3ZDL

Vinculin head (1-258) in complex with a RIAM fragment

Structural Biology Knowledgebase: 3ZDL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZDL

Classification: CELL ADHESION

Total Structure Weight: 34867.25

Macromolecule Entities
Molecule Chains Length Organism Details
VINCULIN A 280 Gallus gallus Fragment: VD1 DOMAIN, RESIDUES 1-259
Gene Name(s): VCL Gene View VINC1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 1-INTERACTING PROTEIN B 32 Homo sapiens Fragment: N TERMINAL DOMAIN, RESIUDES 1-32
Mutation: P32Y
Gene Name(s): APBB1IP Gene View PREL1 RARP1 RIAM
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.188
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 51.73 α = 90.00
b = 70.03 β = 90.00
c = 95.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-11-28
  • Released Date: 2013-02-13
  • Deposition author(s): Zacharchenko, T., Elliott, P.R., Goult, B.T., Bate, N., Critchely, D.R., Barsukov, I.L.

Revision History

  • 2013-04-17
    Type: Citation | Details: JRNL
  • 2013-04-10
    Type: Other | Details: REMARK 280
  • 2013-04-10
    Type: Biological assembly | Details: REMARK 350
  • 2013-03-06
    Type: Other | Details: REMARK 280
  • 2013-03-06
    Type: Biological assembly | Details: REMARK 350
  • 2013-02-20
    Type: Citation | Details: JRNL