4DLI

Human p38 MAP kinase in complex with RL87

Structural Biology Knowledgebase: 4DLI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.215

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DLI

Classification: Transferase / Transferase Inhibitor

Total Structure Weight: 41822.14

Macromolecule Entities
Molecule Chains Length Organism Details
Mitogen-activated protein kinase 14 A 360 Homo sapiens EC#: 2.7.11.24 IUBMB
Gene Name(s): MAPK14 Gene View CSBP CSBP1 CSBP2 CSPB1 MXI2 SAPK2A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IRG
Query on IRG

A N~4~-cyclopropyl-2-phenylquinazoline-4,7- diamine
C17 H16 N4
WCANXWUISJCJOB-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
IRG N/A in BindingDB
Kd: 2400 nM  BindingMOAD
Kd: 2400 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.215
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 66.26 α = 90.00
b = 74.22 β = 90.00
c = 77.92 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-02-06
  • Released Date: 2013-01-23
  • Deposition author(s): Gruetter, C., Getlik, M., Simard, J.R., Rauh, D.

Revision History

No revisions since initial release