.022427
.012948
.000000
.000000
.025896
.000000
.000000
.000000
.010204
.00000
.00000
.00000
Ratnaparkhi, G.S.
Varadarajan, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
44.590
44.590
98.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
276
28789
28798
10.1074/jbc.M101906200
11373282
Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
2001
1.000000
.000000
.000000
.000000
1.000000
.000000
.000000
.000000
1.000000
.00000
.00000
.00000
293.0
1
IMAGE PLATE
1998-08-26
MARRESEARCH
Mirrors
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
1750.952
RIBONUCLEASE PANCREATIC
3.1.27.5
S PEPTIDE
1
syn
polymer
11555.981
RIBONUCLEASE PANCREATIC
3.1.27.5
S PROTEIN
1
nat
polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
43
nat
water
RNASE S
RNASE S
no
yes
KETAAAKFERQHMDS(NH2)
KETAAAKFERQHMDSX
A
polypeptide(L)
no
no
SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTT
QANKHIIVACEGNPYVPVHFDASV
SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTT
QANKHIIVACEGNPYVPVHFDASV
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
sample
9913
pancreas
Bos taurus
1
2.11
41.78
VAPOR DIFFUSION, SITTING DROP
4.75
Ammonium Sulfate, cesium Chloride, pH 4.75, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K
293.0
software
repository
Initial release
Version format compliance
Version format compliance
Refinement description
1
0
2001-06-06
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
RCSB
Y
RCSB
2001-05-19
REL
REL
SO4
SULFATE ION
HOH
water
This peptide was chemically synthesized. It is naturally found in Bos Taurus
sample
SO4
125
3
SO4
SO4
125
B
WAT
202
4
HOH
HOH
202
A
WAT
218
4
HOH
HOH
218
A
WAT
223
4
HOH
HOH
223
A
WAT
227
4
HOH
HOH
227
A
WAT
234
4
HOH
HOH
234
A
WAT
245
4
HOH
HOH
245
A
WAT
247
4
HOH
HOH
247
A
WAT
201
4
HOH
HOH
201
B
WAT
203
4
HOH
HOH
203
B
WAT
205
4
HOH
HOH
205
B
WAT
206
4
HOH
HOH
206
B
WAT
207
4
HOH
HOH
207
B
WAT
208
4
HOH
HOH
208
B
WAT
209
4
HOH
HOH
209
B
WAT
210
4
HOH
HOH
210
B
WAT
211
4
HOH
HOH
211
B
WAT
212
4
HOH
HOH
212
B
WAT
213
4
HOH
HOH
213
B
WAT
214
4
HOH
HOH
214
B
WAT
215
4
HOH
HOH
215
B
WAT
216
4
HOH
HOH
216
B
WAT
217
4
HOH
HOH
217
B
WAT
220
4
HOH
HOH
220
B
WAT
221
4
HOH
HOH
221
B
WAT
222
4
HOH
HOH
222
B
WAT
224
4
HOH
HOH
224
B
WAT
226
4
HOH
HOH
226
B
WAT
228
4
HOH
HOH
228
B
WAT
231
4
HOH
HOH
231
B
WAT
232
4
HOH
HOH
232
B
WAT
236
4
HOH
HOH
236
B
WAT
237
4
HOH
HOH
237
B
WAT
238
4
HOH
HOH
238
B
WAT
239
4
HOH
HOH
239
B
WAT
240
4
HOH
HOH
240
B
WAT
241
4
HOH
HOH
241
B
WAT
243
4
HOH
HOH
243
B
WAT
246
4
HOH
HOH
246
B
WAT
248
4
HOH
HOH
248
B
WAT
249
4
HOH
HOH
249
B
WAT
250
4
HOH
HOH
250
B
WAT
252
4
HOH
HOH
252
B
WAT
256
4
HOH
HOH
256
B
LYS
1
n
1
