4DME

GCN4 leucine zipper domain in a trimeric oligomerization state

Structural Biology Knowledgebase: 4DME SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.226

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DME

Classification: PROTEIN BINDING

Total Structure Weight: 12377.41

Macromolecule Entities
Molecule Chains Length Organism Details
GCN4-p1 leucine zipper domain A, B, C 35 Synthetic construct

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
A, B, C NON-POLYMER C2 H4 O --
NH2
Query on NH2
A, B, C NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.226
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 61.18 α = 90.00
b = 34.38 β = 139.68
c = 78.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-02-07
  • Released Date: 2012-11-14
  • Deposition author(s): Oshaben, K.M., Salari, R., Chong, L.T., Horne, W.S.

Revision History

  • 2012-12-12
    Type: Citation | Details: Citation update