NMR Ensemble

4BY9

The structure of the Box CD enzyme reveals regulation of rRNA methylation

Structural Biology Knowledgebase: 4BY9 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria:

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4BY9

Classification: TRANSFERASE / RNA

Total Structure Weight: 385924.78


Macromolecule Entities
Molecule Chains Length Organism Details
NOP5/NOP56 RELATED PROTEIN C, F, I, L 366 Pyrococcus furiosus Fragment: RESIDUES 4-369
Gene Name(s): PF0060
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S RIBOSOMAL PROTEIN L7AE D, G, J, M 121 Pyrococcus furiosus Fragment: RESIDUES 3-123
Gene Name(s): rpl7ae PF1367
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
FIBRILLARIN-LIKE RRNA/TRNA 2'-O-METHYLTRANSFERASE E, H, K, N 227 Pyrococcus furiosus EC#: 2.1.1 IUBMB
Gene Name(s): flpA PF0059
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
SSR26 A, B 72 Pyrococcus furiosus
5'-R(*UP*CP*GP*CP*CP*CP*AP*UP*CP*AP*CP)-3' W, X, Y, Z 11 Pyrococcus furiosus


Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: --

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-07-18
  • Released Date: 2013-10-09
  • Deposition author(s): Lapinaite, A., Simon, B., Skjaerven, L., Rakwalska-Bange, M., Gabel, F., Carlomagno, T.

Revision History

  • 2016-05-04
    Type: Other | Details: TER, MASTER
  • 2016-05-04
    Type: Atom nomenclature | Details: ATOM
  • 2013-10-30
    Type: Citation | Details: JRNL
  • 2013-10-23
    Type: Citation | Details: JRNL
  • 2013-10-16
    Type: Atom nomenclature | Details: ATOM