1SDL

CROSS-LINKED, CARBONMONOXY HEMOGLOBIN A

Structural Biology Knowledgebase: 1SDL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Work: 0.150

Literature

Macromolecules
Sequence Display for 1SDL

Classification: OXYGEN TRANSPORT

Total Structure Weight: 64869.87

Macromolecule Entities
Molecule Chains Length Organism Details
HEMOGLOBIN A A, C 141 Homo sapiens Details: CROSS-LINKED, CARBONMONOXY
Gene Name(s): HBA1 Gene View HBA2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HEMOGLOBIN A B, D 146 Homo sapiens Details: CROSS-LINKED, CARBONMONOXY
Gene Name(s): HBB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B, C, D PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TMM
Query on TMM

D 1,3,5-BENZENETRICARBOXYLIC ACID
C9 H6 O6
QMKYBPDZANOJGF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CMO
Query on CMO

A, B, C, D CARBON MONOXIDE
C O
UGFAIRIUMAVXCW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Observed:
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 104.43 α = 90.00
b = 72.16 β = 108.25
c = 88.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-02-26
  • Released Date: 1996-08-01
  • Deposition author(s): Schumacher, M.A., Dixon, M.M., Kluger, R., Jones, R.T., Brennan, R.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4