0.008703
0.000000
0.000000
0.000000
0.008425
0.000000
0.000000
0.000000
0.009166
0.00000
0.00000
0.00000
Champness, J.N.
Bennett, M.S.
Wien, F.
Brown, D.G.
Visse, R.
Sandhu, G.
Davies, A.
Rizkallah, P.J.
Melitz, C.
Summers, W.C.
Sanderson, M.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
114.900
118.700
109.100
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C9 H13 N5 O4
255.231
9-(1,3-DIHYDROXY-PROPOXYMETHANE)GUANINE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
N
C
Y
90
N
C
Y
91
N
C
N
92
N
C
N
93
N
O
N
94
N
C
N
95
N
O
N
96
N
C
N
97
N
O
N
98
N
C
Y
99
N
N
N
100
N
N
N
101
N
N
N
102
N
C
N
103
N
O
Y
104
N
C
Y
105
N
N
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
N
N
120
S
C
N
121
N
C
N
122
N
O
N
123
N
C
N
124
N
C
N
125
N
C
N
126
N
O
N
127
N
N
N
128
N
O
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
N
N
140
S
C
N
141
N
C
N
142
N
O
N
143
N
C
N
144
N
C
N
145
N
C
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
N
C
N
160
N
C
N
161
N
O
N
162
N
O
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
N
N
169
S
C
N
170
N
C
N
171
N
O
N
172
N
C
Y
173
N
C
Y
174
N
N
Y
175
N
C
Y
176
N
C
Y
177
N
N
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
S
C
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
N
N
215
S
C
N
216
N
C
N
217
N
O
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
N
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
N
N
262
S
C
N
263
N
C
N
264
N
O
N
265
N
C
N
266
N
C
N
267
N
S
N
268
N
C
N
269
N
O
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
N
292
N
O
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
C
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
N
326
N
O
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
S
N
336
N
O
N
337
N
O
N
338
N
O
N
339
N
O
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
R
C
N
345
N
O
N
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
N
N
358
S
C
N
359
N
C
N
360
N
O
N
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
N
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
N
395
N
O
N
396
N
O
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
N
N
409
S
C
N
410
N
C
N
411
N
O
N
412
N
C
N
413
N
C
N
414
N
C
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
Y
88
N
sing
N
89
N
sing
Y
90
N
doub
Y
91
N
sing
Y
92
N
doub
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
Y
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
Y
172
N
sing
Y
173
N
doub
Y
174
N
doub
N
175
N
sing
Y
176
N
sing
N
177
N
sing
Y
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
doub
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
Y
280
N
doub
Y
281
N
sing
Y
282
N
sing
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
doub
N
287
N
sing
Y
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
doub
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
Y
353
N
doub
Y
354
N
sing
Y
355
N
sing
N
356
N
sing
Y
357
N
doub
Y
358
N
sing
Y
359
N
sing
N
360
N
sing
Y
361
N
sing
Y
362
N
doub
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
Y
381
N
doub
Y
382
N
sing
Y
383
N
sing
N
384
N
sing
Y
385
N
doub
N
386
N
sing
Y
387
N
doub
N
388
N
sing
Y
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
US
Proteins
PSFGEY
0867
0887-3585
32
350
361
10.1002/(SICI)1097-0134(19980815)32:3<350::AID-PROT10>3.0.CO;2-8
9715911
Exploring the active site of herpes simplex virus type-1 thymidine kinase by X-ray crystallography of complexes with aciclovir and other ligands.
1998
US
Yale J.Biol.Med.
YJBMAU
2175
0044-0086
69
495
3'-Amino Thymidine Affinity Matrix for the Purification of Herpes Simplex Virus Thymidine Kinase
1996
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
2
876
Crystal Structures of the Thymidine Kinase from Herpes Simplex Virus Type-1 in Complex with Deoxythymidine and Ganciclovir
1995
US
J.Gen.Virol.
JGVIAY
2058
0022-1317
69
1531
The Complete DNA Sequence of the Long Unique Region in the Genome of Herpes Simplex Virus Type 1
1988
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
202
917
Purification and Crystallization of Thymidine Kinase from Herpes Simplex Virus Type 1
1988
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
78
1441
Nucleotide Sequence of the Thymidine Kinase Gene of Herpes Simplex Virus Type 1
1981
10.2210/pdb1ki2/pdb
pdb_00001ki2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
MIRRORS
