4F7P

Crystal Structure of HLA-A*2402 Complexed with a Newly Identified Peptide from 2009H1N1 PB1 (496-505)

Structural Biology Knowledgebase: 4F7P SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.185

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4F7P

Classification: IMMUNE SYSTEM

Total Structure Weight: 44847.26

Macromolecule Entities
Molecule Chains Length Organism Details
HLA class I histocompatibility antigen, A-24 alpha chain A 275 Homo sapiens Fragment: unp residues 25-298
Gene Name(s): HLA-A Gene View HLAA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Beta-2-microglobulin B 100 Homo sapiens Fragment: unp residues 21-119
Gene Name(s): B2M Gene View CDABP0092 HDCMA22P
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
RNA-directed RNA polymerase catalytic subunit C 10 Influenza a virus EC#: 2.7.7.48 IUBMB
Fragment: unp residues 496-505
Gene Name(s): PB1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.185
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 162.12 α = 90.00
b = 64.79 β = 90.04
c = 50.23 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-16
  • Released Date: 2012-10-10
  • Deposition author(s): Liu, J., Zhang, S., Tan, S., Yi, Y., Wu, B., Zhu, F., Wang,H., Qi, J., Gao, G.F.

Revision History

  • 2012-12-05
    Type: Citation | Details: Citation update