0.016290
0.000000
0.000000
0.000000
0.016290
0.000000
0.000000
0.000000
0.012390
0.00000
0.00000
0.00000
Shirai, T.
Matsui, Y.
Shionyu-Mitsuyama, C.
Yamane, T.
Kamiya, H.
Ishii, C.
Ogawa, T.
Muramoto, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
61.400
61.400
80.700
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-glucopyranose
beta-D-glucose; D-glucose; glucose
D-saccharide, beta linking
C6 H12 O6
180.156
beta-D-galactopyranose
beta-D-galactose; D-galactose; galactose
D-saccharide, beta linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
R
C
N
75
S
C
N
76
S
C
N
77
R
C
N
78
N
C
N
79
R
C
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
R
C
N
99
R
C
N
100
S
C
N
101
R
C
N
102
R
C
N
103
N
C
N
104
N
O
N
105
N
O
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
O
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
N
N
123
S
C
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
O
N
130
N
N
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
N
N
143
S
C
N
144
N
C
N
145
N
O
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
N
N
162
N
C
N
163
N
C
N
164
N
O
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
N
C
Y
176
N
C
Y
177
N
N
Y
178
N
C
Y
179
N
C
Y
180
N
N
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
N
N
196
S
C
N
197
N
C
N
198
N
O
N
199
S
C
N
200
N
C
N
201
N
C
N
202
N
C
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
C
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
N
N
240
S
C
N
241
N
C
N
242
N
O
N
243
N
C
N
244
N
C
N
245
N
C
N
246
N
C
N
247
N
N
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
N
269
N
C
N
270
N
S
N
271
N
C
N
272
N
O
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
O
N
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
N
295
N
O
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
N
312
N
C
N
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
N
329
N
O
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
R
C
N
343
N
O
N
344
N
C
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
N
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
N
393
N
O
N
394
N
O
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
N
N
407
S
C
N
408
N
C
N
409
N
O
N
410
N
C
N
411
N
C
N
412
N
C
N
413
N
O
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
Y
175
N
sing
Y
176
N
doub
Y
177
N
doub
N
178
N
sing
Y
179
N
sing
N
180
N
sing
Y
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
Y
283
N
doub
Y
284
N
sing
Y
285
N
sing
N
286
N
sing
Y
287
N
doub
N
288
N
sing
Y
289
N
doub
N
290
N
sing
Y
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
Y
352
N
doub
Y
353
N
sing
Y
354
N
sing
N
355
N
sing
Y
356
N
doub
Y
357
N
sing
Y
358
N
sing
N
359
N
sing
Y
360
N
sing
Y
361
N
doub
N
362
N
sing
Y
363
N
doub
N
364
N
sing
Y
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
doub
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
Y
380
N
doub
Y
381
N
sing
Y
382
N
sing
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
doub
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
321
879
889
10.1016/S0022-2836(02)00700-3
12206768
Crystal Structure of a Conger Eel Galectin (Congerin II) at 1.45 A Resolution: Implication for the Accelerated Evolution of a New Ligand-Binding Site Following Gene Duplication
2002
10.2210/pdb1is4/pdb
pdb_00001is4
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
291.0
1
IMAGE PLATE
2000-01-01
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU RU300
15354.119
CONGERIN II
1
man
polymer
342.297
beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
1
man
branched
18.015
water
91
nat
water
BETA-GALACTOSIDE-BINDING LECTIN 2
beta-lactose
no
no
SDRAEVRNIPFKLGMYLTVGGVVNSNATRFSINVGESTDSIAMHMDHRFSYGADQNVLVLNSLVHNVGWQQEERSKKFPF
TKGDHFQTTITFDTHTFYIQLSNGETVEFPNRNKDAAFNLIYLAGDARLTFVRLE
SDRAEVRNIPFKLGMYLTVGGVVNSNATRFSINVGESTDSIAMHMDHRFSYGADQNVLVLNSLVHNVGWQQEERSKKFPF
TKGDHFQTTITFDTHTFYIQLSNGETVEFPNRNKDAAFNLIYLAGDARLTFVRLE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
whitespotted conger
Conger
Escherichia
sample
7943
Conger myriaster
562
Escherichia coli
JM109
PLASMID
PTV118N
1
2.48
50.33
VAPOR DIFFUSION, HANGING DROP
6.5
magnesium sulfate, sodium citrate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
atom_site
chem_comp
entity
entity_name_com
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_molecule_features
pdbx_nonpoly_scheme
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Atomic model
Data collection
Derived calculations
Non-polymer description
Structure summary
Data collection
Database references
Structure summary
1
0
2002-09-18
1
1
2008-04-27
1
2
2011-07-13
2
0
2020-07-29
2
1
2023-12-27
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.type
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
LAT
401
n
B
BGC
1
LAT
401
n
B
GAL
2
DGlcpb
b-D-glucopyranose
b-D-Glcp
Glc
DGalpb
b-D-galactopyranose
b-D-Galp
Gal
1C1L contains Lactose-Liganded Congerin I.