IMAGE PLATE
1995-04
RIGAKU RAXIS IIC
OTWINOWSKI MIRRORS
M
x-ray
1
1.5418
1.0
1.5418
35779.086
THYMIDINE KINASE
2.7.1.21
2
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
255.231
9-(1,3-DIHYDROXY-PROPOXYMETHANE)GUANINE
2
syn
non-polymer
18.015
water
209
nat
water
TK
no
no
MPTLLRVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIYTTQHRLDQGEISAGDAAVVMTSAQ
ITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAALLCYPAARYLMGSMTPQAVLAFVALIPPTLPGTNIVL
GALPEDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQLSGTAVPPQGAEPQSNAGPRPHIG
DTLFTLFRAPELLAPNGDLYNVFAWALDVLAKRLRSMHVFILDYDQSPAGCRDALLQLTSGMVQTHVTTPGSIPTICDLA
RTFAREMGEAN
MPTLLRVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIYTTQHRLDQGEISAGDAAVVMTSAQ
ITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAALLCYPAARYLMGSMTPQAVLAFVALIPPTLPGTNIVL
GALPEDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQLSGTAVPPQGAEPQSNAGPRPHIG
DTLFTLFRAPELLAPNGDLYNVFAWALDVLAKRLRSMHVFILDYDQSPAGCRDALLQLTSGMVQTHVTTPGSIPTICDLA
RTFAREMGEAN
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Simplexvirus
Human herpesvirus 1
17
Escherichia
sample
TK
10299
Herpes simplex virus (type 1 / strain 17)
TK
562
Escherichia coli
SY211
PT7\:HSVTK
1
2.60
45.8
VAPOR DIFFUSION, HANGING DROP
7.5
HANGING-DROP: 8ML PROTEIN SOLUTION PLUS 4ML PRECIPITATING SOLUTION EQUILIBRATED AGAINST PRECIPITATING SOLUTION AT 25O C. PROTEIN SOLUTION: HSV-TK 1.0MG/ML; 40MM TRIS-CL PH 7.5; 3MM DTT; 0.2MM DT. PRECIPITATING SOLUTION: 30% SATURATED AMMONIUM SULPHATE; 200MM TRIS-CL PH 6.75; 3MM DTT; 0.2 MM DT. THE EXCHANGE OF DEOXYTHYMIDINE BOUND TO THE PROTEIN FOR GANCICLOVIR WAS MADE BY WASHING THE CRYSTALS FIVE TIMES IN A 3 ML SOLUTION (33% SATURATED AMMONIUM SULPHATE; 100MM TRIS-CL PH 6.75) CONTAINING GANCICLOVIR., vapor diffusion - hanging drop
6.75-7.5
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1998-12-02
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1998-05-15
REL
REL
SO4
SULFATE ION
GA2
9-(1,3-DIHYDROXY-PROPOXYMETHANE)GUANINE
HOH
water
SO4
3
2
SO4
SO4
3
A
GA2
1
3
GA2
GA2
1
A
SO4
4
2
SO4
SO4
4
B
GA2
2
3
GA2
GA2
2
B
HOH
501
4
HOH
HOH
501
A
HOH
504
4
HOH
HOH
504
A
HOH
505
4
HOH
HOH
505
A
HOH
508
4
HOH
HOH
508
A
HOH
511
4
HOH
HOH
511
A
HOH
513
4
HOH
HOH
513
A
HOH
514
4
HOH
HOH
514
A
HOH
516
4
HOH
HOH
516
A
HOH
519
4
HOH
HOH
519
A
HOH
520
4
HOH
HOH
520
A
HOH
521
4
HOH
HOH
521
A
HOH
522
4
HOH
HOH
522
A
HOH
523
4
HOH
HOH
523
A
HOH
525
4
HOH
HOH
525
A
HOH
531
4
HOH
HOH
531
A
HOH
532
4
HOH
HOH
532
A
HOH
535
4
HOH
HOH
535
A
HOH
537
4
HOH
HOH
537
A
HOH
538
4
HOH
HOH
538
A
HOH
539
4
HOH
HOH
539
A
HOH
540
4
HOH
HOH
540
A
HOH
541
4
HOH
HOH
541
A
HOH
543
4
HOH
HOH
543
A
HOH
544
4
HOH
HOH
544
A
HOH
547
4
HOH
HOH
547
A
HOH
550
4
HOH
HOH
550
A
HOH
552
4
HOH
HOH
552
A
HOH
556
4
HOH
HOH
556
A
HOH
557
4
HOH
HOH
557
A
HOH
558
4
HOH
HOH
558
A
HOH
562
4
HOH
HOH
562
A
HOH
564
4
HOH
HOH
564
A
HOH
566
4
HOH
HOH
566
A
HOH
569
4
HOH
HOH
569
A
HOH
574
4
HOH
HOH
574
A
HOH
577
4
HOH
HOH
577
A
HOH
578
4
HOH
HOH
578
A
HOH
579
4
HOH
HOH
579
A
HOH
580
4
HOH
HOH
580
A
HOH
583
4
HOH
HOH
583
A
HOH
584
4
HOH
HOH
584
A
HOH
586
4
HOH
HOH
586
A
HOH
587
4
HOH
HOH
587
A
HOH
588
4
HOH
HOH
588
A
HOH
589
4
HOH
HOH
589
A
HOH
590
4
HOH
HOH
590
A
HOH
591
4
HOH
HOH
591
A
HOH
593
4
HOH
HOH
593
A
HOH
594
4
HOH
HOH
594
A
HOH
597
4
HOH
HOH
597
A
HOH
600
4
HOH
HOH
600
A
HOH
601
4
HOH
HOH
601
A
HOH
604
4
HOH
HOH
604
A
HOH
606
4
HOH
HOH
606
A
HOH
610
4
HOH
HOH
610
A
HOH
611
4
HOH
HOH
611
A
HOH
614
4
HOH
HOH
614
A
HOH
616
4
HOH
HOH
616
A
HOH
617
4
HOH
HOH
617
A
HOH
619
4
HOH
HOH
619
A
HOH
620
4
HOH
HOH
620
A
HOH
621
4
HOH
HOH
621
A
HOH
623
4
HOH
HOH
623
A
HOH
625
4
HOH
HOH
625
A
HOH
627
4
HOH
HOH
627
A
HOH
628
4
HOH
HOH
628
A
HOH
629
4
HOH
HOH
629
A
HOH
631
4
HOH
HOH
631
A
HOH
632
4
HOH
HOH
632
A
HOH
633
4
HOH
HOH
633
A
HOH
634
4
HOH
HOH
634
A
HOH
635
4
HOH
HOH
635
A
HOH
641
4
HOH
HOH
641
A
HOH
642
4
HOH
HOH
642
A
HOH
643
4
HOH
HOH
643
A
HOH
645
4
HOH
HOH
645
A
HOH
648
4
HOH
HOH
648
A
HOH
650
4
HOH
HOH
650
A
HOH
651
4
HOH
HOH
651
A
HOH
653
4
HOH
HOH
653
A
HOH
655
4
HOH
HOH
655
A
HOH
657
4
HOH
HOH
657
A
HOH
658
4
HOH
HOH
658
A
HOH
659
4
HOH
HOH
659
A
HOH
660
4
HOH
HOH
660
A
HOH
661
4
HOH
HOH
661
A
HOH
662
4
HOH
HOH
662
A
HOH
666
4
HOH
HOH
666
A
HOH
670
4
HOH
HOH
670
A
HOH
673
4
HOH
HOH
673
A
HOH
674
4
HOH
HOH
674
A
HOH
677
4
HOH
HOH
677
A
HOH
681
4
HOH
HOH
