4ALW

Benzofuropyrimidinone Inhibitors of Pim-1

Structural Biology Knowledgebase: 4ALW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.92 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.155

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4ALW

Classification: TRANSFERASE

Total Structure Weight: 38073.41

Macromolecule Entities
Molecule Chains Length Organism Details
PIM-1 KINASE A 328 Homo sapiens EC#: 2.7.11.1 IUBMB
Fragment: PROTEIN KINASE DOMAIN, RESIDUES 406-717
Gene Name(s): PIM1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HY7
Query on HY7

A 8-BROMANYL-2-[(4-METHYLPIPERAZIN-1-YL)METHYL]- 3H-[1]BENZOFURO[3,2-D]PYRIMIDIN-4-ONE
C16 H17 Br N4 O2
OOINHKLROPYETD-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IMD
Query on IMD

A IMIDAZOLE
C3 H5 N2
RAXXELZNTBOGNW-UHFFFAOYSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
HY7 IC50: 27 nM (99) BindingDB

IC50: 27 nM  BindingMOAD
IC50: 27 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.92 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.155
  • Space Group: P 65
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 97.45 α = 90.00
b = 97.45 β = 90.00
c = 81.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-05
  • Released Date: 2013-01-16
  • Deposition author(s): Stout, T.J., Adams, L.

Revision History

No revisions since initial release