4DVF

Crystal structure of BACE1 with its inhibitor

Structural Biology Knowledgebase: 4DVF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.207

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DVF

Classification: HYDROLASE / HYDROLASE INHIBITOR

Total Structure Weight: 98467.30

Macromolecule Entities
Molecule Chains Length Organism Details
Beta-secretase 1 A, B 433 Homo sapiens EC#: 3.4.23.46 IUBMB 4.3.1.23 IUBMB
Fragment: UNP residues 43-454
Mutation: K75A, E77A
Gene Name(s): BACE1 Gene View BACE KIAA1149
METHYL (2S)-1-[(2R,5S,8S,12S,13S)-2,13-DIBENZYL-12-HYDROXY-3,5-DIMETHYL-8-(2-METHYLPROPYL)-15-(3-[(METHYLSULFONYL)AMINO]-5-{[(1R)-1-PHENYLETHYL]CARBAMOYL}PHENYL)-4,7,10,15-TETRAOXO-3,6,9,14-TETRAAZAPENTADECAN-1-OYL]PYRROLIDINE-2-CARBOXYLATE C, D 7 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.207
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 59.57 α = 90.00
b = 85.82 β = 90.00
c = 176.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-02-23
  • Released Date: 2013-01-16
  • Deposition author(s): Xu, Y.C., Chen, W.Y., Li, L., Chen, T.T.

Revision History

No revisions since initial release