681
A
HOH
683
4
HOH
HOH
683
A
HOH
685
4
HOH
HOH
685
A
HOH
689
4
HOH
HOH
689
A
HOH
690
4
HOH
HOH
690
A
HOH
691
4
HOH
HOH
691
A
HOH
692
4
HOH
HOH
692
A
HOH
693
4
HOH
HOH
693
A
HOH
694
4
HOH
HOH
694
A
HOH
695
4
HOH
HOH
695
A
HOH
696
4
HOH
HOH
696
A
HOH
698
4
HOH
HOH
698
A
HOH
701
4
HOH
HOH
701
A
HOH
703
4
HOH
HOH
703
A
HOH
706
4
HOH
HOH
706
A
HOH
708
4
HOH
HOH
708
A
HOH
502
4
HOH
HOH
502
B
HOH
503
4
HOH
HOH
503
B
HOH
506
4
HOH
HOH
506
B
HOH
507
4
HOH
HOH
507
B
HOH
509
4
HOH
HOH
509
B
HOH
510
4
HOH
HOH
510
B
HOH
512
4
HOH
HOH
512
B
HOH
515
4
HOH
HOH
515
B
HOH
517
4
HOH
HOH
517
B
HOH
518
4
HOH
HOH
518
B
HOH
524
4
HOH
HOH
524
B
HOH
526
4
HOH
HOH
526
B
HOH
527
4
HOH
HOH
527
B
HOH
528
4
HOH
HOH
528
B
HOH
529
4
HOH
HOH
529
B
HOH
530
4
HOH
HOH
530
B
HOH
533
4
HOH
HOH
533
B
HOH
534
4
HOH
HOH
534
B
HOH
536
4
HOH
HOH
536
B
HOH
542
4
HOH
HOH
542
B
HOH
545
4
HOH
HOH
545
B
HOH
546
4
HOH
HOH
546
B
HOH
548
4
HOH
HOH
548
B
HOH
549
4
HOH
HOH
549
B
HOH
551
4
HOH
HOH
551
B
HOH
553
4
HOH
HOH
553
B
HOH
554
4
HOH
HOH
554
B
HOH
555
4
HOH
HOH
555
B
HOH
559
4
HOH
HOH
559
B
HOH
560
4
HOH
HOH
560
B
HOH
561
4
HOH
HOH
561
B
HOH
563
4
HOH
HOH
563
B
HOH
565
4
HOH
HOH
565
B
HOH
567
4
HOH
HOH
567
B
HOH
568
4
HOH
HOH
568
B
HOH
570
4
HOH
HOH
570
B
HOH
571
4
HOH
HOH
571
B
HOH
572
4
HOH
HOH
572
B
HOH
573
4
HOH
HOH
573
B
HOH
575
4
HOH
HOH
575
B
HOH
576
4
HOH
HOH
576
B
HOH
581
4
HOH
HOH
581
B
HOH
582
4
HOH
HOH
582
B
HOH
585
4
HOH
HOH
585
B
HOH
592
4
HOH
HOH
592
B
HOH
595
4
HOH
HOH
595
B
HOH
596
4
HOH
HOH
596
B
HOH
598
4
HOH
HOH
598
B
HOH
599
4
HOH
HOH
599
B
HOH
602
4
HOH
HOH
602
B
HOH
603
4
HOH
HOH
603
B
HOH
605
4
HOH
HOH
605
B
HOH
607
4
HOH
HOH
607
B
HOH
608
4
HOH
HOH
608
B
HOH
609
4
HOH
HOH
609
B
HOH
612
4
HOH
HOH
612
B
HOH
613
4
HOH
HOH
613
B
HOH
615
4
HOH
HOH
615
B
HOH
618
4
HOH
HOH
618
B
HOH
622
4
HOH
HOH
622
B
HOH
624
4
HOH
HOH
624
B
HOH
626
4
HOH
HOH
626
B
HOH
630
4
HOH
HOH
630
B
HOH
636
4
HOH
HOH
636
B
HOH
637
4
HOH
HOH
637
B
HOH
638
4
HOH
HOH
638
B
HOH
639
4
HOH
HOH
639
B
HOH
640
4
HOH
HOH
640
B
HOH
644
4
HOH
HOH
644
B
HOH
646
4
HOH
HOH
646
B
HOH
647
4
HOH
HOH
647
B
HOH
649
4
HOH
HOH
649
B
HOH
652
4
HOH
HOH
652
B
HOH
654
4
HOH
HOH
654
B
HOH
656
4
HOH
HOH
656
B
HOH
663
4
HOH
HOH
663
B
HOH
664
4
HOH
HOH
664
B
HOH
665
4
HOH
HOH
665
B
HOH
667
4
HOH
HOH
667
B
HOH
668
4
HOH
HOH
668
B
HOH
669
4
HOH
HOH
669
B
HOH
671
4
HOH
HOH
671
B
HOH
672
4
HOH
HOH
672
B
HOH
675
4
HOH
HOH
675
B
HOH
676
4
HOH
HOH
676
B
HOH
678
4
HOH
HOH
678
B
HOH
679
4
HOH
HOH
679
B
HOH
680
4
HOH
HOH
680
B
HOH
682
4
HOH
HOH
682
B
HOH
684
4
HOH
HOH
684
B
HOH
686
4
HOH
HOH
686
B
HOH
687
4
HOH
HOH
687
B
HOH
688
4
HOH
HOH
688
B
HOH
697
4
HOH
HOH
697
B
HOH
699
4
HOH
HOH
699
B
HOH
700
4
HOH
HOH
700
B
HOH
702
4
HOH
HOH
702
B
HOH
704
4
HOH
HOH
704
B
HOH
705
4
HOH
HOH
705
B
HOH
707
4
HOH
HOH
707
B
HOH
709
4
HOH
HOH
709
B
MET
46
n
1
MET
46
A
PRO
47
n
2
PRO
47
A
THR
48
n
3
THR
48
A
LEU
49
n
4
LEU
49
A
LEU
50
n
5
LEU
50
A
ARG
51
n
6
ARG
51
A
VAL
52
n
7
VAL
52
A
TYR
53
n
8
TYR
53
A
ILE
54
n
9
ILE
54
A
ASP
55
n
10
ASP
55
A
GLY
56
n
11
GLY
56
A
PRO
57
n
12
PRO
57
A
HIS
58
n
13
HIS
58
A
GLY
59
n
14
GLY
59
A
MET
60
n
15
MET
60
A
GLY
61
n
16
GLY
61
A
LYS
62
n
17
LYS
62
A
THR
63
n
18
THR
63
A
THR
64
n
19
THR
64
A
THR
65
n
20
THR
65
A
THR
66
n
21
THR
66
A
GLN
67
n
22
GLN
67
A
LEU
68
n
23
LEU
68
A
LEU
69
n
24
LEU
69
A
VAL
70
n
25
VAL
70
A
ALA
71
n
26
ALA
71
A
LEU
72
n
27
LEU
72
A
n
28
73
A
n
29
74
A
n
30
75
A
n
31
76
A
ASP
77
n
32
ASP
77
A
ILE
78
n
33
ILE
78
A
VAL
79
n
34
VAL
79
A
TYR
80
n
35
TYR
80
A
VAL
81
n
36
VAL
81
A
PRO
82
n
37
PRO
82
A
GLU
83
n
38
GLU
83
A
PRO
84
n
39
PRO
84
A
MET
85
n
40
MET
85
A
THR
86
n
41
THR
86
A
TYR
87
n
42
TYR
87
A
TRP
88
n
43
TRP
88
A
ARG
89
n
44
ARG
89
A
VAL
90
n
45
VAL
90
A
LEU
91
n
46
LEU
91
A
GLY
92
n
47
GLY
92
A
ALA
93
n
48
ALA
93
A
SER
94
n
49
SER
94
A
GLU
95
n
50
GLU
95
A
THR
96
n
51
THR
96
A
ILE
97
n
52
ILE
97
A
ALA
98
n
53
ALA
98
A
ASN
99
n
54
ASN
99
A
ILE
100
n
55
ILE
100
A
TYR
101
n
56
TYR
101
A
THR
102
n
57
THR
102
A
THR
103
n
58
THR
103
A
GLN
104
n
59
GLN
104
A
HIS
105
n
60
HIS
105
A
ARG
106
n
61
ARG
106
A
LEU
107
n
62
LEU
107
A
ASP
108
n
63
ASP
108
A
GLN
109
n
64
GLN
109
A
GLY
110
n
65
GLY
110
A
GLU
111
n
66
GLU
111
A
ILE
112
n
67
ILE
112
A
SER
113
n
68
SER
113
A
ALA
114
n
69
ALA
114
A
GLY
115
n
70
GLY
115
A
ASP
116
n
71
ASP
116
A
ALA
117
n
72
ALA
117
A
ALA
118
n
73