LYS
1
A
GLU
2
n
2
GLU
2
A
THR
3
n
3
THR
3
A
ALA
4
n
4
ALA
4
A
ALA
5
n
5
ALA
5
A
ALA
6
n
6
ALA
6
A
LYS
7
n
7
LYS
7
A
PHE
8
n
8
PHE
8
A
GLU
9
n
9
GLU
9
A
ARG
10
n
10
ARG
10
A
GLN
11
n
11
GLN
11
A
HIS
12
n
12
HIS
12
A
MET
13
n
13
MET
13
A
ASP
14
n
14
ASP
14
A
SER
15
n
15
SER
15
A
SER
15
n
16
NH2
16
A
n
1
21
B
n
2
22
B
n
3
23
B
ASN
24
n
4
ASN
24
B
TYR
25
n
5
TYR
25
B
CYS
26
n
6
CYS
26
B
ASN
27
n
7
ASN
27
B
GLN
28
n
8
GLN
28
B
MET
29
n
9
MET
29
B
MET
30
n
10
MET
30
B
LYS
31
n
11
LYS
31
B
SER
32
n
12
SER
32
B
ARG
33
n
13
ARG
33
B
ASN
34
n
14
ASN
34
B
LEU
35
n
15
LEU
35
B
THR
36
n
16
THR
36
B
LYS
37
n
17
LYS
37
B
ASP
38
n
18
ASP
38
B
ARG
39
n
19
ARG
39
B
CYS
40
n
20
CYS
40
B
LYS
41
n
21
LYS
41
B
PRO
42
n
22
PRO
42
B
VAL
43
n
23
VAL
43
B
ASN
44
n
24
ASN
44
B
THR
45
n
25
THR
45
B
PHE
46
n
26
PHE
46
B
VAL
47
n
27
VAL
47
B
HIS
48
n
28
HIS
48
B
GLU
49
n
29
GLU
49
B
SER
50
n
30
SER
50
B
LEU
51
n
31
LEU
51
B
ALA
52
n
32
ALA
52
B
ASP
53
n
33
ASP
53
B
VAL
54
n
34
VAL
54
B
GLN
55
n
35
GLN
55
B
ALA
56
n
36
ALA
56
B
VAL
57
n
37
VAL
57
B
CYS
58
n
38
CYS
58
B
SER
59
n
39
SER
59
B
GLN
60
n
40
GLN
60
B
LYS
61
n
41
LYS
61
B
ASN
62
n
42
ASN
62
B
VAL
63
n
43
VAL
63
B
ALA
64
n
44
ALA
64
B
CYS
65
n
45
CYS
65
B
LYS
66
n
46
LYS
66
B
ASN
67
n
47
ASN
67
B
GLY
68
n
48
GLY
68
B
GLN
69
n
49
GLN
69
B
THR
70
n
50
THR
70
B
ASN
71
n
51
ASN
71
B
CYS
72
n
52
CYS
72
B
TYR
73
n
53
TYR
73
B
GLN
74
n
54
GLN
74
B
SER
75
n
55
SER
75
B
TYR
76
n
56
TYR
76
B
SER
77
n
57
SER
77
B
THR
78
n
58
THR
78
B
MET
79
n
59
MET
79
B
SER
80
n
60
SER
80
B
ILE
81
n
61
ILE
81
B
THR
82
n
62
THR
82
B
ASP
83
n
63
ASP
83
B
CYS
84
n
64
CYS
84
B
ARG
85
n
65
ARG
85
B
GLU
86
n
66
GLU
86
B
THR
87
n
67
THR
87
B
GLY
88
n
68
GLY
88
B
SER
89
n
69
SER
89
B
SER
90
n
70
SER
90
B
LYS
91
n
71
LYS
91
B
TYR
92
n
72
TYR
92
B
PRO
93
n
73
PRO
93
B
ASN
94
n
74
ASN
94
B
CYS
95
n
75
CYS
95
B
ALA
96
n
76
ALA
96
B
TYR
97
n
77
TYR
97
B
LYS
98
n
78
LYS
98
B
THR
99
n
79
THR
99
B
THR
100
n
80
THR
100
B
GLN
101
n
81
GLN
101
B
ALA
102
n
82
ALA
102
B
ASN
103
n
83
ASN
103
B
LYS
104
n
84
LYS
104
B
HIS
105
n
85
HIS
105
B
ILE
106
n
86
ILE
106
B
ILE
107
n
87
ILE
107
B
VAL
108
n
88
VAL
108
B
ALA
109
n
89
ALA
109
B
CYS
110
n
90
CYS
110
B
GLU
111
n
91
GLU
111
B
GLY
112
n
92
GLY
112
B
ASN
113
n
93
ASN
113
B
PRO
114
n
94
PRO
114
B
TYR
115
n
95
TYR
115
B
VAL
116
n
96
VAL
116
B
PRO
117
n
97
PRO
117
B
VAL
118
n
98
VAL
118
B
HIS
119
n
99
HIS
119
B
PHE
120
n
100
PHE
120
B
ASP
121
n
101
ASP
121
B
ALA
122
n
102
ALA
122
B
SER
123
n
103
SER
123
B
VAL
124
n
104
VAL
124
B
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
1740
-21
6360
5400
-47
10790
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
