4GBS

Crystal structure of a putative lipoprotein (BF2707) from Bacteroides fragilis NCTC 9343 at 2.75 A resolution

Structural Biology Knowledgebase: 4GBS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.48 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 4GBS

Classification: LIPID BINDING PROTEIN

Total Structure Weight: 46413.64

Macromolecule Entities
Molecule Chains Length Organism Details
Putative lipoprotein A, B 200 Bacteroides fragilis Gene Name(s): BF9343_2622
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
MLY
Query on MLY
A, B L-PEPTIDE LINKING C8 H18 N2 O2 LYS
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 66.01 α = 90.00
b = 66.01 β = 90.00
c = 263.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-27
  • Released Date: 2012-10-10
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

No revisions since initial release