ALA
118
A
VAL
119
n
74
VAL
119
A
VAL
120
n
75
VAL
120
A
MET
121
n
76
MET
121
A
THR
122
n
77
THR
122
A
SER
123
n
78
SER
123
A
ALA
124
n
79
ALA
124
A
GLN
125
n
80
GLN
125
A
ILE
126
n
81
ILE
126
A
THR
127
n
82
THR
127
A
MET
128
n
83
MET
128
A
GLY
129
n
84
GLY
129
A
MET
130
n
85
MET
130
A
PRO
131
n
86
PRO
131
A
TYR
132
n
87
TYR
132
A
ALA
133
n
88
ALA
133
A
VAL
134
n
89
VAL
134
A
THR
135
n
90
THR
135
A
ASP
136
n
91
ASP
136
A
ALA
137
n
92
ALA
137
A
VAL
138
n
93
VAL
138
A
LEU
139
n
94
LEU
139
A
ALA
140
n
95
ALA
140
A
PRO
141
n
96
PRO
141
A
HIS
142
n
97
HIS
142
A
ILE
143
n
98
ILE
143
A
GLY
144
n
99
GLY
144
A
GLY
145
n
100
GLY
145
A
GLU
146
n
101
GLU
146
A
ALA
147
n
102
ALA
147
A
GLY
148
n
103
GLY
148
A
SER
149
n
104
SER
149
A
SER
150
n
105
SER
150
A
HIS
151
n
106
HIS
151
A
ALA
152
n
107
ALA
152
A
PRO
153
n
108
PRO
153
A
PRO
154
n
109
PRO
154
A
PRO
155
n
110
PRO
155
A
ALA
156
n
111
ALA
156
A
LEU
157
n
112
LEU
157
A
THR
158
n
113
THR
158
A
LEU
159
n
114
LEU
159
A
ILE
160
n
115
ILE
160
A
PHE
161
n
116
PHE
161
A
ASP
162
n
117
ASP
162
A
ARG
163
n
118
ARG
163
A
HIS
164
n
119
HIS
164
A
PRO
165
n
120
PRO
165
A
ILE
166
n
121
ILE
166
A
ALA
167
n
122
ALA
167
A
ALA
168
n
123
ALA
168
A
LEU
169
n
124
LEU
169
A
LEU
170
n
125
LEU
170
A
CYS
171
n
126
CYS
171
A
TYR
172
n
127
TYR
172
A
PRO
173
n
128
PRO
173
A
ALA
174
n
129
ALA
174
A
ALA
175
n
130
ALA
175
A
ARG
176
n
131
ARG
176
A
TYR
177
n
132
TYR
177
A
LEU
178
n
133
LEU
178
A
MET
179
n
134
MET
179
A
GLY
180
n
135
GLY
180
A
SER
181
n
136
SER
181
A
MET
182
n
137
MET
182
A
THR
183
n
138
THR
183
A
PRO
184
n
139
PRO
184
A
GLN
185
n
140
GLN
185
A
ALA
186
n
141
ALA
186
A
VAL
187
n
142
VAL
187
A
LEU
188
n
143
LEU
188
A
ALA
189
n
144
ALA
189
A
PHE
190
n
145
PHE
190
A
VAL
191
n
146
VAL
191
A
ALA
192
n
147
ALA
192
A
LEU
193
n
148
LEU
193
A
ILE
194
n
149
ILE
194
A
PRO
195
n
150
PRO
195
A
PRO
196
n
151
PRO
196
A
THR
197
n
152
THR
197
A
LEU
198
n
153
LEU
198
A
PRO
199
n
154
PRO
199
A
GLY
200
n
155
GLY
200
A
THR
201
n
156
THR
201
A
ASN
202
n
157
ASN
202
A
ILE
203
n
158
ILE
203
A
VAL
204
n
159
VAL
204
A
LEU
205
n
160
LEU
205
A
GLY
206
n
161
GLY
206
A
ALA
207
n
162
ALA
207
A
LEU
208
n
163
LEU
208
A
PRO
209
n
164
PRO
209
A
GLU
210
n
165
GLU
210
A
ASP
211
n
166
ASP
211
A
ARG
212
n
167
ARG
212
A
HIS
213
n
168
HIS
213
A
ILE
214
n
169
ILE
214
A
ASP
215
n
170
ASP
215
A
ARG
216
n
171
ARG
216
A
LEU
217
n
172
LEU
217
A
ALA
218
n
173
ALA
218
A
LYS
219
n
174
LYS
219
A
ARG
220
n
175
ARG
220
A
GLN
221
n
176
GLN
221
A
ARG
222
n
177
ARG
222
A
PRO
223
n
178
PRO
223
A
GLY
224
n
179
GLY
224
A
GLU
225
n
180
GLU
225
A
ARG
226
n
181
ARG
226
A
LEU
227
n
182
LEU
227
A
ASP
228
n
183
ASP
228
A
LEU
229
n
184
LEU
229
A
ALA
230
n
185
ALA
230
A
MET
231
n
186
MET
231
A
LEU
232
n
187
LEU
232
A
ALA
233
n
188
ALA
233
A
ALA
234
n
189
ALA
234
A
ILE
235
n
190
ILE
235
A
ARG
236
n
191
ARG
236
A
ARG
237
n
192
ARG
237
A
VAL
238
n
193
VAL
238
A
TYR
239
n
194
TYR
239
A
GLY
240
n
195
GLY
240
A
LEU
241
n
196
LEU
241
A
LEU
242
n
197
LEU
242
A
ALA
243
n
198
ALA
243
A
ASN
244
n
199
ASN
244
A
THR
245
n
200
THR
245
A
VAL
246
n
201
VAL
246
A
ARG
247
n
202
ARG
247
A
TYR
248
n
203
TYR
248
A
LEU
249
n
204
LEU
249
A
GLN
250
n
205
GLN
250
A
CYS
251
n
206
CYS
251
A
GLY
252
n
207
GLY
252
A
GLY
253
n
208
GLY
253
A
SER
254
n
209
SER
254
A
TRP
255
n
210
TRP
255
A
ARG
256
n
211
ARG
256
A
GLU
257
n
212
GLU
257
A
ASP
258
n
213
ASP
258
A
TRP
259
n
214
TRP
259
A
GLY
260
n
215
GLY
260
A
GLN
261
n
216
GLN
261
A
LEU
262
n
217
LEU
262
A
n
218
263
A
n
219
264
A
n
220
265
A
n
221
266
A
n
222
267
A
n
223
268
A
n
224
269
A
n
225
270
A
n
226
271
A
n
227
272
A
n
228
273
A
n
229
274
A
n
230
275
A
n
231
276
A
n
232
277
A
n
233
278
A
n
234
279
A
PRO
280
n
235
PRO
280
A
ARG
281
n
236
ARG
281
A
PRO
282
n
237
PRO
282
A
HIS
283
n
238
HIS
283
A
ILE
284
n
239
ILE
284
A
GLY
285
n
240
GLY
285
A
ASP
286
n
241
ASP
286
A
THR
287
n
242
THR
287
A
LEU
288
n
243
LEU
288
A
PHE
289
n
244
PHE
289
A
THR
290
n
245
THR
290
A
LEU
291
n
246
LEU
291
A
PHE
292
n
247
PHE
292
A
ARG
293
n
248
ARG
293
A
ALA
294
n
249
ALA
294
A
PRO
295
n
250
PRO
295
A
GLU
296
n
251
GLU
296
A
LEU
297
n
252
LEU
297
A
LEU
298
n
253
LEU
298
A
ALA
299
n
254
ALA
299
A
PRO
300
n
255
PRO
300
A
ASN
301
n
256
ASN
301
A
GLY
302
n
257
GLY
302
A
ASP
303
n
258
ASP
303
A
LEU
304
n
259
LEU
304
A
TYR
305
n
260
TYR
305
A
ASN
306
n
261
ASN
306
A
VAL