1IS3 contains Lactose and 2-(N-MORPHOLINO)-ETHANESULFONIC ACID LIGANDED CONGERIN II.
1IS5 contains Ligand free Congerin II.
1IS6 contains 2-(N-MORPHOLINO)-ETHANESULFONIC ACID-LIGANDED CONGERIN II.
PDBJ
Y
PDBJ
2001-11-12
REL
oligosaccharide
DGalpb1-4DGlcpb1-ROH
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2112h-1b_1-5]/1-2/a4-b1
2
PDB2Glycan
1.1.0
WURCS
[][b-D-Glcp]{[(4+1)][b-D-Galp]{}}
2
PDB-CARE
LINUCS
C1
O4
GAL
BGC
2
1
2
O1
HO4
sing
n
n
HOH
water
Nutrient
oligosaccharide
beta-lactose
Oligosaccharide
HOH
324
3
HOH
HOH
324
A
HOH
501
3
HOH
HOH
501
A
HOH
502
3
HOH
HOH
502
A
HOH
503
3
HOH
HOH
503
A
HOH
504
3
HOH
HOH
504
A
HOH
505
3
HOH
HOH
505
A
HOH
506
3
HOH
HOH
506
A
HOH
507
3
HOH
HOH
507
A
HOH
508
3
HOH
HOH
508
A
HOH
509
3
HOH
HOH
509
A
HOH
510
3
HOH
HOH
510
A
HOH
511
3
HOH
HOH
511
A
HOH
512
3
HOH
HOH
512
A
HOH
513
3
HOH
HOH
513
A
HOH
514
3
HOH
HOH
514
A
HOH
516
3
HOH
HOH
516
A
HOH
517
3
HOH
HOH
517
A
HOH
518
3
HOH
HOH
518
A
HOH
519
3
HOH
HOH
519
A
HOH
520
3
HOH
HOH
520
A
HOH
525
3
HOH
HOH
525
A
HOH
526
3
HOH
HOH
526
A
HOH
527
3
HOH
HOH
527
A
HOH
528
3
HOH
HOH
528
A
HOH
530
3
HOH
HOH
530
A
HOH
533
3
HOH
HOH
533
A
HOH
535
3
HOH
HOH
535
A
HOH
536
3
HOH
HOH
536
A
HOH
537
3
HOH
HOH
537
A
HOH
539
3
HOH
HOH
539
A
HOH
540
3
HOH
HOH
540
A
HOH
543
3
HOH
HOH
543
A
HOH
545
3
HOH
HOH
545
A
HOH
546
3
HOH
HOH
546
A
HOH
548
3
HOH
HOH
548
A
HOH
550
3
HOH
HOH
550
A
HOH
551
3
HOH
HOH
551
A
HOH
552
3
HOH
HOH
552
A
HOH
553
3
HOH
HOH
553
A
HOH
555
3
HOH
HOH
555
A
HOH
556
3
HOH
HOH
556
A
HOH
557
3
HOH
HOH
557
A
HOH
559
3
HOH
HOH
559
A
HOH
560
3
HOH
HOH
560
A
HOH
561
3
HOH
HOH
561
A
HOH
562
3
HOH
HOH
562
A
HOH
563
3
HOH
HOH
563
A
HOH
564
3
HOH
HOH
564
A
HOH
565
3
HOH
HOH
565
A
HOH
566
3
HOH
HOH
566
A
HOH
567
3
HOH
HOH
567
A
HOH
568
3
HOH
HOH
568
A
HOH
569
3
HOH
HOH
569
A
HOH
570
3
HOH
HOH
570
A
HOH
572
3
HOH
HOH
572
A
HOH
573
3
HOH
HOH
573
A
HOH
574
3
HOH
HOH
574
A
HOH
575
3
HOH
HOH
575
A
HOH
576
3
HOH
HOH
576
A
HOH
577
3
HOH
HOH
577
A
HOH
578
3
HOH
HOH
578
A
HOH
580
3
HOH
HOH
580
A
HOH
582
3
HOH
HOH
582
A
HOH
583
3
HOH
HOH
583
A
HOH
586
3
HOH
HOH
586
A
HOH
587
3
HOH
HOH
587
A
HOH
588
3
HOH
HOH
588
A
HOH
590
3
HOH
HOH
590
A
HOH
593
3
HOH
HOH
