4I33

Crystal structure of HCV NS3/4A R155K protease complexed with compound 4

Structural Biology Knowledgebase: 4I33 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.216

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4I33

Classification: HYDROLASE / HYDROLASE INHIBITOR

Total Structure Weight: 44846.33

Macromolecule Entities
Molecule Chains Length Organism Details
Genome polyprotein A, B 187 Hepatitis c virus EC#: 2.7.7.48 IUBMB 3.4.21.98 IUBMB 3.4.22 IUBMB 3.6.1.15 IUBMB 3.6.4.13 IUBMB
Fragment: NS3 protease domain (UNP Residues 1027-1206)
Mutation: V114I, I132V, R155K
Gene Name(s):
HCV non-structural protein 4A C, D 17 Hepatitis c virus Fragment: NS3 interacting peptide (UNP Residues 1678-1691)
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1BV
Query on 1BV

A, B (2R,6S,7E,10E,13aR,14aR,16aS)-2-{[7-methoxy- 8-methyl-2-(propan-2-yloxy)quinolin-4-yl]oxy}- N-[(1-methylcyclopropyl)sulfonyl]-6-{[(1- methyl-1H-pyrazol-3-yl)carbonyl]amino}-5,16- dioxo-1,2,3,6,9,12,13,13a,14,15,16,16a-dodecahydrocyclopropa[e]pyrrolo[1,2- a][1,4]diazacyclopentadecine-14a(5H)-carboxamide
C41 H51 N7 O9 S
ZHIQOLBHZJFLCW-QVARATBXSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A, B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.216
  • Space Group: P 61
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 93.53 α = 90.00
b = 93.53 β = 90.00
c = 81.45 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-11-23
  • Released Date: 2013-01-02
  • Deposition author(s): Lemke, C.T.

Revision History

  • 2013-03-13
    Type: Citation | Details: Citation update
  • 2013-01-09
    Type: Citation | Details: Citation update