307
n
262
VAL
307
A
PHE
308
n
263
PHE
308
A
ALA
309
n
264
ALA
309
A
TRP
310
n
265
TRP
310
A
ALA
311
n
266
ALA
311
A
LEU
312
n
267
LEU
312
A
ASP
313
n
268
ASP
313
A
VAL
314
n
269
VAL
314
A
LEU
315
n
270
LEU
315
A
ALA
316
n
271
ALA
316
A
LYS
317
n
272
LYS
317
A
ARG
318
n
273
ARG
318
A
LEU
319
n
274
LEU
319
A
ARG
320
n
275
ARG
320
A
SER
321
n
276
SER
321
A
MET
322
n
277
MET
322
A
HIS
323
n
278
HIS
323
A
VAL
324
n
279
VAL
324
A
PHE
325
n
280
PHE
325
A
ILE
326
n
281
ILE
326
A
LEU
327
n
282
LEU
327
A
ASP
328
n
283
ASP
328
A
TYR
329
n
284
TYR
329
A
ASP
330
n
285
ASP
330
A
GLN
331
n
286
GLN
331
A
SER
332
n
287
SER
332
A
PRO
333
n
288
PRO
333
A
ALA
334
n
289
ALA
334
A
GLY
335
n
290
GLY
335
A
CYS
336
n
291
CYS
336
A
ARG
337
n
292
ARG
337
A
ASP
338
n
293
ASP
338
A
ALA
339
n
294
ALA
339
A
LEU
340
n
295
LEU
340
A
LEU
341
n
296
LEU
341
A
GLN
342
n
297
GLN
342
A
LEU
343
n
298
LEU
343
A
THR
344
n
299
THR
344
A
SER
345
n
300
SER
345
A
GLY
346
n
301
GLY
346
A
MET
347
n
302
MET
347
A
VAL
348
n
303
VAL
348
A
GLN
349
n
304
GLN
349
A
THR
350
n
305
THR
350
A
HIS
351
n
306
HIS
351
A
VAL
352
n
307
VAL
352
A
THR
353
n
308
THR
353
A
THR
354
n
309
THR
354
A
PRO
355
n
310
PRO
355
A
GLY
356
n
311
GLY
356
A
SER
357
n
312
SER
357
A
ILE
358
n
313
ILE
358
A
PRO
359
n
314
PRO
359
A
THR
360
n
315
THR
360
A
ILE
361
n
316
ILE
361
A
CYS
362
n
317
CYS
362
A
ASP
363
n
318
ASP
363
A
LEU
364
n
319
LEU
364
A
ALA
365
n
320
ALA
365
A
ARG
366
n
321
ARG
366
A
THR
367
n
322
THR
367
A
PHE
368
n
323
PHE
368
A
ALA
369
n
324
ALA
369
A
ARG
370
n
325
ARG
370
A
GLU
371
n
326
GLU
371
A
MET
372
n
327
MET
372
A
GLY
373
n
328
GLY
373
A
GLU
374
n
329
GLU
374
A
n
330
375
A
n
331
376
A
MET
46
n
1
MET
46
B
PRO
47
n
2
PRO
47
B
THR
48
n
3
THR
48
B
LEU
49
n
4
LEU
49
B
LEU
50
n
5
LEU
50
B
ARG
51
n
6
ARG
51
B
VAL
52
n
7
VAL
52
B
TYR
53
n
8
TYR
53
B
ILE
54
n
9
ILE
54
B
ASP
55
n
10
ASP
55
B
GLY
56
n
11
GLY
56
B
PRO
57
n
12
PRO
57
B
HIS
58
n
13
HIS
58
B
GLY
59
n
14
GLY
59
B
MET
60
n
15
MET
60
B
GLY
61
n
16
GLY
61
B
LYS
62
n
17
LYS
62
B
THR
63
n
18
THR
63
B
THR
64
n
19
THR
64
B
THR
65
n
20
THR
65
B
THR
66
n
21
THR
66
B
GLN
67
n
22
GLN
67
B
LEU
68
n
23
LEU
68
B
LEU
69
n
24
LEU
69
B
VAL
70
n
25
VAL
70
B
ALA
71
n
26
ALA
71
B
LEU
72
n
27
LEU
72
B
GLY
73
n
28
GLY
73
B
n
29
74
B
n
30
75
B
n
31
76
B
ASP
77
n
32
ASP
77
B
ILE
78
n
33
ILE
78
B
VAL
79
n
34
VAL
79
B
TYR
80
n
35
TYR
80
B
VAL
81
n
36
VAL
81
B
PRO
82
n
37
PRO
82
B
GLU
83
n
38
GLU
83
B
PRO
84
n
39
PRO
84
B
MET
85
n
40
MET
85
B
THR
86
n
41
THR
86
B
TYR
87
n
42
TYR
87
B
TRP
88
n
43
TRP
88
B
ARG
89
n
44
ARG
89
B
VAL
90
n
45
VAL
90
B
LEU
91
n
46
LEU
91
B
GLY
92
n
47
GLY
92
B
ALA
93
n
48
ALA
93
B
SER
94
n
49
SER
94
B
GLU
95
n
50
GLU
95
B
THR
96
n
51
THR
96
B
ILE
97
n
52
ILE
97
B
ALA
98
n
53
ALA
98
B
ASN
99
n
54
ASN
99
B
ILE
100
n
55
ILE
100
B
TYR
101
n
56
TYR
101
B
THR
102
n
57
THR
102
B
THR
103
n
58
THR
103
B
GLN
104
n
59
GLN
104
B
HIS
105
n
60
HIS
105
B
ARG
106
n
61
ARG
106
B
LEU
107
n
62
LEU
107
B
ASP
108
n
63
ASP
108
B
GLN
109
n
64
GLN
109
B
GLY
110
n
65
GLY
110
B
GLU
111
n
66
GLU
111
B
ILE
112
n
67
ILE
112
B
SER
113
n
68
SER
113
B
ALA
114
n
69
ALA
114
B
GLY
115
n
70
GLY
115
B
ASP
116
n
71
ASP
116
B
ALA
117
n
72
ALA
117
B
ALA
118
n
73
ALA
118
B
VAL
119
n
74
VAL
119
B
VAL
120
n
75
VAL
120
B
MET
121
n
76
MET
121
B
THR
122
n
77
THR
122
B
SER
123
n
78
SER
123
B
ALA
124
n
79
ALA
124
B
GLN
125
n
80
GLN
125
B
ILE
126
n
81
ILE
126
B
THR
127
n
82
THR
127
B
MET
128
n
83
MET
128
B
GLY
129
n
84
GLY
129
B
MET
130
n
85
MET
130
B
PRO
131
n
86
PRO
131
B
TYR
132
n
87
TYR
132
B
ALA
133
n
88
ALA
133
B
VAL
134
n
89
VAL
134
B
THR
135
n
90
THR
135
B
ASP
136
n
91
ASP
136
B
ALA
137
n
92
ALA
137
B
VAL
138
n
93
VAL
138
B
LEU
139
n
94
LEU
139
B
ALA
140
n
95
ALA
140
B
PRO
141
n
96
PRO
141
B
HIS
142
n
97
HIS
142
B
ILE
143
n
98
ILE
143
B
GLY
144
n
99
GLY
144
B
GLY
145
n
100
GLY
145
B
GLU
146
n
101
GLU
146
B
ALA
147
n
102
ALA
147
B
GLY
148
n
103
GLY
148
B
SER
149
n
104
SER
149
B
SER
150
n
105
SER
150
B
HIS
151
n
106
HIS
151
B
ALA
152
n
107
ALA
152
B
PRO
153
n
108
PRO
153
B
PRO
154
n
109
PRO
154
B
PRO
155
n
110
PRO
155
B
ALA
156
n
111
ALA
156
B
LEU
157
n
112
LEU
157
B
THR
158
n
113
THR
158
B
LEU
159
n
114
LEU
159
B
ILE
160
n
115
ILE
160
B
PHE
161
n
116
PHE
161
B
ASP
162
n
117
ASP
162
B
ARG
163
n
118
ARG
163
B
HIS
164
n
119
HIS
164
B
PRO
165
n
120
PRO
165
B
ILE
166
n
121
ILE