B
O
PHE
46
B
O
PHE
26
B
N
THR
82
B
N
THR
62
B
O
ARG
85
B
O
ARG
65
B
N
LYS
98
B
N
LYS
78
B
N
VAL
63
B
N
VAL
43
B
O
CYS
72
B
O
CYS
52
B
N
TYR
73
B
N
TYR
53
B
O
VAL
108
B
O
VAL
88
B
N
GLU
111
B
N
GLU
91
B
O
VAL
116
B
O
VAL
96
1
B
SER
21
B
SER
1
1
Y
1
B
SER
22
B
SER
2
1
Y
1
B
SER
23
B
SER
3
1
Y
1
B
B
O2
O
SO4
HOH
125
236
1.64
1
B
B
O
O
HOH
HOH
215
236
1.90
1
B
B
O
O
HOH
HOH
240
240
1.37
1_555
4_555
1
B
ARG
39
174.51
166.08
1
B
HIS
48
-102.85
57.76
1
B
GLN
60
-102.93
-144.79
1
B
ASN
71
-99.00
37.24
1
B
ALA
122
174.93
178.29
21.0
.00
.00
.00
.00
.00
.00
0.296
.013
0.213
0.213
2.25
10.00
510
6172
5577
10.7
83.8
RANDOM
10000000.00
.00
1
RESTRAINED
THROUGHOUT
1.0
MOLECULAR REPLACEMENT
.41
.27
3.80
.22
.29
2.25
10.00
129
1274
5
0
1140
0.007
1.2
28.2
.54
2.49
1.50
3.88
2.00
6.25
2.00
10.62
2.50
0.291
.036
0.274
2.37
67
498
7
11.9
70.9
26.2
2.1
10
1J7Z
6172
2.0
25.0
0.111
1
5
100
2.1
2.2
3
100
data scaling
XDS
data reduction
XDS
model building
X-PLOR
refinement
X-PLOR
3.851
phasing
X-PLOR
RIBONUCLEASE PANCREATIC (E.C.3.1.27.5)
Osmolyte Stabilization of Ribonuclease
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
THR
3
A
THR
3
HELX_P
A
MET
13
A
MET
13
1
1
11
B
ASN
24
B
ASN
4
HELX_P
B
ARG
33
B
ARG
13
1
2
10
B
SER
50
B
SER
30
HELX_P
B
ALA
56
B
ALA
36
1
3
7
B
VAL
57
B
VAL
37
HELX_P
B
GLN
60
B
GLN
40
5
4
4
disulf
2.024
B
CYS
26
B
SG
CYS
6
1_555
B
CYS
84
B
SG
CYS
64
1_555
disulf
2.026
B
CYS
40
B
SG
CYS
20
1_555
B
CYS
95
B
SG
CYS
75
1_555
disulf
2.032
B
CYS
58
B
SG
CYS
38
1_555
B
CYS
110
B
SG
CYS
90
1_555
disulf
2.027
B
CYS
65
B
SG
CYS
45
1_555
B
CYS
72
B
SG
CYS
52
1_555
covale
1.337
A
SER
15
A
C
SER
15
1_555
A
NH2
16
A
N
NH2
16
1_555
HYDROLASE
OSMOLYTE SOAKING, SARCOSINE, TRIMETHYLAMINE-N-OXIDE, BETAINE, TAURINE, HYDROLASE
B
TYR
92
B
TYR
72
1
B
PRO
93
B
PRO
73
-0.40
B
ASN
113
B
ASN
93
1
B
PRO
114
B
PRO
94
0.54
RNAS1_BOVIN
UNP
1
27
P61823
KETAAAKFERQHMDS
RNAS1_BOVIN
UNP
2
47
P61823
SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTT
QANKHIIVACEGNPYVPVHFDASV
27
41
1J7Z
1
15
P61823
A
1
1
15
47
150
1J7Z
21
124
P61823
B
2
1
104
1
AMIDATION
NH2
16
1J7Z
A
P61823
UNP
16
3
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
B
VAL
43
B
VAL
23
B
VAL
47
B
VAL
27
B
MET
79
B
MET
59
B
GLU
86
B
GLU
66
B
TYR
97
B
TYR
77
B
LYS
104
B
LYS
84
B
LYS
61
B
LYS
41
B
VAL
63
B
VAL
43
B
CYS
72
B
CYS
52
B
GLN
74
B
GLN
54
B
ILE
106
B
ILE
86
B
GLU
111
B
GLU
91
B
VAL
116
B
VAL
96
B
SER
123
B
SER
103
BINDING SITE FOR RESIDUE SO4 B 125
Software
6
A
HIS
12
A
HIS
12
6
1_555
B
HIS
119
B
HIS
99
6
1_555
B
PHE
120
B
PHE
100
6
1_555
B
HOH
215
E
HOH
6
1_555
B
HOH
236
E
HOH
6
1_555
B
HOH
249
E
HOH
6
1_555
152
P 31 2 1