1WCC

screening for fragment binding by X-ray crystallography

Structural Biology Knowledgebase: 1WCC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.177

Literature

Macromolecules
Sequence Display for 1WCC

Classification: TRANSFERASE

Total Structure Weight: 34106.36

Macromolecule Entities
Molecule Chains Length Organism Details
CELL DIVISION PROTEIN KINASE 2 A 298 Homo sapiens EC#: 2.7.11.22 IUBMB
Gene Name(s): CDK2 Gene View CDKN2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CIG
Query on CIG

A 2-AMINO-6-CHLOROPYRAZINE
C4 H4 Cl N3
JTPXVCKCLBROOJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
CIG IC50: 350000 nM (100) BindingDB

IC50: 350000 nM  BindingMOAD
IC50: 350000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.177
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 53.27 α = 90.00
b = 71.71 β = 90.00
c = 72.21 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-11-12
  • Released Date: 2005-01-27
  • Deposition author(s): Cleasby, A., O'Reilly, M., Hartshorn, M.J., Murray, C.W., Tickle, I.J., Jhoti, H., Frederickson, M.

Revision History

  • 2012-02-01
    Type: Biological assembly | Details: REMARK 350
  • 2012-02-01
    Type: Atom nomenclature | Details: ATOM,HETATM
  • 2012-02-01
    Type: Version format compliance | Details: REMARK 4