166
B
ALA
167
n
122
ALA
167
B
ALA
168
n
123
ALA
168
B
LEU
169
n
124
LEU
169
B
LEU
170
n
125
LEU
170
B
CYS
171
n
126
CYS
171
B
TYR
172
n
127
TYR
172
B
PRO
173
n
128
PRO
173
B
ALA
174
n
129
ALA
174
B
ALA
175
n
130
ALA
175
B
ARG
176
n
131
ARG
176
B
TYR
177
n
132
TYR
177
B
LEU
178
n
133
LEU
178
B
MET
179
n
134
MET
179
B
GLY
180
n
135
GLY
180
B
SER
181
n
136
SER
181
B
MET
182
n
137
MET
182
B
THR
183
n
138
THR
183
B
PRO
184
n
139
PRO
184
B
GLN
185
n
140
GLN
185
B
ALA
186
n
141
ALA
186
B
VAL
187
n
142
VAL
187
B
LEU
188
n
143
LEU
188
B
ALA
189
n
144
ALA
189
B
PHE
190
n
145
PHE
190
B
VAL
191
n
146
VAL
191
B
ALA
192
n
147
ALA
192
B
LEU
193
n
148
LEU
193
B
ILE
194
n
149
ILE
194
B
PRO
195
n
150
PRO
195
B
PRO
196
n
151
PRO
196
B
THR
197
n
152
THR
197
B
LEU
198
n
153
LEU
198
B
PRO
199
n
154
PRO
199
B
GLY
200
n
155
GLY
200
B
THR
201
n
156
THR
201
B
ASN
202
n
157
ASN
202
B
ILE
203
n
158
ILE
203
B
VAL
204
n
159
VAL
204
B
LEU
205
n
160
LEU
205
B
GLY
206
n
161
GLY
206
B
ALA
207
n
162
ALA
207
B
LEU
208
n
163
LEU
208
B
PRO
209
n
164
PRO
209
B
GLU
210
n
165
GLU
210
B
ASP
211
n
166
ASP
211
B
ARG
212
n
167
ARG
212
B
HIS
213
n
168
HIS
213
B
ILE
214
n
169
ILE
214
B
ASP
215
n
170
ASP
215
B
ARG
216
n
171
ARG
216
B
LEU
217
n
172
LEU
217
B
ALA
218
n
173
ALA
218
B
LYS
219
n
174
LYS
219
B
ARG
220
n
175
ARG
220
B
GLN
221
n
176
GLN
221
B
ARG
222
n
177
ARG
222
B
PRO
223
n
178
PRO
223
B
GLY
224
n
179
GLY
224
B
GLU
225
n
180
GLU
225
B
ARG
226
n
181
ARG
226
B
LEU
227
n
182
LEU
227
B
ASP
228
n
183
ASP
228
B
LEU
229
n
184
LEU
229
B
ALA
230
n
185
ALA
230
B
MET
231
n
186
MET
231
B
LEU
232
n
187
LEU
232
B
ALA
233
n
188
ALA
233
B
ALA
234
n
189
ALA
234
B
ILE
235
n
190
ILE
235
B
ARG
236
n
191
ARG
236
B
ARG
237
n
192
ARG
237
B
VAL
238
n
193
VAL
238
B
TYR
239
n
194
TYR
239
B
GLY
240
n
195
GLY
240
B
LEU
241
n
196
LEU
241
B
LEU
242
n
197
LEU
242
B
ALA
243
n
198
ALA
243
B
ASN
244
n
199
ASN
244
B
THR
245
n
200
THR
245
B
VAL
246
n
201
VAL
246
B
ARG
247
n
202
ARG
247
B
TYR
248
n
203
TYR
248
B
LEU
249
n
204
LEU
249
B
GLN
250
n
205
GLN
250
B
CYS
251
n
206
CYS
251
B
GLY
252
n
207
GLY
252
B
GLY
253
n
208
GLY
253
B
SER
254
n
209
SER
254
B
TRP
255
n
210
TRP
255
B
ARG
256
n
211
ARG
256
B
GLU
257
n
212
GLU
257
B
ASP
258
n
213
ASP
258
B
TRP
259
n
214
TRP
259
B
GLY
260
n
215
GLY
260
B
GLN
261
n
216
GLN
261
B
LEU
262
n
217
LEU
262
B
SER
263
n
218
SER
263
B
n
219
264
B
n
220
265
B
n
221
266
B
n
222
267
B
n
223
268
B
n
224
269
B
n
225
270
B
n
226
271
B
n
227
272
B
n
228
273
B
n
229
274
B
n
230
275
B
n
231
276
B
ASN
277
n
232
ASN
277
B
ALA
278
n
233
ALA
278
B
GLY
279
n
234
GLY
279
B
PRO
280
n
235
PRO
280
B
ARG
281
n
236
ARG
281
B
PRO
282
n
237
PRO
282
B
HIS
283
n
238
HIS
283
B
ILE
284
n
239
ILE
284
B
GLY
285
n
240
GLY
285
B
ASP
286
n
241
ASP
286
B
THR
287
n
242
THR
287
B
LEU
288
n
243
LEU
288
B
PHE
289
n
244
PHE
289
B
THR
290
n
245
THR
290
B
LEU
291
n
246
LEU
291
B
PHE
292
n
247
PHE
292
B
ARG
293
n
248
ARG
293
B
ALA
294
n
249
ALA
294
B
PRO
295
n
250
PRO
295
B
GLU
296
n
251
GLU
296
B
LEU
297
n
252
LEU
297
B
LEU
298
n
253
LEU
298
B
ALA
299
n
254
ALA
299
B
PRO
300
n
255
PRO
300
B
ASN
301
n
256
ASN
301
B
GLY
302
n
257
GLY
302
B
ASP
303
n
258
ASP
303
B
LEU
304
n
259
LEU
304
B
TYR
305
n
260
TYR
305
B
ASN
306
n
261
ASN
306
B
VAL
307
n
262
VAL
307
B
PHE
308
n
263
PHE
308
B
ALA
309
n
264
ALA
309
B
TRP
310
n
265
TRP
310
B
ALA
311
n
266
ALA
311
B
LEU
312
n
267
LEU
312
B
ASP
313
n
268
ASP
313
B
VAL
314
n
269
VAL
314
B
LEU
315
n
270
LEU
315
B
ALA
316
n
271
ALA
316
B
LYS
317
n
272
LYS
317
B
ARG
318
n
273
ARG
318
B
LEU
319
n
274
LEU
319
B
ARG
320
n
275
ARG
320
B
SER
321
n
276
SER
321
B
MET
322
n
277
MET
322
B
HIS
323
n
278
HIS
323
B
VAL
324
n
279
VAL
324
B
PHE
325
n
280
PHE
325
B
ILE
326
n
281
ILE
326
B
LEU
327
n
282
LEU
327
B
ASP
328
n
283
ASP
328
B
TYR
329
n
284
TYR
329
B
ASP
330
n
285
ASP
330
B
GLN
331
n
286
GLN
331
B
SER
332
n
287
SER
332
B
PRO
333
n
288
PRO
333
B
ALA
334
n
289
ALA
334
B
GLY
335
n
290
GLY
335
B
CYS
336
n
291
CYS
336
B
ARG
337
n
292
ARG
337
B
ASP
338
n
293
ASP
338
B
ALA
339
n
294
ALA
339
B
LEU
340
n
295
LEU
340
B
LEU
341
n
296
LEU
341
B
GLN
342
n
297
GLN
342
B
LEU
343
n
298
LEU
343
B
THR
344
n
299
THR
344
B
SER
345
n
300
SER
345
B
GLY
346
n
301
GLY
346
B
MET
347
n
302
MET
347
B
VAL
348
n
303
VAL
348
B
GLN
349
n
304
GLN
349
B
THR
350
n
305
THR
350
B
HIS
351
n
306
HIS
351
B
VAL
352
