3NUP

CDK6 (monomeric) in complex with inhibitor

Structural Biology Knowledgebase: 3NUP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.238

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3NUP

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 35319.93

Macromolecule Entities
Molecule Chains Length Organism Details
Cell division protein kinase 6 A 307 Homo sapiens EC#: 2.7.11.22 IUBMB
Fragment: UNP residues 1-301
Gene Name(s): CDK6 Gene View CDKN6
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3NU
Query on 3NU

A 4-[3-(1-methylethyl)-1H-pyrazol-4-yl]-N-(1- methylpiperidin-4-yl)pyrimidin-2-amine
4-(3-isopropyl-1H-pyrazol-4-yl)-N-(1-methylpiperidin- 4-yl)pyrimidin-2-amine (Synonym)
C16 H24 N6
YVKZWLZGQQCODL-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.238
  • Space Group: I 4
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 101.78 α = 90.00
b = 101.78 β = 90.00
c = 59.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-07-07
  • Released Date: 2010-12-22
  • Deposition author(s): Chopra, R

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4