
ALA
112
B
LEU
113
n
113
LEU
113
B
SER
114
n
114
SER
114
B
GLY
115
n
115
GLY
115
B
ASP
116
n
116
ASP
116
B
SER
117
n
117
SER
117
B
TYR
118
n
118
TYR
118
B
TRP
119
n
119
TRP
119
B
VAL
120
n
120
VAL
120
B
PHE
121
n
121
PHE
121
B
VAL
122
n
122
VAL
122
B
LYS
123
n
123
LYS
123
B
ARG
124
n
124
ARG
124
B
VAL
125
n
125
VAL
125
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
40
A
O
LEU
40
A
N
GLN
32
A
N
GLN
32
A
N
LEU
33
A
N
LEU
33
A
O
TYR
118
A
O
TYR
118
A
O
PHE
121
A
O
PHE
121
A
N
HIS
108
A
N
HIS
108
A
O
VAL
105
A
O
VAL
105
A
N
TYR
94
A
N
TYR
94
B
O
LEU
40
B
O
LEU
40
B
N
GLN
32
B
N
GLN
32
B
N
LEU
33
B
N
LEU
33
B
O
TYR
118
B
O
TYR
118
B
O
LYS
123
B
O
LYS
123
B
N
LYS
106
B
N
LYS
106
B
O
VAL
107
B
O
VAL
107
B
N
PHE
92
B
N
PHE
92
1
A
MET
1
A
MET
1
1
Y
1
A
GLU
2
A
GLU
2
1
Y
1
A
HIS
3
A
HIS
3
1
Y
1
A
VAL
4
A
VAL
4
1
Y
1
A
ALA
5
A
ALA
5
1
Y
1
A
PHE
6
A
PHE
6
1
Y
1
A
GLY
7
A
GLY
7
1
Y
1
A
SER
8
A
SER
8
1
Y
1
A
GLU
9
A
GLU
9
1
Y
1
A
ASP
10
A
ASP
10
1
Y
1
A
ILE
11
A
ILE
11
1
Y
1
A
GLU
12
A
GLU
12
1
Y
1
A
ASN
13
A
ASN
13
1
Y
1
A
THR
14
A
THR
14
1
Y
1
A
LEU
15
A
LEU
15
1
Y
1
A
ALA
16
A
ALA
16
1
Y
1
A
LYS
17
A
LYS
17
1
Y
1
A
MET
18
A
MET
18
1
Y
1
A
ASP
19
A
ASP
19
1
Y
1
A
ASP
20
A
ASP
20
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
GLU
2
B
GLU
2
1
Y
1
B
HIS
3
B
HIS
3
1
Y
1
B
VAL
4
B
VAL
4
1
Y
1
B
ALA
5
B
ALA
5
1
Y
1
B
PHE
6
B
PHE
6
1
Y
1
B
GLY
7
B
GLY
7
1
Y
1
B
SER
8
B
SER
8
1
Y
1
B
GLU
9
B
GLU
9
1
Y
1
B
ASP
10
B
ASP
10
1
Y
1
B
ILE
11
B
ILE
11
1
Y
1
B
GLU
12
B
GLU
12
1
Y
1
B
ASN
13
B
ASN
13
1
Y
1
B
THR
14
B
THR
14
1
Y
1
B
LEU
15
B
LEU
15
1
Y
1
B
ALA
16
B
ALA
16
1
Y
1
B
LYS
17
B
LYS
17
1
Y
1
B
MET
18
B
MET
18
1
Y
1
B
ASP
19
B
ASP
19
1
Y
1
B
ASP
20
B
ASP
20
1
Y
1
B
B
NZ
C2
LYS
HC4
110
170
2.17
1
-4.32
0.70
120.80
116.48
A
A
A
CB
CG
CD2
PHE
PHE
PHE
28
28
28
N
1
5.84
0.90
118.30
124.14
A
A
A
CB
CG
OD1
ASP
ASP
ASP
34
34
34
N
1
4.33
0.50
120.30
124.63
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
52
52
52
N
1
10.54
1.10
119.40
129.94
A
A
A
NH1
CZ
NH2
ARG
ARG
ARG
124
124
124
N
1
-3.13
0.50
120.30
117.17
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
124
124
124
N
1
-7.46
0.50
120.30
112.84
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
124
124
124
N
1
16.53
2.70
114.20
130.73
B
B
B
CB
CG
CD
GLU
GLU
GLU
56
56
56
N
1
6.42
0.90
118.30
124.72
B
B
B
CB
CG
OD1
ASP
ASP
ASP
65
65
65
N
1
6.25
0.70
120.80
127.05
B
B
B
CB
CG
CD1
PHE
PHE
PHE
75
75
75
N
1
4.36
0.60
121.00
125.36
B
B
B
CB
CG
CD2
TYR
TYR
TYR
98
98
98
N
1
A
A
C
OXT
VAL
VAL
125
125
0.204
0.019
1.229
1.433
N
1
B
B
C
OXT
VAL
VAL
125
125
0.189
0.019
1.229
1.418
N
1
A
ASP
65
-121.87
-59.00
1
A
PHE
75
-119.75
-85.72
1
A
ASN
89
-164.78
97.98
1
A
ASP
97
-145.75
15.91
1
B
PHE
75
-123.82
-80.55
1
B
ASN
89
-164.14
98.90
1
B
ASP
97
-148.05
15.94
0.215
0.167
0.171
0.171
1.25
20.0
2777
61494
55363
RANDOM
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