593
A
HOH
594
3
HOH
HOH
594
A
HOH
595
3
HOH
HOH
595
A
HOH
598
3
HOH
HOH
598
A
HOH
599
3
HOH
HOH
599
A
HOH
605
3
HOH
HOH
605
A
HOH
606
3
HOH
HOH
606
A
HOH
609
3
HOH
HOH
609
A
HOH
611
3
HOH
HOH
611
A
HOH
617
3
HOH
HOH
617
A
HOH
621
3
HOH
HOH
621
A
HOH
625
3
HOH
HOH
625
A
HOH
627
3
HOH
HOH
627
A
HOH
628
3
HOH
HOH
628
A
HOH
629
3
HOH
HOH
629
A
HOH
631
3
HOH
HOH
631
A
HOH
635
3
HOH
HOH
635
A
HOH
637
3
HOH
HOH
637
A
HOH
640
3
HOH
HOH
640
A
HOH
641
3
HOH
HOH
641
A
HOH
642
3
HOH
HOH
642
A
HOH
645
3
HOH
HOH
645
A
HOH
647
3
HOH
HOH
647
A
n
1
1
A
ASP
2
n
2
ASP
2
A
ARG
3
n
3
ARG
3
A
ALA
4
n
4
ALA
4
A
GLU
5
n
5
GLU
5
A
VAL
6
n
6
VAL
6
A
ARG
7
n
7
ARG
7
A
ASN
8
n
8
ASN
8
A
ILE
9
n
9
ILE
9
A
PRO
10
n
10
PRO
10
A
PHE
11
n
11
PHE
11
A
LYS
12
n
12
LYS
12
A
LEU
13
n
13
LEU
13
A
GLY
14
n
14
GLY
14
A
MET
15
n
15
MET
15
A
TYR
16
n
16
TYR
16
A
LEU
17
n
17
LEU
17
A
THR
18
n
18
THR
18
A
VAL
19
n
19
VAL
19
A
GLY
20
n
20
GLY
20
A
GLY
21
n
21
GLY
21
A
VAL
22
n
22
VAL
22
A
VAL
23
n
23
VAL
23
A
ASN
24
n
24
ASN
24
A
SER
25
n
25
SER
25
A
ASN
26
n
26
ASN
26
A
ALA
27
n
27
ALA
27
A
THR
28
n
28
THR
28
A
ARG
29
n
29
ARG
29
A
PHE
30
n
30
PHE
30
A
SER
31
n
31
SER
31
A
ILE
32
n
32
ILE
32
A
ASN
33
n
33
ASN
33
A
VAL
34
n
34
VAL
34
A
GLY
35
n
35
GLY
35
A
GLU
36
n
36
GLU
36
A
SER
37
n
37
SER
37
A
THR
38
n
38
THR
38
A
ASP
39
n
39
ASP
39
A
SER
40
n
40
SER
40
A
ILE
41
n
41
ILE
41
A
ALA
42
n
42
ALA
42
A
MET
43
n
43
MET
43
A
HIS
44
n
44
HIS
44
A
MET
45
n
45
MET
45
A
ASP
46
n
46
ASP
46
A
HIS
47
n
47
HIS
47
A
ARG
48
n
48
ARG
48
A
PHE
49
n
49
PHE
49
A
SER
50
n
50
SER
50
A
TYR
51
n
51
TYR
51
A
GLY
52
n
52
GLY
52
A
ALA
53
n
53
ALA
53
A
ASP
54
n
54
ASP
54
A
GLN
55
n
55
GLN
55
A
ASN
56
n
56
ASN
56
A
VAL
57
n
57
VAL
57
A
LEU
58
n
58
LEU
58
A
VAL
59
n
59
VAL
59
A
LEU
60
n
60
LEU
60
A
ASN
61
n
61
ASN
61
A
SER
62
n
62
SER
62
A
LEU
63
n
63
LEU
63
A
VAL
64
n
64
VAL
64
A
HIS
65
n
65
HIS
65
A
ASN
66
n
66
ASN
66
A
VAL
67
n
67
VAL
67
A
GLY
68
n
68
GLY
68
A
TRP
69
n
69
TRP
69
A
GLN
70
n
70
GLN
70
A
GLN
71
n
71
GLN
71
A
GLU
72
n
72
GLU
72
A
GLU
73
n
73
GLU
73
A
ARG
74
n
74
ARG
74
A
SER
75
n
75
SER
75
A
LYS
76
n
76
LYS
76
A
LYS
77
n
77
LYS
77
A
PHE
78
n
78
PHE
78
A
PRO
79
n
79
PRO
79
A
PHE
80
n
80
