1UKI

Structural basis for the selective inhibition of JNK1 by the scaffolding protein JIP1 and SP600125

Structural Biology Knowledgebase: 1UKI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.216

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1UKI

Classification: TRANSFERASE

Total Structure Weight: 44154.43

Macromolecule Entities
Molecule Chains Length Organism Details
mitogen-activated protein kinase 8 isoform 4 A 369 Homo sapiens EC#: 2.7.11.24 IUBMB
Fragment: residues 1-369
Gene Name(s): MAPK8 Gene View JNK1 PRKM8 SAPK1 SAPK1C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
11-mer peptide from C-jun-amino-terminal kinase interacting protein 1 B 11 Mus musculus Gene Name(s): Mapk8ip1 Ib1 Jip1 Mapk8ip Prkm8ip
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
537
Query on 537

A 2,6-DIHYDROANTHRA/1,9-CD/PYRAZOL-6-ONE
C14 H8 N2 O
ACPOUJIDANTYHO-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
537 IC50: 40 - 14000 nM (85 - 97) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.216
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 61.70 α = 90.00
b = 79.46 β = 90.00
c = 82.86 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-08-23
  • Released Date: 2004-08-30
  • Deposition author(s): Heo, Y.-S., Kim, Y.K., Sung, B.-J., Lee, H.S., Lee, J.I., Seo, C.I., Park, S.-Y., Kim, J.H., Hyun, Y.-L., Jeon, Y.H., Ro, S., Lee, T.G., Cho, J.M., Hwang, K.Y., Yang, C.-H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4