PDB ENTRY 2PHY
derived from 1.0A (110K) wild type ground state structure
1.25
20.0
224
1908
44
0
1640
0.016
2.61
1.25
100.00
1OTD
61494
61494
2
2
0.061
1
16.3
6.3
90.3
0.4
1.25
1.29
2.0
56.9
refinement
SHELXL-97
data scaling
SCALEPACK
refinement
CNS
data reduction
DENZO
phasing
CNS
STRONG HYDROGEN BONDS IN PHOTOACTIVE YELLOW PROTEIN AND THEIR ROLE IN ITS PHOTOCYCLE
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
ASN
43
A
ASN
43
HELX_P
A
GLY
51
A
GLY
51
1
1
9
A
ASN
53
A
ASN
53
HELX_P
A
ILE
58
A
ILE
58
1
2
6
A
ALA
67
A
ALA
67
HELX_P
A
ASP
71
A
ASP
71
5
3
5
A
PHE
75
A
PHE
75
HELX_P
A
GLY
86
A
GLY
86
1
4
12
B
ASN
43
B
ASN
43
HELX_P
B
GLY
51
B
GLY
51
1
5
9
B
ASN
53
B
ASN
53
HELX_P
B
ILE
58
B
ILE
58
1
6
6
B
ALA
67
B
ALA
67
HELX_P
B
ASP
71
B
ASP
71
5
7
5
B
PHE
75
B
PHE
75
HELX_P
B
GLY
86
B
GLY
86
1
8
12
covale
1.775
one
A
CYS
69
A
SG
CYS
69
1_555
A
HC4
169
C
C1
HC4
1_555
covale
1.331
one
A
LYS
110
A
NZ
LYS
110
1_555
A
HC4
170
D
C1
HC4
1_555
covale
1.775
one
B
CYS
69
B
SG
CYS
69
1_555
B
HC4
169
E
C1
HC4
1_555
covale
1.378
one
B
LYS
110
B
NZ
LYS
110
1_555
B
HC4
170
F
C1
HC4
1_555
SIGNALING PROTEIN
PYP, SIGNALING PROTEIN
PYP_ECTHA
UNP
1
1
P16113
1
125
1OTD
1
125
P16113
A
1
1
125
1
125
1OTD
1
125
P16113
B
1
1
125
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
39
A
ILE
39
A
TYR
42
A
TYR
42
A
GLY
29
A
GLY
29
A
LEU
33
A
LEU
33
A
TYR
118
A
TYR
118
A
ARG
124
A
ARG
124
A
THR
103
A
THR
103
A
LYS
111
A
LYS
111
A
ASN
89
A
ASN
89
A
PHE
96
A
PHE
96
B
ILE
39
B
ILE
39
B
TYR
42
B
TYR
42
B
GLY
29
B
GLY
29
B
LEU
33
B
LEU
33
B
TYR
118
B
TYR
118
B
ARG
124
B
ARG
124
B
THR
103
B
THR
103
B
LYS
111
B
LYS
111
B
ASN
89
B
ASN
89
B
PHE
96
B
PHE
96
BINDING SITE FOR RESIDUE HC4 A 169
A
HC4
169
Software
10
BINDING SITE FOR RESIDUE HC4 A 170
A
HC4
170
Software
7
BINDING SITE FOR RESIDUE HC4 B 169
B
HC4
169
Software
11
BINDING SITE FOR RESIDUE HC4 B 170
B
HC4
170
Software
7
A
TYR
42
A
TYR
42
10
1_555
A
GLU
46
A
GLU
46
10
1_555
A
THR
50
A
THR
50
10
1_555
A
ARG
52
A
ARG
52
10
1_555
A
VAL
66
A
VAL
66
10
1_555
A
ALA
67
A
ALA
67
10
1_555
A
PRO
68
A
PRO
68
10
1_555
A
CYS
69
A
CYS
69
10
1_555
A
PHE
96
A
PHE
96
10
1_555
A
TYR
98
A
TYR
98
10
1_555
A
ASN
89
A
ASN
89
7
1_555
A
HIS
108
A
HIS
108
7
1_555
A
LYS
110
A
LYS
110
7
1_555
A
HOH
1009
G
HOH
7
1_555
B
PHE
28
B
PHE
28
7
1_555
B
HIS
108
B
HIS
108
7
1_555
B
PHE
121
B
PHE
121
7
1_555
B
TYR
42
B
TYR
42
11
1_555
B
GLU
46
B
GLU
46
11
1_555
B
THR
50
B
THR
50
11
1_555
B
ARG
52
B
ARG
52
11
1_555
B
PHE
62
B
PHE
62
11
1_555
B
VAL
66
B
VAL
66
11
1_555
B
ALA
67
B
ALA
67
11
1_555
B
PRO
68
B
PRO
68
11
1_555
B
CYS
69
B
CYS
69
11
1_555
B
PHE
96
B
PHE
96
11
1_555
B
TYR
98
B
TYR
98
11
1_555
A
LEU
26
A
LEU
26
7
1_555
A
PHE
28
A
PHE
28
7
1_555
A
HIS
108
A
HIS
108
7
1_555
A
PHE
121
A
PHE
121
7
1_555
B
ASN
89
B
ASN
89
7
1_555
B
HIS
108
B
HIS
108
7
1_555
B
LYS
110
B
LYS
110
7
1_555
4
P 1 21 1