4KZ2

Crystal Structure of phi29 pRNA 3WJ Core

Structural Biology Knowledgebase: 4KZ2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.05 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.197

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4KZ2

Classification: RNA

Total Structure Weight: 17335.21

Macromolecule Entities
Molecule Chains Length Organism Details
phi29 pRNA 3WJ core RNA 18 mer A 18 synthetic
phi29 pRNA 3WJ core RNA 20 mer B 20 synthetic
phi29 pRNA 3WJ core RNA 16 mer C 16 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MN
Query on MN

A, B, C MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.05 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.197
  • Space Group: I 4

Unit Cell:

Length (Å) Angle (°)
a = 125.01 α = 90.00
b = 125.01 β = 90.00
c = 26.99 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2013-05-29
  • Released Date: 2013-10-16
  • Deposition author(s): Zhang, H., Endrizzi, J.A., Shu, Y., Haque, F., Sauter, C., Guo, P., Chi, Y.-I.

Revision History

No revisions since initial release