3W06

Crystal structure of Arabidopsis thaliana DWARF14 Like (AtD14L)

Structural Biology Knowledgebase: 3W06 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.162
  • R-Value Work: 0.132

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3W06

Classification: HYDROLASE

Total Structure Weight: 30342.69

Macromolecule Entities
Molecule Chains Length Organism Details
Hydrolase, alpha/beta fold family protein A 272 Arabidopsis thaliana Gene Name(s): KAI2 D14L HTL At4g37470 F6G17.120

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.162
  • R-Value Work: 0.132
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 50.95 α = 90.00
b = 55.60 β = 115.81
c = 53.13 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-10-19
  • Released Date: 2013-01-23
  • Deposition author(s): Kagiyama, M., Hirano, Y., Mori, T., Kim, S.Y., Kyozuka, J., Seto, Y., Yamaguchi, S., Hakoshima, T.

Revision History

  • 2013-02-06
    Type: Citation | Details: Citation update