4DC8

Crystal Structure of Myoglobin Unexposed to Excessive SONICC Imaging Laser Dose.

Structural Biology Knowledgebase: 4DC8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.183

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DC8

Classification: OXYGEN STORAGE

Total Structure Weight: 17831.30

Macromolecule Entities
Molecule Chains Length Organism Details
Myoglobin A 152 Equus caballus Gene Name(s): MB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.183
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 35.36 α = 90.00
b = 28.79 β = 106.05
c = 63.06 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-17
  • Released Date: 2013-01-23
  • Deposition author(s): Becker, M., Mulichak, A.M., Kissick, D.J., Fischetti, R.F., Keefe, L.J., Simpson, D.J.

Revision History

  • 2013-05-15
    Type: Citation | Details: Citation update