n
307
VAL
352
B
THR
353
n
308
THR
353
B
THR
354
n
309
THR
354
B
PRO
355
n
310
PRO
355
B
GLY
356
n
311
GLY
356
B
SER
357
n
312
SER
357
B
ILE
358
n
313
ILE
358
B
PRO
359
n
314
PRO
359
B
THR
360
n
315
THR
360
B
ILE
361
n
316
ILE
361
B
CYS
362
n
317
CYS
362
B
ASP
363
n
318
ASP
363
B
LEU
364
n
319
LEU
364
B
ALA
365
n
320
ALA
365
B
ARG
366
n
321
ARG
366
B
THR
367
n
322
THR
367
B
PHE
368
n
323
PHE
368
B
ALA
369
n
324
ALA
369
B
ARG
370
n
325
ARG
370
B
GLU
371
n
326
GLU
371
B
MET
372
n
327
MET
372
B
GLY
373
n
328
GLY
373
B
GLU
374
n
329
GLU
374
B
ALA
375
n
330
ALA
375
B
n
331
376
B
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
4990
-63
23040
12510
-138
43560
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_566
x,-y+1,-z+1
crystal symmetry operation
0.0000000000
118.7000000000
109.1000000000
A
O
HIS
323
A
O
HIS
278
A
N
ILE
203
A
N
ILE
158
A
O
ASN
202
A
O
ASN
157
A
N
TYR
53
A
N
TYR
8
A
O
LEU
50
A
O
LEU
5
A
N
LEU
157
A
N
LEU
112
A
O
THR
158
A
O
THR
113
A
N
VAL
79
A
N
VAL
34
B
O
HIS
323
B
O
HIS
278
B
N
THR
201
B
N
THR
156
B
O
ASN
202
B
O
ASN
157
B
N
TYR
53
B
N
TYR
8
B
O
LEU
50
B
O
LEU
5
B
N
LEU
157
B
N
LEU
112
B
O
THR
158
B
O
THR
113
B
N
VAL
79
B
N
VAL
34
1
A
CG
MET
46
A
CG
MET
1
1
Y
1
A
SD
MET
46
A
SD
MET
1
1
Y
1
A
CE
MET
46
A
CE
MET
1
1
Y
1
A
CA
LEU
72
A
CA
LEU
27
1
Y
1
A
C
LEU
72
A
C
LEU
27
1
Y
1
A
O
LEU
72
A
O
LEU
27
1
Y
1
A
CB
LEU
72
A
CB
LEU
27
1
Y
1
A
CG
LEU
72
A
CG
LEU
27
1
Y
1
A
CD1
LEU
72
A
CD1
LEU
27
1
Y
1
A
CD2
LEU
72
A
CD2
LEU
27
1
Y
1
A
CA
LEU
262
A
CA
LEU
217
1
Y
1
A
C
LEU
262
A
C
LEU
217
1
Y
1
A
O
LEU
262
A
O
LEU
217
1
Y
1
A
CB
LEU
262
A
CB
LEU
217
1
Y
1
A
CG
LEU
262
A
CG
LEU
217
1
Y
1
A
CD1
LEU
262
A
CD1
LEU
217
1
Y
1
A
CD2
LEU
262
A
CD2
LEU
217
1
Y
1
A
CG
PRO
280
A
CG
PRO
235
1
Y
1
A
CD
PRO
280
A
CD
PRO
235
1
Y
1
B
CG
MET
46
B
CG
MET
1
1
Y
1
B
SD
MET
46
B
SD
MET
1
1
Y
1
B
CE
MET
46
B
CE
MET
1
1
Y
1
B
CA
GLY
73
B
CA
GLY
28
1
Y
1
B
C
GLY
73
B
C
GLY
28
1
Y
1
B
O
GLY
73
B
O
GLY
28
1
Y
1
B
CA
SER
263
B
CA
SER
218
1
Y
1
B
C
SER
263
B
C
SER
218
1
Y
1
B
O
SER
263
B
O
SER
218
1
Y
1
B
CB
SER
263
B
CB
SER
218
1
Y
1
B
OG
SER
263
B
OG
SER
218
1
Y
1
A
GLY
73
A
GLY
28
1
Y
1
A
SER
74
A
SER
29
1
Y
1
A
ARG
75
A
ARG
30
1
Y
1
A
ASP
76
A
ASP
31
1
Y
1
A
SER
263
A
SER
218
1
Y
1
A
GLY
264
A
GLY
219
1
Y
1
A
THR
265
A
THR
220
1
Y
1
A
ALA
266
A
ALA
221
1
Y
1
A
VAL
267
A
VAL
222
1
Y
1
A
PRO
268
A
PRO
223
1
Y
1
A
PRO
269
A
PRO
224
1
Y
1
A
GLN
270
A
GLN
225
1
Y
1
A
GLY
271
A
GLY
226
1
Y
1
A
ALA
272
A
ALA
227
1
Y
1
A
GLU
273
A
GLU
228
1
Y
1
A
PRO
274
A
PRO
229
1
Y
1
A
GLN
275
A
GLN
230
1
Y
1
A
SER
276
A
SER
231
1
Y
1
A
ASN
277
A
ASN
232
1
Y
1
A
ALA
278
A
ALA
233
1
Y
1
A
GLY
279
A
GLY
234
1
Y
1
A
ALA
375
A
ALA
330
1
Y
1
A
ASN
376
A
ASN
331
1
Y
1
B
SER
74
B
SER
29
1
Y
1
B
ARG
75
B
ARG
30
1
Y
1
B
ASP
76
B
ASP
31
1
Y
1
B
GLY
264
B
GLY
219
1
Y
1
B
THR
265
B
THR
220
1
Y
1
B
ALA
266
B
ALA
221
1
Y
1
B
VAL
267
B
VAL
222
1
Y
1
B
PRO
268
B
PRO
223
1
Y
1
B
PRO
269
B
PRO
224
1
Y
1
B
GLN
270
B
GLN
225
1
Y
1
B
GLY
271
B
GLY
226
1
Y
1
B
ALA
272
B
ALA
227
1
Y
1
B
GLU
273
B
GLU
228
1
Y
1
B
PRO
274
B
PRO
229
1
Y
1
B
GLN
275
B
GLN
230
1
Y
1
B
SER
276
B
SER
231
1
Y
1
B
ASN
376
B
ASN
331
1
Y
1
A
VAL
70
-88.51
-97.96
1
A
PRO
84
-71.24
48.17
1
A
VAL
90
-142.30
-40.64
1
A
ALA
93
-159.95
-125.51
1
A
ALA
147
-108.67
77.14
1
A
SER
149
-36.72
149.20
1
A
SER
150
60.81
134.36
1
A
ALA
152
-106.18
-151.58
1
A
ARG
163
80.97
151.31
1
A
LEU
178
-58.72
-2.79
1
A
LEU
227
-69.73
77.36
1
A
GLN
250
-59.70
-7.41
1
A
GLN
261
-123.11
-66.57
1
A
ASP
330
-60.27
72.59
1
A
GLN
331
176.63
173.39
1
B
PRO
82
-60.47
-166.21
1
B
PRO
84
-64.24
57.52
1
B
VAL
90
-140.23
-59.02
1
B
ALA
140
-22.20
-60.29
1
B
ALA
147
-140.92
-48.76
1
B
SER
150
-44.93
91.69
1
B
HIS
151
64.58
61.57
1
B
ARG
163
82.97
173.36
1
B
LEU
170
-156.30
-58.12
1
B
LEU
208
-176.27
135.75
1
B
LYS
219
-94.84
-94.62
1
B
ARG
220
-55.07
102.50
1
B
LEU
227
-55.26
90.19
1
B
ALA
278
-59.98
44.68
1
B
PHE
292
-102.59
50.67
1
B
HIS
351
-79.86
-169.56
1
B
GLU
374
60.80
-51.52
1KIN_PARHCSDX.PRO
1KIN_SO4.TOP
1KIN_PARAM19.SOL
1KIN_TOPH19.SOL
1KIN_PARNAH1E.DNA
1KIN_TOPHCSDX.PRO
1KIN_SO4.PAR
1KIN_GAN.TOP
1KIN_GAN.PAR
NCS RESTRAINTS NOT USED IN FINAL CYCLES.
IN C-TERMINAL PORTIONS OF MODELLED SEGMENTS, PEPTIDE
HAS BECOME SIGNIFICANTLY NON-PLANAR.
0.2910000
0.1920000
0.1920000
2.20
12
2780
28108
10
74.0
RANDOM
1
INDIVIDUAL B-FACTOR REFT.
