4AIP

The FrpB iron transporter from Neisseria meningitidis (F3-3 variant)

Structural Biology Knowledgebase: 4AIP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.242

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AIP

Classification: TRANSPORT PROTEIN

Total Structure Weight: 247823.00

Macromolecule Entities
Molecule Chains Length Organism Details
FE-REGULATED PROTEIN B A, B, C 742 Neisseria meningitidis Mutation: E197N, V446I
Gene Name(s): frpB

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
N8E
Query on N8E

A, B 3,6,9,12,15-PENTAOXATRICOSAN-1-OL
N-OCTYLPENTAOXYETHYLENE; PENTAETHYLENE GLYCOL MONOOCTYL ETHER; OCTYLPENTAGLYCOL N- OCTYLPENTAOXYETHYLENE (Synonym)
C18 H38 O6
MJELOWOAIAAUJT-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GLU
Query on GLU

A GLUTAMIC ACID
C5 H9 N O4
WHUUTDBJXJRKMK-VKHMYHEASA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.242
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 85.32 α = 90.00
b = 104.62 β = 90.00
c = 269.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-02-11
  • Released Date: 2013-01-23
  • Deposition author(s): Saleem, M., Prince, S.M., Derrick, J.P.

Revision History

  • 2013-04-03
    Type: Citation | Details: JRNL
  • 2013-03-06
    Type: Entry authorship | Details: AUTHOR
  • 2013-03-06
    Type: Citation | Details: JRNL