PHE
80
A
THR
81
n
81
THR
81
A
LYS
82
n
82
LYS
82
A
GLY
83
n
83
GLY
83
A
ASP
84
n
84
ASP
84
A
HIS
85
n
85
HIS
85
A
PHE
86
n
86
PHE
86
A
GLN
87
n
87
GLN
87
A
THR
88
n
88
THR
88
A
THR
89
n
89
THR
89
A
ILE
90
n
90
ILE
90
A
THR
91
n
91
THR
91
A
PHE
92
n
92
PHE
92
A
ASP
93
n
93
ASP
93
A
THR
94
n
94
THR
94
A
HIS
95
n
95
HIS
95
A
THR
96
n
96
THR
96
A
PHE
97
n
97
PHE
97
A
TYR
98
n
98
TYR
98
A
ILE
99
n
99
ILE
99
A
GLN
100
n
100
GLN
100
A
LEU
101
n
101
LEU
101
A
SER
102
n
102
SER
102
A
ASN
103
n
103
ASN
103
A
GLY
104
n
104
GLY
104
A
GLU
105
n
105
GLU
105
A
THR
106
n
106
THR
106
A
VAL
107
n
107
VAL
107
A
GLU
108
n
108
GLU
108
A
PHE
109
n
109
PHE
109
A
PRO
110
n
110
PRO
110
A
ASN
111
n
111
ASN
111
A
ARG
112
n
112
ARG
112
A
ASN
113
n
113
ASN
113
A
LYS
114
n
114
LYS
114
A
ASP
115
n
115
ASP
115
A
ALA
116
n
116
ALA
116
A
ALA
117
n
117
ALA
117
A
PHE
118
n
118
PHE
118
A
ASN
119
n
119
ASN
119
A
LEU
120
n
120
LEU
120
A
ILE
121
n
121
ILE
121
A
TYR
122
n
122
TYR
122
A
LEU
123
n
123
LEU
123
A
ALA
124
n
124
ALA
124
A
GLY
125
n
125
GLY
125
A
ASP
126
n
126
ASP
126
A
ALA
127
n
127
ALA
127
A
ARG
128
n
128
ARG
128
A
LEU
129
n
129
LEU
129
A
THR
130
n
130
THR
130
A
PHE
131
n
131
PHE
131
A
VAL
132
n
132
VAL
132
A
ARG
133
n
133
ARG
133
A
LEU
134
n
134
LEU
134
A
GLU
135
n
135
GLU
135
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_556
y,x,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
80.7000000000
A
N
PHE
11
A
N
PHE
11
A
O
PHE
118
A
O
PHE
118
A
O
ALA
124
A
O
ALA
124
A
N
SER
31
A
N
SER
31
A
N
PHE
30
A
N
PHE
30
A
O
HIS
47
A
O
HIS
47
A
N
ASP
46
A
N
ASP
46
A
O
VAL
59
A
O
VAL
59
A
N
VAL
64
A
N
VAL
64
A
O
GLY
68
A
O
GLY
68
A
N
PHE
11
A
N
PHE
11
A
O
PHE
118
A
O
PHE
118
A
O
ALA
124
A
O
ALA
124
A
N
SER
31
A
N
SER
31
A
N
PHE
30
A
N
PHE
30
A
O
HIS
47
A
O
HIS
47
A
N
ASP
46
A
N
ASP
46
A
O
VAL
59
A
O
VAL
59
A
N
LEU
60
A
N
LEU
60
A
O
GLU
73
A
O
GLU
73
A
O
PHE
109
A
O
PHE
109
A
N
PHE
97
A
N
PHE
97
A
O
TYR
98
A
O
TYR
98
A
N
THR
91
A
N
THR
91
A
O
ILE
90
A
O
ILE
90
A
N
LEU
17
A
N
LEU
17
A
N
GLY
20
A
N
GLY
20
A
O
THR
130
A
O
THR
130
1
A
SER
1
A
SER
1
1
Y
1
-12.94
1.90
110.30
97.36
A
A
A
N
CA
CB
THR
THR
THR
28
28
28
N
1
6.63
0.50
120.30
126.93
