2VI1

ATOMIC RESOLUTION (1.04 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM D-TARTRATE AT 22 C.

Structural Biology Knowledgebase: 2VI1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.04 Å
  • R-Value Free: 0.140
  • R-Value Work: 0.128

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2VI1

Classification: PLANT PROTEIN

Total Structure Weight: 22503.44

Macromolecule Entities
Molecule Chains Length Organism Details
THAUMATIN-1 A 207 Thaumatococcus daniellii Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.04 Å
  • R-Value Free: 0.140
  • R-Value Work: 0.128
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 50.94 α = 90.00
b = 54.30 β = 90.00
c = 70.81 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-11-26
  • Released Date: 2009-02-10
  • Deposition author(s): Jakoncic, J., Asherie, N., Ginsberg, C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4