THROUGHOUT
2.2
MIR + NCS IMPROVEMENT AND SOLVENT FLATTENING FOR ORIGINAL NATIVE, 1KIN
0.30
2.20
12
209
4977
46
0
4722
0.012
1.863
22.96
1.507
1.5
3.0
2.0
4.0
1.5
3.0
2.0
4.0
0.3750000
0.2930000
2.28
172
1535
10
11
74.5
28.6
2.2
1KI2
28516
0
0.6100000
1
2.5
74.6
phasing
SOLOMON
refinement
X-PLOR
3.1
data reduction
R-AXIS
(HIGASHI/RIGAKU)
data scaling
PROCESS
(HIGASHI)
CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH GANCICLOVIR
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
LYS
62
A
LYS
17
HELX_P
A
LEU
69
A
LEU
24
1
1
8
A
MET
85
A
MET
40
HELX_P
A
ARG
89
A
ARG
44
1
2
5
A
THR
96
A
THR
51
HELX_P
A
ASP
108
A
ASP
63
1
3
13
A
ASP
116
A
ASP
71
HELX_P
A
LEU
139
A
LEU
94
1
4
24
A
PRO
165
A
PRO
120
HELX_P
A
LEU
169
A
LEU
124
1
5
5
A
CYS
171
A
CYS
126
HELX_P
A
MET
179
A
MET
134
1
6
9
A
PRO
184
A
PRO
139
HELX_P
A
ALA
192
A
ALA
147
1
7
9
A
GLU
210
A
GLU
165
HELX_P
A
LYS
219
A
LYS
174
1
8
10
A
LEU
229
A
LEU
184
HELX_P
A
CYS
251
A
CYS
206
1
9
23
A
TRP
255
A
TRP
210
HELX_P
A
ASP
258
A
ASP
213
1
10
4
A
ILE
284
A
ILE
239
HELX_P
A
ASP
286
A
ASP
241
5
11
3
A
LEU
288
A
LEU
243
HELX_P
A
PHE
292
A
PHE
247
5
12
5
A
PRO
295
A
PRO
250
HELX_P
A
LEU
297
A
LEU
252
5
13
3
A
ASN
306
A
ASN
261
HELX_P
A
ARG
320
A
ARG
275
1
14
15
A
PRO
333
A
PRO
288
HELX_P
A
GLY
346
A
GLY
301
1
15
14
A
PRO
355
A
PRO
310
HELX_P
A
GLU
371
A
GLU
326
5
16
17
B
LYS
62
B
LYS
17
HELX_P
B
ALA
71
B
ALA
26
1
17
10
B
MET
85
B
MET
40
HELX_P
B
ARG
89
B
ARG
44
1
18
5
B
THR
96
B
THR
51
HELX_P
B
GLN
109
B
GLN
64
1
19
14
B
ALA
114
B
ALA
69
HELX_P
B
HIS
142
B
HIS
97
1
20
29
B
PRO
165
B
PRO
120
HELX_P
B
LEU
169
B
LEU
124
1
21
5
B
CYS
171
B
CYS
126
HELX_P
B
MET
179
B
MET
134
1
22
9
B
PRO
184
B
PRO
139
HELX_P
B
LEU
193
B
LEU
148
1
23
10
B
GLU
210
B
GLU
165
HELX_P
B
LYS
219
B
LYS
174
1
24
10
B
LEU
229
B
LEU
184
HELX_P
B
GLN
250
B
GLN
205
1
25
22
B
TRP
255
B
TRP
210
HELX_P
B
GLN
261
B
GLN
216
1
26
7
B
ILE
284
B
ILE
239
HELX_P
B
ASP
286
B
ASP
241
5
27
3
B
LEU
288
B
LEU
243
HELX_P
B
LEU
291
B
LEU
246
5
28
4
B
PRO
295
B
PRO
250
HELX_P
B
LEU
297
B
LEU
252
5
29
3
B
ASN
306
B
ASN
261
HELX_P
B
LEU
319
B
LEU
274
1
30
14
B
PRO
333
B
PRO
288
HELX_P
B
GLY
346
B
GLY
301
1
31
14
B
PRO
355
B
PRO
310
HELX_P
B
MET
372
B
MET
327
5
32
18
PHOSPHOTRANSFERASE
PHOSPHOTRANSFERASE, THYMIDINE KINASE, VIRIDAE, DS-DNA ENVELOPED VIRUSES, HERPESVIRIDAE, ALPHAHERPESVIRINAE, ANTIVIRAL DRUG, GANCICLOVIR
given
-0.928090
0.323030
0.185200
0.317370
0.426160
0.847150
0.194730
0.845010
-0.498040
27.17328
-0.93124
-8.67953
KITH_HSV11
UNP
1
1
P03176
MASYPCHQHASAFDQAARSRGHNNRRTALRPRRQQEATEVRPEQKMPTLLRVYIDGPHGMGKTTTTQLLVALGSRDDIVY
VPEPMTYWRVLGASETIANIYTTQHRLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLI
FDRHPIAALLCYPAARYLMGSMTPQAVLAFVALIPPTLPGTNIVLGALPEDRHIDRLAKRQRPGERLDLAMLAAIRRVYG
LLANTVRYLQCGGSWREDWGQLSGTAVPPQGAEPQSNAGPRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALDVLAKRLR
SMHVFILDYDQSPAGCRDALLQLTSGMVQTHVTTPGSIPTICDLARTFAREMGEAN
46
376
1KI2
46
376
P03176
A
1
1
331
46
376
1KI2
46
376
P03176
B
1
1
331
5
5
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
HIS
323
A
HIS
278
A
ASP
328
A
ASP
283
A
ASN
202
A
ASN
157
A
ALA
207
A
ALA
162
A
LEU
49
A
LEU
4
A
ILE
54
A
ILE
9
A
LEU
157
A
LEU
112
A
ASP
162
A
ASP
117
A
ILE
78
A
ILE
33
A
VAL
81
A
VAL
36
B
MET
322
B
MET
277
B
ASP
328
B
ASP
283
B
THR
201
B
THR
156
B
ALA
207
B
ALA
162
B
LEU
49
B
LEU
4
B
ILE
54
B
ILE
9
B
LEU
157
B
LEU
112
B
ASP
162
B
ASP
117
B
ILE
78
B
ILE
33
B
VAL
81
B
VAL
36
BINDING SITE FOR RESIDUE SO4 A 3
A
SO4
3
Software
8
BINDING SITE FOR RESIDUE SO4 B 4
B
SO4
4
Software
7
BINDING SITE FOR RESIDUE GA2 A 1
A
GA2
1
Software
12
BINDING SITE FOR RESIDUE GA2 B 2
B
GA2
2
Software
13
A
HIS
58
A
HIS
13
8
1_555
A
GLY
59
A
GLY
14
8
1_555
A
MET
60
A
MET
15
8
1_555
A
GLY
61
A
GLY
16
8
1_555
A
LYS
62
A
LYS
17
8
1_555
A
THR
63
A
THR
18
8
1_555
A
ARG
220
A
ARG
175
8
1_555
A
ARG
222
A
ARG
177
8
1_555
B
GLY
59
B
GLY
14
7
1_555
B
MET
60
B
MET
15
7
1_555
B
GLY
61
B
GLY
16
7
1_555
B
LYS
62
B
LYS
17
7
1_555
B
THR
63
B
THR
18
7
1_555
B
ARG
222
B
ARG
177
7
1_555
B
HOH
517
H
HOH
7
1_555
A
HIS
58
A
HIS
13
12
1_555
A
GLU
83
A
GLU
38
12
1_555
A
ILE
100
A
ILE
55
12
1_555
A
TYR
101
A
TYR
56
12
1_555
A
GLN
125
A
GLN
80
12
1_555
A
MET
128
A
MET
83
12
1_555
A
ARG
163
A
ARG
118
12
1_555
A
TYR
172
A
TYR
127
12
1_555
A
ARG
176
A
ARG
131
12
1_555
A
ARG
222
A
ARG
177
12
1_555
A
GLU
225
A
GLU
180
12
1_555
A
HOH
695
G
HOH
12
1_555
B
HIS
58
B
HIS
13
13
1_555
B
GLU
83
B
GLU
38
13
1_555
B
TRP
88
B
TRP
43
13
1_555
B
ILE
100
B
ILE
55
13
1_555
B
TYR
101
B
TYR
56
13
1_555
B
GLN
125
B
GLN
80
13
1_555
B
MET
128
B
MET
83
13
1_555
B
ARG
163
B
ARG
118
13
1_555
B
TYR
172
B
TYR
127
13
1_555
B
ARG
176
B
ARG
131
13
1_555
B
ARG
222
B
ARG
177
13
1_555
B
GLU
225
B
GLU
180
13
1_555
B
HOH
686
H
HOH
13
1_555
20
C 2 2 21