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
29
29
29
N
1
-15.57
1.60
100.20
84.63
A
A
A
CG
SD
CE
MET
MET
MET
45
45
45
N
1
6.92
0.80
106.30
113.22
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
69
69
69
N
1
-5.95
0.80
107.30
101.35
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
69
69
69
N
1
12.68
1.90
110.30
122.98
A
A
A
N
CA
CB
THR
THR
THR
91
91
91
N
1
A
A
NE2
CD2
HIS
HIS
85
85
-0.067
0.011
1.373
1.306
N
1
A
A
NE2
CD2
HIS
HIS
95
95
-0.066
0.011
1.373
1.307
N
1
A
ASN
66
59.20
17.53
1
A
VAL
67
-122.51
-57.70
1
A
GLN
70
-98.62
-147.80
1
A
ASP
93
-122.25
-167.51
0.2170000
0.1660000
0.1700000
0.1670000
1.90
8.00
557
12150
11840
4.700
RANDOM
1
3.000
MOLECULAR REPLACEMENT
CONGERIN II- LACTOSE AND MES COMPLEX
Engh & Huber
1.90
8.00
91
1192
23
0
1078
0.013
2.70
26.50
0.90
0.2690000
0.2080000
1.97
48
1029
4.70
1.880
99.000
1IS4
12417
12417
0.000
0.000
0.0820000
1
24.9000
97.1
0.2210000
1.90
1.97
7.700
1159
1
92.7
phasing
AMoRE
refinement
X-PLOR
3.1
data reduction
DENZO
data scaling
SCALEPACK
LACTOSE-LIGANDED CONGERIN II
1
N
N
2
N
N
3
N
N
The second part of the biological assembly is generated by the two fold axis: y, x, -z+1.
covale
1.384
both
sing
B
BGC
1
B
O4
BGC
1_555
B
GAL
2
B
C1
GAL
1_555
SUGAR BINDING PROTEIN
COMPLEX WITH LACTOSE, BETA SANDWICH, SUGAR BINDING PROTEIN
LEG2_CONMY
UNP
1
Q9YIC2
SDRAEVRNIPFKLGMYLTVGGVVNSNATRFSINVGESTDSIAMHMDHRFSYGADQNVLVLNSLVHNVGWQQEERSKKFPF
TKGDHFQTTITFDTHTFYIQLSNGETVEFPNRNKDAAFNLIYLAGDARLTFVRLE
1
135
1IS4
1
135
Q9YIC2
A
1
1
135
6
6
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
4
A
ALA
4
A
LYS
12
A
LYS
12
A
ALA
117
A
ALA
117
A
GLY
125
A
GLY
125
A
ARG
29
A
ARG
29
A
SER
37
A
SER
37
A
SER
40
A
SER
40
A
ARG
48
A
ARG
48
A
VAL
57
A
VAL
57
A
VAL
64
A
VAL
64
A
GLY
68
A
GLY
68
A
TRP
69
A
TRP
69
A
ALA
4
A
ALA
4
A
LYS
12
A
LYS
12
A
ALA
117
A
ALA
117
A
GLY
125
A
GLY
125
A
ARG
29
A
ARG
29
A
SER
37
A
SER
37
A
SER
40
A
SER
40
A
ARG
48
A
ARG
48
A
VAL
57
A
VAL
57
A
VAL
64
A
VAL
64
A
GLU
73
A
GLU
73
A
SER
75
A
SER
75
A
THR
106
A
THR
106
A
PRO
110
A
PRO
110
A
THR
96
A
THR
96
A
GLN
100
A
GLN
100
A
HIS
85
A
HIS
85
A
PHE
92
A
PHE
92
A
LEU
17
A
LEU
17
A
VAL
23
A
VAL
23
A
ALA
127
A
ALA
127
A
LEU
134
A
LEU
134
94
P 42 21 2